Molecular identification of the fish fauna from the pantanal flood plain area in Brazil

Detalhes bibliográficos
Autor(a) principal: Shimabukuro-Dias, Cristiane Kioko [UNESP]
Data de Publicação: 2017
Outros Autores: Costa Silva, Guilherme Jose da [UNESP], Ashikaga, Fernando Yuldi [UNESP], Foresti, Fausto [UNESP], Oliveira, Claudio [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3109/24701394.2016.1149826
http://hdl.handle.net/11449/162979
Resumo: The Pantanal is under the influence of the Paraguay River flood regime is considered to be one of the largest wetlands of the world, and has rich biodiversity, including fishes. Until now, the identification of fish species in this biome has only considered the morphological characteristics of individuals, and the present work aimed to identify the fish species of the Pantanal region through the DNA barcode methodology for investigating the biodiversity in this region. The genetic analysis of 638 samples via the GMYC approach identified 137 operational taxonomic units (OTUs) belonging to 127 species that have previously been described according to their morphological characteristics. Data suggest that 10 cases of morphospecies (Eigenmannia trileneata, E. virescens, Pimelodella gracilis, Brachyhypopomus pinnicaudatus, Brachyhypopomus sp., Ancistrus sp., Hyphessobrycon eques, Jupiaba acanthogaster, and Serrapinnus calliurus) represent complexes of cryptic species, and the number of species described in the Pantanal region has thus potentially been underestimated.
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spelling Molecular identification of the fish fauna from the pantanal flood plain area in BrazilCryptic speciescytochrome oxidaseDNA sequencingmolecular identificationsympatricThe Pantanal is under the influence of the Paraguay River flood regime is considered to be one of the largest wetlands of the world, and has rich biodiversity, including fishes. Until now, the identification of fish species in this biome has only considered the morphological characteristics of individuals, and the present work aimed to identify the fish species of the Pantanal region through the DNA barcode methodology for investigating the biodiversity in this region. The genetic analysis of 638 samples via the GMYC approach identified 137 operational taxonomic units (OTUs) belonging to 127 species that have previously been described according to their morphological characteristics. Data suggest that 10 cases of morphospecies (Eigenmannia trileneata, E. virescens, Pimelodella gracilis, Brachyhypopomus pinnicaudatus, Brachyhypopomus sp., Ancistrus sp., Hyphessobrycon eques, Jupiaba acanthogaster, and Serrapinnus calliurus) represent complexes of cryptic species, and the number of species described in the Pantanal region has thus potentially been underestimated.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Brazilian agency CONICET (Consejo Nacional de Investigaciones Cientificas y Tecnicas)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Estadual Paulista, Dept Morfol, Lab Biol & Genet Peixes, Botucatu, SP, BrazilUniv Estadual Paulista, Dept Morfol, Lab Biol & Genet Peixes, Botucatu, SP, BrazilTaylor & Francis LtdUniversidade Estadual Paulista (Unesp)Shimabukuro-Dias, Cristiane Kioko [UNESP]Costa Silva, Guilherme Jose da [UNESP]Ashikaga, Fernando Yuldi [UNESP]Foresti, Fausto [UNESP]Oliveira, Claudio [UNESP]2018-11-26T17:35:09Z2018-11-26T17:35:09Z2017-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article588-592application/pdfhttp://dx.doi.org/10.3109/24701394.2016.1149826Mitochondrial Dna Part A. Abingdon: Taylor & Francis Ltd, v. 28, n. 4-5, p. 588-592, 2017.2470-1394http://hdl.handle.net/11449/16297910.3109/24701394.2016.1149826WOS:000405252100018WOS000405252100018.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMitochondrial Dna Part A0,150info:eu-repo/semantics/openAccess2023-10-08T06:02:13Zoai:repositorio.unesp.br:11449/162979Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:18:12.436717Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Molecular identification of the fish fauna from the pantanal flood plain area in Brazil
title Molecular identification of the fish fauna from the pantanal flood plain area in Brazil
spellingShingle Molecular identification of the fish fauna from the pantanal flood plain area in Brazil
Shimabukuro-Dias, Cristiane Kioko [UNESP]
Cryptic species
cytochrome oxidase
DNA sequencing
molecular identification
sympatric
title_short Molecular identification of the fish fauna from the pantanal flood plain area in Brazil
title_full Molecular identification of the fish fauna from the pantanal flood plain area in Brazil
title_fullStr Molecular identification of the fish fauna from the pantanal flood plain area in Brazil
title_full_unstemmed Molecular identification of the fish fauna from the pantanal flood plain area in Brazil
title_sort Molecular identification of the fish fauna from the pantanal flood plain area in Brazil
author Shimabukuro-Dias, Cristiane Kioko [UNESP]
author_facet Shimabukuro-Dias, Cristiane Kioko [UNESP]
Costa Silva, Guilherme Jose da [UNESP]
Ashikaga, Fernando Yuldi [UNESP]
Foresti, Fausto [UNESP]
Oliveira, Claudio [UNESP]
author_role author
author2 Costa Silva, Guilherme Jose da [UNESP]
Ashikaga, Fernando Yuldi [UNESP]
Foresti, Fausto [UNESP]
Oliveira, Claudio [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Shimabukuro-Dias, Cristiane Kioko [UNESP]
Costa Silva, Guilherme Jose da [UNESP]
Ashikaga, Fernando Yuldi [UNESP]
Foresti, Fausto [UNESP]
Oliveira, Claudio [UNESP]
dc.subject.por.fl_str_mv Cryptic species
cytochrome oxidase
DNA sequencing
molecular identification
sympatric
topic Cryptic species
cytochrome oxidase
DNA sequencing
molecular identification
sympatric
description The Pantanal is under the influence of the Paraguay River flood regime is considered to be one of the largest wetlands of the world, and has rich biodiversity, including fishes. Until now, the identification of fish species in this biome has only considered the morphological characteristics of individuals, and the present work aimed to identify the fish species of the Pantanal region through the DNA barcode methodology for investigating the biodiversity in this region. The genetic analysis of 638 samples via the GMYC approach identified 137 operational taxonomic units (OTUs) belonging to 127 species that have previously been described according to their morphological characteristics. Data suggest that 10 cases of morphospecies (Eigenmannia trileneata, E. virescens, Pimelodella gracilis, Brachyhypopomus pinnicaudatus, Brachyhypopomus sp., Ancistrus sp., Hyphessobrycon eques, Jupiaba acanthogaster, and Serrapinnus calliurus) represent complexes of cryptic species, and the number of species described in the Pantanal region has thus potentially been underestimated.
publishDate 2017
dc.date.none.fl_str_mv 2017-09-01
2018-11-26T17:35:09Z
2018-11-26T17:35:09Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3109/24701394.2016.1149826
Mitochondrial Dna Part A. Abingdon: Taylor & Francis Ltd, v. 28, n. 4-5, p. 588-592, 2017.
2470-1394
http://hdl.handle.net/11449/162979
10.3109/24701394.2016.1149826
WOS:000405252100018
WOS000405252100018.pdf
url http://dx.doi.org/10.3109/24701394.2016.1149826
http://hdl.handle.net/11449/162979
identifier_str_mv Mitochondrial Dna Part A. Abingdon: Taylor & Francis Ltd, v. 28, n. 4-5, p. 588-592, 2017.
2470-1394
10.3109/24701394.2016.1149826
WOS:000405252100018
WOS000405252100018.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Mitochondrial Dna Part A
0,150
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 588-592
application/pdf
dc.publisher.none.fl_str_mv Taylor & Francis Ltd
publisher.none.fl_str_mv Taylor & Francis Ltd
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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