Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability

Detalhes bibliográficos
Autor(a) principal: Pie, Marcio R.
Data de Publicação: 2018
Outros Autores: Faircloth, Brant C., Ribeiro, Luiz F., Bornschein, Marcos R. [UNESP], McCormack, John E.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1093/biolinnean/bly093
http://hdl.handle.net/11449/160537
Resumo: Despite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions.
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spelling Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stabilityBrachycephaluscoalescentMelanophryniscustarget enrichmentultraconserved elementsDespite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions.Fundacao Grupo Boticario de Protecao a NaturezaConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Fed Parana, Dept Zool, Curitiba, Parana, BrazilMater Nat Inst Estudos Ambientais, Curitiba, Parana, BrazilLouisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USALouisiana State Univ, Museum Nat Sci, Baton Rouge, LA 70803 USAPontificia Univ Catolica Parana, Escola Ciencias Vida, Curitiba, Parana, BrazilUniv Estadual Paulista, Inst Biociencias, Sao Paulo, BrazilOccidental Coll, Moore Lab Zool, Los Angeles, CA 90041 USAUniv Estadual Paulista, Inst Biociencias, Sao Paulo, BrazilFundacao Grupo Boticario de Protecao a Natureza: A0010_2014CNPq: 301636/2016-8Oxford Univ PressUniv Fed ParanaMater Nat Inst Estudos AmbientaisLouisiana State UnivPontificia Univ Catolica ParanaUniversidade Estadual Paulista (Unesp)Occidental CollPie, Marcio R.Faircloth, Brant C.Ribeiro, Luiz F.Bornschein, Marcos R. [UNESP]McCormack, John E.2018-11-26T16:04:53Z2018-11-26T16:04:53Z2018-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article72-82http://dx.doi.org/10.1093/biolinnean/bly093Biological Journal Of The Linnean Society. Oxford: Oxford Univ Press, v. 125, n. 1, p. 72-82, 2018.0024-4066http://hdl.handle.net/11449/16053710.1093/biolinnean/bly093WOS:000442937000007Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBiological Journal Of The Linnean Society1,175info:eu-repo/semantics/openAccess2021-10-23T11:33:42Zoai:repositorio.unesp.br:11449/160537Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:43:35.503296Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
title Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
spellingShingle Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
Pie, Marcio R.
Brachycephalus
coalescent
Melanophryniscus
target enrichment
ultraconserved elements
title_short Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
title_full Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
title_fullStr Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
title_full_unstemmed Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
title_sort Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
author Pie, Marcio R.
author_facet Pie, Marcio R.
Faircloth, Brant C.
Ribeiro, Luiz F.
Bornschein, Marcos R. [UNESP]
McCormack, John E.
author_role author
author2 Faircloth, Brant C.
Ribeiro, Luiz F.
Bornschein, Marcos R. [UNESP]
McCormack, John E.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Univ Fed Parana
Mater Nat Inst Estudos Ambientais
Louisiana State Univ
Pontificia Univ Catolica Parana
Universidade Estadual Paulista (Unesp)
Occidental Coll
dc.contributor.author.fl_str_mv Pie, Marcio R.
Faircloth, Brant C.
Ribeiro, Luiz F.
Bornschein, Marcos R. [UNESP]
McCormack, John E.
dc.subject.por.fl_str_mv Brachycephalus
coalescent
Melanophryniscus
target enrichment
ultraconserved elements
topic Brachycephalus
coalescent
Melanophryniscus
target enrichment
ultraconserved elements
description Despite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions.
publishDate 2018
dc.date.none.fl_str_mv 2018-11-26T16:04:53Z
2018-11-26T16:04:53Z
2018-09-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1093/biolinnean/bly093
Biological Journal Of The Linnean Society. Oxford: Oxford Univ Press, v. 125, n. 1, p. 72-82, 2018.
0024-4066
http://hdl.handle.net/11449/160537
10.1093/biolinnean/bly093
WOS:000442937000007
url http://dx.doi.org/10.1093/biolinnean/bly093
http://hdl.handle.net/11449/160537
identifier_str_mv Biological Journal Of The Linnean Society. Oxford: Oxford Univ Press, v. 125, n. 1, p. 72-82, 2018.
0024-4066
10.1093/biolinnean/bly093
WOS:000442937000007
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Biological Journal Of The Linnean Society
1,175
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 72-82
dc.publisher.none.fl_str_mv Oxford Univ Press
publisher.none.fl_str_mv Oxford Univ Press
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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