PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.21577/0100-4042.20230030 http://hdl.handle.net/11449/245302 |
Resumo: | PRINCIPAL COMPONENT ANALYSIS (PCA) FOR CHEMICAL DATA EVALUATION AND HEAT MAPS PREPARATION: A TUTORIAL. This tutorial shows a step-by-step guide on handling big datasets using principal component analysis (PCA). A dataset of chemical elements' concentration, emission spectrum, and energy-dispersive X-ray fluorescence (EDXRF) of e-waste were used as examples. Five routines were proposed to apply data processing and PCA calculation focusing data from laser-induced breakdown spectroscopy (LIBS), EDXRF, and heat maps preparation. These routines can be used in various softwares such as MatLab, Octave, R, and Python. PCA was applied in three examples; the first was for concentrations, and the other two were for spectra. An example of heat maps assembling a hyperspectral image of a printed circuit was also described. In addition, a playlist was created on YouTube using the available examples. Therefore, with this tutorial, it may be possible to learn how to deal with a large volume of data by applying PCA. The authors hope to contribute to those researching in the area. |
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PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIALexploratory analysisdata miningdata visualizationdirect solid sample analysislaserX-ray fluorescencePRINCIPAL COMPONENT ANALYSIS (PCA) FOR CHEMICAL DATA EVALUATION AND HEAT MAPS PREPARATION: A TUTORIAL. This tutorial shows a step-by-step guide on handling big datasets using principal component analysis (PCA). A dataset of chemical elements' concentration, emission spectrum, and energy-dispersive X-ray fluorescence (EDXRF) of e-waste were used as examples. Five routines were proposed to apply data processing and PCA calculation focusing data from laser-induced breakdown spectroscopy (LIBS), EDXRF, and heat maps preparation. These routines can be used in various softwares such as MatLab, Octave, R, and Python. PCA was applied in three examples; the first was for concentrations, and the other two were for spectra. An example of heat maps assembling a hyperspectral image of a printed circuit was also described. In addition, a playlist was created on YouTube using the available examples. Therefore, with this tutorial, it may be possible to learn how to deal with a large volume of data by applying PCA. The authors hope to contribute to those researching in the area.Univ Fed Sao Carlos, Dept Quim, BR-13565905 Sao Carlos, SP, BrazilUniv Estadual Paulista, Inst Quim, BR-14800060 Araraquara, SP, BrazilUniv Estadual Paulista, Inst Quim, BR-14800060 Araraquara, SP, BrazilSoc Brasileira QuimicaUniversidade Federal de São Carlos (UFSCar)Universidade Estadual Paulista (UNESP)Ferreira, Dennis da SilvaRodrigues, Leticia da Silva [UNESP]Pereira, Fabiola Manhas Verbi [UNESP]Pereira-Filho, Edenir Rodrigues2023-07-29T11:50:59Z2023-07-29T11:50:59Z2023-03-08info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article8http://dx.doi.org/10.21577/0100-4042.20230030Quimica Nova. Sao Paulo: Soc Brasileira Quimica, 8 p., 2023.0100-4042http://hdl.handle.net/11449/24530210.21577/0100-4042.20230030WOS:000991897600001Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengQuimica Novainfo:eu-repo/semantics/openAccess2023-07-29T11:50:59Zoai:repositorio.unesp.br:11449/245302Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T17:17:39.676208Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL |
title |
PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL |
spellingShingle |
PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL Ferreira, Dennis da Silva exploratory analysis data mining data visualization direct solid sample analysis laser X-ray fluorescence |
title_short |
PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL |
title_full |
PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL |
title_fullStr |
PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL |
title_full_unstemmed |
PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL |
title_sort |
PRINCIPAL COMPONENT ANALYSIS (PCA) PARA a AVALIAcAO DE DADOS QUiMICOS E GERAcAO DE HEAT MAPS: UM TUTORIAL |
author |
Ferreira, Dennis da Silva |
author_facet |
Ferreira, Dennis da Silva Rodrigues, Leticia da Silva [UNESP] Pereira, Fabiola Manhas Verbi [UNESP] Pereira-Filho, Edenir Rodrigues |
author_role |
author |
author2 |
Rodrigues, Leticia da Silva [UNESP] Pereira, Fabiola Manhas Verbi [UNESP] Pereira-Filho, Edenir Rodrigues |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de São Carlos (UFSCar) Universidade Estadual Paulista (UNESP) |
dc.contributor.author.fl_str_mv |
Ferreira, Dennis da Silva Rodrigues, Leticia da Silva [UNESP] Pereira, Fabiola Manhas Verbi [UNESP] Pereira-Filho, Edenir Rodrigues |
dc.subject.por.fl_str_mv |
exploratory analysis data mining data visualization direct solid sample analysis laser X-ray fluorescence |
topic |
exploratory analysis data mining data visualization direct solid sample analysis laser X-ray fluorescence |
description |
PRINCIPAL COMPONENT ANALYSIS (PCA) FOR CHEMICAL DATA EVALUATION AND HEAT MAPS PREPARATION: A TUTORIAL. This tutorial shows a step-by-step guide on handling big datasets using principal component analysis (PCA). A dataset of chemical elements' concentration, emission spectrum, and energy-dispersive X-ray fluorescence (EDXRF) of e-waste were used as examples. Five routines were proposed to apply data processing and PCA calculation focusing data from laser-induced breakdown spectroscopy (LIBS), EDXRF, and heat maps preparation. These routines can be used in various softwares such as MatLab, Octave, R, and Python. PCA was applied in three examples; the first was for concentrations, and the other two were for spectra. An example of heat maps assembling a hyperspectral image of a printed circuit was also described. In addition, a playlist was created on YouTube using the available examples. Therefore, with this tutorial, it may be possible to learn how to deal with a large volume of data by applying PCA. The authors hope to contribute to those researching in the area. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-07-29T11:50:59Z 2023-07-29T11:50:59Z 2023-03-08 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.21577/0100-4042.20230030 Quimica Nova. Sao Paulo: Soc Brasileira Quimica, 8 p., 2023. 0100-4042 http://hdl.handle.net/11449/245302 10.21577/0100-4042.20230030 WOS:000991897600001 |
url |
http://dx.doi.org/10.21577/0100-4042.20230030 http://hdl.handle.net/11449/245302 |
identifier_str_mv |
Quimica Nova. Sao Paulo: Soc Brasileira Quimica, 8 p., 2023. 0100-4042 10.21577/0100-4042.20230030 WOS:000991897600001 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Quimica Nova |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
8 |
dc.publisher.none.fl_str_mv |
Soc Brasileira Quimica |
publisher.none.fl_str_mv |
Soc Brasileira Quimica |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128786008375296 |