Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1101/226159 http://hdl.handle.net/11449/221282 |
Resumo: | Despite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions. |
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Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stabilityBrachycephalusCoalescentMelanophryniscusTarget enrichmentUltraconserved elementsDespite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Ministério da Ciência e TecnologiaFundação Grupo Boticário de Proteção à NaturezaDepartamento de Zoologia Universidade Federal do ParanáMater Natura – Instituto de Estudos AmbientaisDepartment of Biological Sciences and Museum of Natural Science Louisiana State UniversityEscola de Ciências da Vida Pontifícia Universidade Católica do ParanáInstituto de Biociências Universidade Estadual PaulistaMoore Laboratory of Zoology Occidental CollegeInstituto de Biociências Universidade Estadual PaulistaMinistério da Ciência e Tecnologia: 301636/2016-8Fundação Grupo Boticário de Proteção à Natureza: A0010_2014Universidade Federal do Paraná (UFPR)Mater Natura – Instituto de Estudos AmbientaisLouisiana State UniversityPontifícia Universidade Católica do ParanáUniversidade Estadual Paulista (UNESP)Occidental CollegePie, Marcio R.Faircloth, Brant C.Ribeiro, Luiz F.Bornschein, Marcos R. [UNESP]McCormack, John E.2022-04-28T19:27:07Z2022-04-28T19:27:07Z2018-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article72-82http://dx.doi.org/10.1101/226159Biological Journal of the Linnean Society, v. 125, n. 1, p. 72-82, 2018.1095-83120024-4066http://hdl.handle.net/11449/22128210.1101/2261592-s2.0-85064177710Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBiological Journal of the Linnean Societyinfo:eu-repo/semantics/openAccess2022-04-28T19:27:07Zoai:repositorio.unesp.br:11449/221282Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:52:13.689064Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
spellingShingle |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability Pie, Marcio R. Brachycephalus Coalescent Melanophryniscus Target enrichment Ultraconserved elements |
title_short |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title_full |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title_fullStr |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title_full_unstemmed |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title_sort |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
author |
Pie, Marcio R. |
author_facet |
Pie, Marcio R. Faircloth, Brant C. Ribeiro, Luiz F. Bornschein, Marcos R. [UNESP] McCormack, John E. |
author_role |
author |
author2 |
Faircloth, Brant C. Ribeiro, Luiz F. Bornschein, Marcos R. [UNESP] McCormack, John E. |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal do Paraná (UFPR) Mater Natura – Instituto de Estudos Ambientais Louisiana State University Pontifícia Universidade Católica do Paraná Universidade Estadual Paulista (UNESP) Occidental College |
dc.contributor.author.fl_str_mv |
Pie, Marcio R. Faircloth, Brant C. Ribeiro, Luiz F. Bornschein, Marcos R. [UNESP] McCormack, John E. |
dc.subject.por.fl_str_mv |
Brachycephalus Coalescent Melanophryniscus Target enrichment Ultraconserved elements |
topic |
Brachycephalus Coalescent Melanophryniscus Target enrichment Ultraconserved elements |
description |
Despite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-01-01 2022-04-28T19:27:07Z 2022-04-28T19:27:07Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1101/226159 Biological Journal of the Linnean Society, v. 125, n. 1, p. 72-82, 2018. 1095-8312 0024-4066 http://hdl.handle.net/11449/221282 10.1101/226159 2-s2.0-85064177710 |
url |
http://dx.doi.org/10.1101/226159 http://hdl.handle.net/11449/221282 |
identifier_str_mv |
Biological Journal of the Linnean Society, v. 125, n. 1, p. 72-82, 2018. 1095-8312 0024-4066 10.1101/226159 2-s2.0-85064177710 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Biological Journal of the Linnean Society |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
72-82 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129132256559104 |