Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.toxicon.2022.107006 http://hdl.handle.net/11449/246578 |
Resumo: | The genus Odontomachus is widely distributed in neotropical areas throughout Central and South America. It is a stinging ant that subdues its prey (insects) by injecting them a cocktail of toxic molecules (venom). Ant venoms are generally composed of formic acid, alkaloids, hydrocarbons, amines, peptides, and proteins. Odontomachus chelifer is an ant that inhabits neotropical regions from Mexico to Argentina. Unlike the venom of other animals such as scorpions, spiders and snakes, this ant venom has seldom been analyzed comprehensively, and their compositions are not yet completely known. In the present study, we performed a partial investigation of enzymatic and functional activities of O. chelifer ant venom, and we provide a global insight on the transcripts expressed in the venom gland to better understand their properties. The crude venom showed phospholipase A2 and antiparasitic activities. RNA sequencing (Illumina platform) of the venom gland of O. chelifer generated 61, 422, 898 reads and de novo assembly Trinity generated 50,220 contigs. BUSCO analysis against Arthropoda_db10 showed that 92.89% of the BUSCO groups have complete gene representation (single-copy or duplicated), while 4.05% are only partially recovered, and 3.06% are missing. The 30 most expressed genes in O. chelifer venom gland transcriptome included important transcripts involved in venom function such as U-poneritoxin (01)-Om1a-like (pilosulin), chitinase 2, venom allergen 3, chymotrypsin 1 and 2 and glutathione S-transferase. Analysis of the molecular function revealed that the largest number of transcripts were related to catalytic activity, including phospholipases. These data emphasize the potential of O. chelifer venom for prospection of molecules with biotechnological application. |
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Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus cheliferAnt venomAnti-parasiteOdontomachus cheliferPhospholipasesTranscriptomic analysisThe genus Odontomachus is widely distributed in neotropical areas throughout Central and South America. It is a stinging ant that subdues its prey (insects) by injecting them a cocktail of toxic molecules (venom). Ant venoms are generally composed of formic acid, alkaloids, hydrocarbons, amines, peptides, and proteins. Odontomachus chelifer is an ant that inhabits neotropical regions from Mexico to Argentina. Unlike the venom of other animals such as scorpions, spiders and snakes, this ant venom has seldom been analyzed comprehensively, and their compositions are not yet completely known. In the present study, we performed a partial investigation of enzymatic and functional activities of O. chelifer ant venom, and we provide a global insight on the transcripts expressed in the venom gland to better understand their properties. The crude venom showed phospholipase A2 and antiparasitic activities. RNA sequencing (Illumina platform) of the venom gland of O. chelifer generated 61, 422, 898 reads and de novo assembly Trinity generated 50,220 contigs. BUSCO analysis against Arthropoda_db10 showed that 92.89% of the BUSCO groups have complete gene representation (single-copy or duplicated), while 4.05% are only partially recovered, and 3.06% are missing. The 30 most expressed genes in O. chelifer venom gland transcriptome included important transcripts involved in venom function such as U-poneritoxin (01)-Om1a-like (pilosulin), chitinase 2, venom allergen 3, chymotrypsin 1 and 2 and glutathione S-transferase. Analysis of the molecular function revealed that the largest number of transcripts were related to catalytic activity, including phospholipases. These data emphasize the potential of O. chelifer venom for prospection of molecules with biotechnological application.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)Universidade Federal de UberlândiaCoordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Laboratory of Biochemistry and Animal Toxins Institute of Biotechnology Federal University of Uberlândia – UFU, MGDepartment of General and Applied Biology Institute of Biosciences São Paulo State University (UNESP), SPLaboratory of Molecular Biology Department of Genetics and Evolution Federal University of São Carlos, Rodovia Washington Luis, Km 235, SPDepartment of General and Applied Biology Institute of Biosciences São Paulo State University (UNESP), SPCAPES: 001CNPq: 315618/2021–3Universidade Federal de Uberlândia (UFU)Universidade Estadual Paulista (UNESP)Universidade Federal de São Carlos (UFSCar)Guimarães, Denise OliveiraFerro, Milene [UNESP]Santos, Thamires SilvaCosta, Tassia RafaelaYoneyama, Kelly Aparecida GeraldoRodrigues, Veridiana de MeloHenrique-Silva, FlávioRodrigues, Renata Santos2023-07-29T12:44:45Z2023-07-29T12:44:45Z2023-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.toxicon.2022.107006Toxicon, v. 223.1879-31500041-0101http://hdl.handle.net/11449/24657810.1016/j.toxicon.2022.1070062-s2.0-85145329800Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengToxiconinfo:eu-repo/semantics/openAccess2023-07-29T12:44:45Zoai:repositorio.unesp.br:11449/246578Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:12:28.093253Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer |
title |
Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer |
spellingShingle |
Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer Guimarães, Denise Oliveira Ant venom Anti-parasite Odontomachus chelifer Phospholipases Transcriptomic analysis |
title_short |
Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer |
title_full |
Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer |
title_fullStr |
Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer |
title_full_unstemmed |
Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer |
title_sort |
Transcriptomic and biochemical analysis from the venom gland of the neotropical ant Odontomachus chelifer |
author |
Guimarães, Denise Oliveira |
author_facet |
Guimarães, Denise Oliveira Ferro, Milene [UNESP] Santos, Thamires Silva Costa, Tassia Rafaela Yoneyama, Kelly Aparecida Geraldo Rodrigues, Veridiana de Melo Henrique-Silva, Flávio Rodrigues, Renata Santos |
author_role |
author |
author2 |
Ferro, Milene [UNESP] Santos, Thamires Silva Costa, Tassia Rafaela Yoneyama, Kelly Aparecida Geraldo Rodrigues, Veridiana de Melo Henrique-Silva, Flávio Rodrigues, Renata Santos |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de Uberlândia (UFU) Universidade Estadual Paulista (UNESP) Universidade Federal de São Carlos (UFSCar) |
dc.contributor.author.fl_str_mv |
Guimarães, Denise Oliveira Ferro, Milene [UNESP] Santos, Thamires Silva Costa, Tassia Rafaela Yoneyama, Kelly Aparecida Geraldo Rodrigues, Veridiana de Melo Henrique-Silva, Flávio Rodrigues, Renata Santos |
dc.subject.por.fl_str_mv |
Ant venom Anti-parasite Odontomachus chelifer Phospholipases Transcriptomic analysis |
topic |
Ant venom Anti-parasite Odontomachus chelifer Phospholipases Transcriptomic analysis |
description |
The genus Odontomachus is widely distributed in neotropical areas throughout Central and South America. It is a stinging ant that subdues its prey (insects) by injecting them a cocktail of toxic molecules (venom). Ant venoms are generally composed of formic acid, alkaloids, hydrocarbons, amines, peptides, and proteins. Odontomachus chelifer is an ant that inhabits neotropical regions from Mexico to Argentina. Unlike the venom of other animals such as scorpions, spiders and snakes, this ant venom has seldom been analyzed comprehensively, and their compositions are not yet completely known. In the present study, we performed a partial investigation of enzymatic and functional activities of O. chelifer ant venom, and we provide a global insight on the transcripts expressed in the venom gland to better understand their properties. The crude venom showed phospholipase A2 and antiparasitic activities. RNA sequencing (Illumina platform) of the venom gland of O. chelifer generated 61, 422, 898 reads and de novo assembly Trinity generated 50,220 contigs. BUSCO analysis against Arthropoda_db10 showed that 92.89% of the BUSCO groups have complete gene representation (single-copy or duplicated), while 4.05% are only partially recovered, and 3.06% are missing. The 30 most expressed genes in O. chelifer venom gland transcriptome included important transcripts involved in venom function such as U-poneritoxin (01)-Om1a-like (pilosulin), chitinase 2, venom allergen 3, chymotrypsin 1 and 2 and glutathione S-transferase. Analysis of the molecular function revealed that the largest number of transcripts were related to catalytic activity, including phospholipases. These data emphasize the potential of O. chelifer venom for prospection of molecules with biotechnological application. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-07-29T12:44:45Z 2023-07-29T12:44:45Z 2023-02-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.toxicon.2022.107006 Toxicon, v. 223. 1879-3150 0041-0101 http://hdl.handle.net/11449/246578 10.1016/j.toxicon.2022.107006 2-s2.0-85145329800 |
url |
http://dx.doi.org/10.1016/j.toxicon.2022.107006 http://hdl.handle.net/11449/246578 |
identifier_str_mv |
Toxicon, v. 223. 1879-3150 0041-0101 10.1016/j.toxicon.2022.107006 2-s2.0-85145329800 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Toxicon |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808129405090791424 |