Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.3390/ijms21186868 http://hdl.handle.net/11449/206516 |
Resumo: | In many cell types, epigenetic changes are partially regulated by the availability of metabolites involved in the activity of chromatin-modifying enzymes. Even so, the association between metabolism and the typical epigenetic reprogramming that occurs during preimplantation embryo development remains poorly understood. In this work, we explore the link between energy metabolism, more specifically the tricarboxylic acid cycle (TCA), and epigenetic regulation in bovine preimplantation embryos. Using a morphokinetics model of embryonic development (fast-and slow-developing embryos), we show that DNA methylation (5mC) and hydroxymethylation (5hmC) are dynamically regulated and altered by the speed of the first cleavages. More specifically, slow-developing embryos fail to perform the typical reprogramming that is necessary to ensure the generation of blastocysts with higher ability to establish specific cell lineages. Transcriptome analysis revealed that such differences were mainly associated with enzymes involved in the TCA cycle rather than specific writers/erasers of DNA methylation marks. This relationship was later confirmed by disturbing the embryonic metabolism through changes in α-ketoglutarate or succinate availability in culture media. This was sufficient to interfere with the DNA methylation dynamics despite the fact that blastocyst rates and total cell number were not quite affected. These results provide the first evidence of a relationship between epigenetic reprogramming and energy metabolism in bovine embryos. Likewise, levels of metabolites in culture media may be crucial for precise epigenetic reprogramming, with possible further consequences in the molecular control and differentiation of cells. |
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Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryosBovineDNA methylationEmbryoEpigeneticMetabolismIn many cell types, epigenetic changes are partially regulated by the availability of metabolites involved in the activity of chromatin-modifying enzymes. Even so, the association between metabolism and the typical epigenetic reprogramming that occurs during preimplantation embryo development remains poorly understood. In this work, we explore the link between energy metabolism, more specifically the tricarboxylic acid cycle (TCA), and epigenetic regulation in bovine preimplantation embryos. Using a morphokinetics model of embryonic development (fast-and slow-developing embryos), we show that DNA methylation (5mC) and hydroxymethylation (5hmC) are dynamically regulated and altered by the speed of the first cleavages. More specifically, slow-developing embryos fail to perform the typical reprogramming that is necessary to ensure the generation of blastocysts with higher ability to establish specific cell lineages. Transcriptome analysis revealed that such differences were mainly associated with enzymes involved in the TCA cycle rather than specific writers/erasers of DNA methylation marks. This relationship was later confirmed by disturbing the embryonic metabolism through changes in α-ketoglutarate or succinate availability in culture media. This was sufficient to interfere with the DNA methylation dynamics despite the fact that blastocyst rates and total cell number were not quite affected. These results provide the first evidence of a relationship between epigenetic reprogramming and energy metabolism in bovine embryos. Likewise, levels of metabolites in culture media may be crucial for precise epigenetic reprogramming, with possible further consequences in the molecular control and differentiation of cells.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Laboratory of Embryonic Metabolism and Epigenetics Center of Natural and Human Sciences Federal University of ABCInstitute of Biomedical Sciences University of Sao PauloCentre de Recherche en Reproduction Développement et Santé Intergénérationnelle (CRDSI) Département des Sciences Animales Faculté des Sciences de l’Agriculture et de l’Alimentation Université LavalLaboratory of Phytomedicines Pharmacology and Biotechnology Department of Pharmacology Institute of Biosciences São Paulo State University (Unesp), Campus of BotucatuDepartment of Biological Sciences School of Sciences and Languages São Paulo State University (Unesp), Campus of AssisBioinformatics and Health Informatics Group Center for Engineering Modeling and Applied Social Sciences Universidade Federal do ABCCenter for Mathematics Computation and Cognition Universidade Federal do ABCDepartment of Animal Science University of California DavisLaboratory of Phytomedicines Pharmacology and Biotechnology Department of Pharmacology Institute of Biosciences São Paulo State University (Unesp), Campus of BotucatuDepartment of Biological Sciences School of Sciences and Languages São Paulo State University (Unesp), Campus of AssisFAPESP: 2012/50533-2FAPESP: 2015/03381-0FAPESP: 2017/18384-0FAPESP: 2018/11668-6Federal University of ABCUniversidade de São Paulo (USP)Université LavalUniversidade Estadual Paulista (Unesp)Universidade Federal do ABC (UFABC)University of California DavisIspada, Jessicada Fonseca Junior, Aldcejam Martinsde Lima, Camila BrunaDos Santos, Erika CristinaFontes, Patricia Kubo [UNESP]Nogueira, Marcelo Fábio Gouveia [UNESP]da Silva, Vinicius LourençoAlmeida, Fernanda NascimentoLeite, Saul de CastroChitwood, James LeeRoss, Pablo JuanMilazzotto, Marcella Pecora2021-06-25T10:33:34Z2021-06-25T10:33:34Z2020-09-02info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-16http://dx.doi.org/10.3390/ijms21186868International Journal of Molecular Sciences, v. 21, n. 18, p. 1-16, 2020.1422-00671661-6596http://hdl.handle.net/11449/20651610.3390/ijms211868682-s2.0-85091078505Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengInternational Journal of Molecular Sciencesinfo:eu-repo/semantics/openAccess2024-06-13T17:37:59Zoai:repositorio.unesp.br:11449/206516Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T13:58:20.512638Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos |
title |
Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos |
spellingShingle |
Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos Ispada, Jessica Bovine DNA methylation Embryo Epigenetic Metabolism |
title_short |
Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos |
title_full |
Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos |
title_fullStr |
Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos |
title_full_unstemmed |
Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos |
title_sort |
Tricarboxylic acid cycle metabolites as mediators of dna methylation reprogramming in bovine preimplantation embryos |
author |
Ispada, Jessica |
author_facet |
Ispada, Jessica da Fonseca Junior, Aldcejam Martins de Lima, Camila Bruna Dos Santos, Erika Cristina Fontes, Patricia Kubo [UNESP] Nogueira, Marcelo Fábio Gouveia [UNESP] da Silva, Vinicius Lourenço Almeida, Fernanda Nascimento Leite, Saul de Castro Chitwood, James Lee Ross, Pablo Juan Milazzotto, Marcella Pecora |
author_role |
author |
author2 |
da Fonseca Junior, Aldcejam Martins de Lima, Camila Bruna Dos Santos, Erika Cristina Fontes, Patricia Kubo [UNESP] Nogueira, Marcelo Fábio Gouveia [UNESP] da Silva, Vinicius Lourenço Almeida, Fernanda Nascimento Leite, Saul de Castro Chitwood, James Lee Ross, Pablo Juan Milazzotto, Marcella Pecora |
author2_role |
author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Federal University of ABC Universidade de São Paulo (USP) Université Laval Universidade Estadual Paulista (Unesp) Universidade Federal do ABC (UFABC) University of California Davis |
dc.contributor.author.fl_str_mv |
Ispada, Jessica da Fonseca Junior, Aldcejam Martins de Lima, Camila Bruna Dos Santos, Erika Cristina Fontes, Patricia Kubo [UNESP] Nogueira, Marcelo Fábio Gouveia [UNESP] da Silva, Vinicius Lourenço Almeida, Fernanda Nascimento Leite, Saul de Castro Chitwood, James Lee Ross, Pablo Juan Milazzotto, Marcella Pecora |
dc.subject.por.fl_str_mv |
Bovine DNA methylation Embryo Epigenetic Metabolism |
topic |
Bovine DNA methylation Embryo Epigenetic Metabolism |
description |
In many cell types, epigenetic changes are partially regulated by the availability of metabolites involved in the activity of chromatin-modifying enzymes. Even so, the association between metabolism and the typical epigenetic reprogramming that occurs during preimplantation embryo development remains poorly understood. In this work, we explore the link between energy metabolism, more specifically the tricarboxylic acid cycle (TCA), and epigenetic regulation in bovine preimplantation embryos. Using a morphokinetics model of embryonic development (fast-and slow-developing embryos), we show that DNA methylation (5mC) and hydroxymethylation (5hmC) are dynamically regulated and altered by the speed of the first cleavages. More specifically, slow-developing embryos fail to perform the typical reprogramming that is necessary to ensure the generation of blastocysts with higher ability to establish specific cell lineages. Transcriptome analysis revealed that such differences were mainly associated with enzymes involved in the TCA cycle rather than specific writers/erasers of DNA methylation marks. This relationship was later confirmed by disturbing the embryonic metabolism through changes in α-ketoglutarate or succinate availability in culture media. This was sufficient to interfere with the DNA methylation dynamics despite the fact that blastocyst rates and total cell number were not quite affected. These results provide the first evidence of a relationship between epigenetic reprogramming and energy metabolism in bovine embryos. Likewise, levels of metabolites in culture media may be crucial for precise epigenetic reprogramming, with possible further consequences in the molecular control and differentiation of cells. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-09-02 2021-06-25T10:33:34Z 2021-06-25T10:33:34Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.3390/ijms21186868 International Journal of Molecular Sciences, v. 21, n. 18, p. 1-16, 2020. 1422-0067 1661-6596 http://hdl.handle.net/11449/206516 10.3390/ijms21186868 2-s2.0-85091078505 |
url |
http://dx.doi.org/10.3390/ijms21186868 http://hdl.handle.net/11449/206516 |
identifier_str_mv |
International Journal of Molecular Sciences, v. 21, n. 18, p. 1-16, 2020. 1422-0067 1661-6596 10.3390/ijms21186868 2-s2.0-85091078505 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
International Journal of Molecular Sciences |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1-16 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128298470866944 |