Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1159/000447959 http://hdl.handle.net/11449/162285 |
Resumo: | Sex chromosome evolution involves the accumulation of repeat sequences such as multigenic families, noncoding repetitive DNA (satellite, nninisatellite, and microsatellite), and mobile elements such as transposons and retrotransposons. Most species of Characidium exhibit heteromorphic ZZ/ZW sex chromosomes; the W is characterized by an intense accumulation of repetitive DNA including dispersed satellite DNA sequences and transposable elements. The aim of this study was to analyze the distribution pattern of 18 different tandem repeats, including (GATA)(n) and (TTAGGG)(n), in the genonnes of C. zebra and C. gomesi, especially in the C. gomesi W chromosome. In the C. gomesi W chromosome, weak signals were seen for (CAA)(10), (CAC)(10) (CAT)(10), (CGG)(10), (GAC)(10), and (CA)(15) probes, (GA)(15) and (TA)(15) hybridized to the autosomes but not to the W chromosome. The (GATA), probe hybridized to the short arms of the W chromosome as well as the (CG)(15) probe, The (GATA)(n) repeat is known to be a protein-binding motif. GATA-binding proteins are necessary for the decondensation of heterochromatic regions that hold coding genes, especially in some heteromorphic sex chromosomes that may keep genes related to oocyte development. The (TAA)(10) repeat is accumulated in the entire W chromosome, and this nnicrosatellite accumulation is probably involved in the sex chronnosonnedifferentiation process and crossover suppression in C. gomesi. These additional data on the W chromosome DNA composition help to explain the evolution of sex chromosomes in Characidium. (C) 2016 S. Karger AG, Basel |
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Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)Chromosome differentiationHeterochronnatinRepetitive DNASex chromosomesSex chromosome evolution involves the accumulation of repeat sequences such as multigenic families, noncoding repetitive DNA (satellite, nninisatellite, and microsatellite), and mobile elements such as transposons and retrotransposons. Most species of Characidium exhibit heteromorphic ZZ/ZW sex chromosomes; the W is characterized by an intense accumulation of repetitive DNA including dispersed satellite DNA sequences and transposable elements. The aim of this study was to analyze the distribution pattern of 18 different tandem repeats, including (GATA)(n) and (TTAGGG)(n), in the genonnes of C. zebra and C. gomesi, especially in the C. gomesi W chromosome. In the C. gomesi W chromosome, weak signals were seen for (CAA)(10), (CAC)(10) (CAT)(10), (CGG)(10), (GAC)(10), and (CA)(15) probes, (GA)(15) and (TA)(15) hybridized to the autosomes but not to the W chromosome. The (GATA), probe hybridized to the short arms of the W chromosome as well as the (CG)(15) probe, The (GATA)(n) repeat is known to be a protein-binding motif. GATA-binding proteins are necessary for the decondensation of heterochromatic regions that hold coding genes, especially in some heteromorphic sex chromosomes that may keep genes related to oocyte development. The (TAA)(10) repeat is accumulated in the entire W chromosome, and this nnicrosatellite accumulation is probably involved in the sex chronnosonnedifferentiation process and crossover suppression in C. gomesi. These additional data on the W chromosome DNA composition help to explain the evolution of sex chromosomes in Characidium. (C) 2016 S. Karger AG, BaselFundacao Araucaria (Fundacao Araucaria de Apoio ao Desenvolvimento Cientifico e Tecnologico do Estado do Parana)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Fed Sao Carlos, Dept Genet & Evolucao, Sao Carlos, SP, BrazilUniv Estadual Ponta Grossa, Programa Posgrad Biol Evolut, Ave Carlos Cavalcanti 4748, BR-84030900 Ponta Grossa, PR, BrazilUniv Estadual Paulista, Dept Morfol, Botucatu, SP, BrazilUniv Estadual Paulista, Dept Morfol, Botucatu, SP, BrazilKargerUniversidade Federal de São Carlos (UFSCar)Universidade Estadual de Ponta Grossa (UEPG)Universidade Estadual Paulista (Unesp)Pucci, Marcela B.Barbosa, PatriciaNogaroto, VivianeAlnneida, Mara C.Artoni, Roberto F.Scacchetti, Priscila C. [UNESP]Pansonato-Alves, Jose C. [UNESP]Foresti, Fausto [UNESP]Moreira-Filho, OrlandoVicari, Marcelo R.2018-11-26T17:15:28Z2018-11-26T17:15:28Z2016-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article182-190application/pdfhttp://dx.doi.org/10.1159/000447959Cytogenetic And Genome Research. Basel: Karger, v. 149, n. 3, p. 182-190, 2016.1424-8581http://hdl.handle.net/11449/16228510.1159/000447959WOS:000390672100006WOS000390672100006.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCytogenetic And Genome Research0,748info:eu-repo/semantics/openAccess2023-10-19T06:10:50Zoai:repositorio.unesp.br:11449/162285Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:22:52.464047Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae) |
title |
Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae) |
spellingShingle |
Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae) Pucci, Marcela B. Chromosome differentiation Heterochronnatin Repetitive DNA Sex chromosomes |
title_short |
Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae) |
title_full |
Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae) |
title_fullStr |
Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae) |
title_full_unstemmed |
Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae) |
title_sort |
Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae) |
author |
Pucci, Marcela B. |
author_facet |
Pucci, Marcela B. Barbosa, Patricia Nogaroto, Viviane Alnneida, Mara C. Artoni, Roberto F. Scacchetti, Priscila C. [UNESP] Pansonato-Alves, Jose C. [UNESP] Foresti, Fausto [UNESP] Moreira-Filho, Orlando Vicari, Marcelo R. |
author_role |
author |
author2 |
Barbosa, Patricia Nogaroto, Viviane Alnneida, Mara C. Artoni, Roberto F. Scacchetti, Priscila C. [UNESP] Pansonato-Alves, Jose C. [UNESP] Foresti, Fausto [UNESP] Moreira-Filho, Orlando Vicari, Marcelo R. |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de São Carlos (UFSCar) Universidade Estadual de Ponta Grossa (UEPG) Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Pucci, Marcela B. Barbosa, Patricia Nogaroto, Viviane Alnneida, Mara C. Artoni, Roberto F. Scacchetti, Priscila C. [UNESP] Pansonato-Alves, Jose C. [UNESP] Foresti, Fausto [UNESP] Moreira-Filho, Orlando Vicari, Marcelo R. |
dc.subject.por.fl_str_mv |
Chromosome differentiation Heterochronnatin Repetitive DNA Sex chromosomes |
topic |
Chromosome differentiation Heterochronnatin Repetitive DNA Sex chromosomes |
description |
Sex chromosome evolution involves the accumulation of repeat sequences such as multigenic families, noncoding repetitive DNA (satellite, nninisatellite, and microsatellite), and mobile elements such as transposons and retrotransposons. Most species of Characidium exhibit heteromorphic ZZ/ZW sex chromosomes; the W is characterized by an intense accumulation of repetitive DNA including dispersed satellite DNA sequences and transposable elements. The aim of this study was to analyze the distribution pattern of 18 different tandem repeats, including (GATA)(n) and (TTAGGG)(n), in the genonnes of C. zebra and C. gomesi, especially in the C. gomesi W chromosome. In the C. gomesi W chromosome, weak signals were seen for (CAA)(10), (CAC)(10) (CAT)(10), (CGG)(10), (GAC)(10), and (CA)(15) probes, (GA)(15) and (TA)(15) hybridized to the autosomes but not to the W chromosome. The (GATA), probe hybridized to the short arms of the W chromosome as well as the (CG)(15) probe, The (GATA)(n) repeat is known to be a protein-binding motif. GATA-binding proteins are necessary for the decondensation of heterochromatic regions that hold coding genes, especially in some heteromorphic sex chromosomes that may keep genes related to oocyte development. The (TAA)(10) repeat is accumulated in the entire W chromosome, and this nnicrosatellite accumulation is probably involved in the sex chronnosonnedifferentiation process and crossover suppression in C. gomesi. These additional data on the W chromosome DNA composition help to explain the evolution of sex chromosomes in Characidium. (C) 2016 S. Karger AG, Basel |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-01-01 2018-11-26T17:15:28Z 2018-11-26T17:15:28Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1159/000447959 Cytogenetic And Genome Research. Basel: Karger, v. 149, n. 3, p. 182-190, 2016. 1424-8581 http://hdl.handle.net/11449/162285 10.1159/000447959 WOS:000390672100006 WOS000390672100006.pdf |
url |
http://dx.doi.org/10.1159/000447959 http://hdl.handle.net/11449/162285 |
identifier_str_mv |
Cytogenetic And Genome Research. Basel: Karger, v. 149, n. 3, p. 182-190, 2016. 1424-8581 10.1159/000447959 WOS:000390672100006 WOS000390672100006.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Cytogenetic And Genome Research 0,748 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
182-190 application/pdf |
dc.publisher.none.fl_str_mv |
Karger |
publisher.none.fl_str_mv |
Karger |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128506205306880 |