Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)

Detalhes bibliográficos
Autor(a) principal: Pucci, Marcela B.
Data de Publicação: 2016
Outros Autores: Barbosa, Patricia, Nogaroto, Viviane, Alnneida, Mara C., Artoni, Roberto F., Scacchetti, Priscila C. [UNESP], Pansonato-Alves, Jose C. [UNESP], Foresti, Fausto [UNESP], Moreira-Filho, Orlando, Vicari, Marcelo R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1159/000447959
http://hdl.handle.net/11449/162285
Resumo: Sex chromosome evolution involves the accumulation of repeat sequences such as multigenic families, noncoding repetitive DNA (satellite, nninisatellite, and microsatellite), and mobile elements such as transposons and retrotransposons. Most species of Characidium exhibit heteromorphic ZZ/ZW sex chromosomes; the W is characterized by an intense accumulation of repetitive DNA including dispersed satellite DNA sequences and transposable elements. The aim of this study was to analyze the distribution pattern of 18 different tandem repeats, including (GATA)(n) and (TTAGGG)(n), in the genonnes of C. zebra and C. gomesi, especially in the C. gomesi W chromosome. In the C. gomesi W chromosome, weak signals were seen for (CAA)(10), (CAC)(10) (CAT)(10), (CGG)(10), (GAC)(10), and (CA)(15) probes, (GA)(15) and (TA)(15) hybridized to the autosomes but not to the W chromosome. The (GATA), probe hybridized to the short arms of the W chromosome as well as the (CG)(15) probe, The (GATA)(n) repeat is known to be a protein-binding motif. GATA-binding proteins are necessary for the decondensation of heterochromatic regions that hold coding genes, especially in some heteromorphic sex chromosomes that may keep genes related to oocyte development. The (TAA)(10) repeat is accumulated in the entire W chromosome, and this nnicrosatellite accumulation is probably involved in the sex chronnosonnedifferentiation process and crossover suppression in C. gomesi. These additional data on the W chromosome DNA composition help to explain the evolution of sex chromosomes in Characidium. (C) 2016 S. Karger AG, Basel
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spelling Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)Chromosome differentiationHeterochronnatinRepetitive DNASex chromosomesSex chromosome evolution involves the accumulation of repeat sequences such as multigenic families, noncoding repetitive DNA (satellite, nninisatellite, and microsatellite), and mobile elements such as transposons and retrotransposons. Most species of Characidium exhibit heteromorphic ZZ/ZW sex chromosomes; the W is characterized by an intense accumulation of repetitive DNA including dispersed satellite DNA sequences and transposable elements. The aim of this study was to analyze the distribution pattern of 18 different tandem repeats, including (GATA)(n) and (TTAGGG)(n), in the genonnes of C. zebra and C. gomesi, especially in the C. gomesi W chromosome. In the C. gomesi W chromosome, weak signals were seen for (CAA)(10), (CAC)(10) (CAT)(10), (CGG)(10), (GAC)(10), and (CA)(15) probes, (GA)(15) and (TA)(15) hybridized to the autosomes but not to the W chromosome. The (GATA), probe hybridized to the short arms of the W chromosome as well as the (CG)(15) probe, The (GATA)(n) repeat is known to be a protein-binding motif. GATA-binding proteins are necessary for the decondensation of heterochromatic regions that hold coding genes, especially in some heteromorphic sex chromosomes that may keep genes related to oocyte development. The (TAA)(10) repeat is accumulated in the entire W chromosome, and this nnicrosatellite accumulation is probably involved in the sex chronnosonnedifferentiation process and crossover suppression in C. gomesi. These additional data on the W chromosome DNA composition help to explain the evolution of sex chromosomes in Characidium. (C) 2016 S. Karger AG, BaselFundacao Araucaria (Fundacao Araucaria de Apoio ao Desenvolvimento Cientifico e Tecnologico do Estado do Parana)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Fed Sao Carlos, Dept Genet & Evolucao, Sao Carlos, SP, BrazilUniv Estadual Ponta Grossa, Programa Posgrad Biol Evolut, Ave Carlos Cavalcanti 4748, BR-84030900 Ponta Grossa, PR, BrazilUniv Estadual Paulista, Dept Morfol, Botucatu, SP, BrazilUniv Estadual Paulista, Dept Morfol, Botucatu, SP, BrazilKargerUniversidade Federal de São Carlos (UFSCar)Universidade Estadual de Ponta Grossa (UEPG)Universidade Estadual Paulista (Unesp)Pucci, Marcela B.Barbosa, PatriciaNogaroto, VivianeAlnneida, Mara C.Artoni, Roberto F.Scacchetti, Priscila C. [UNESP]Pansonato-Alves, Jose C. [UNESP]Foresti, Fausto [UNESP]Moreira-Filho, OrlandoVicari, Marcelo R.2018-11-26T17:15:28Z2018-11-26T17:15:28Z2016-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article182-190application/pdfhttp://dx.doi.org/10.1159/000447959Cytogenetic And Genome Research. Basel: Karger, v. 149, n. 3, p. 182-190, 2016.1424-8581http://hdl.handle.net/11449/16228510.1159/000447959WOS:000390672100006WOS000390672100006.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCytogenetic And Genome Research0,748info:eu-repo/semantics/openAccess2023-10-19T06:10:50Zoai:repositorio.unesp.br:11449/162285Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:22:52.464047Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
title Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
spellingShingle Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
Pucci, Marcela B.
Chromosome differentiation
Heterochronnatin
Repetitive DNA
Sex chromosomes
title_short Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
title_full Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
title_fullStr Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
title_full_unstemmed Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
title_sort Chromosomal Spreading of Microsatellites and (TTAGGG)(n) Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)
author Pucci, Marcela B.
author_facet Pucci, Marcela B.
Barbosa, Patricia
Nogaroto, Viviane
Alnneida, Mara C.
Artoni, Roberto F.
Scacchetti, Priscila C. [UNESP]
Pansonato-Alves, Jose C. [UNESP]
Foresti, Fausto [UNESP]
Moreira-Filho, Orlando
Vicari, Marcelo R.
author_role author
author2 Barbosa, Patricia
Nogaroto, Viviane
Alnneida, Mara C.
Artoni, Roberto F.
Scacchetti, Priscila C. [UNESP]
Pansonato-Alves, Jose C. [UNESP]
Foresti, Fausto [UNESP]
Moreira-Filho, Orlando
Vicari, Marcelo R.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de São Carlos (UFSCar)
Universidade Estadual de Ponta Grossa (UEPG)
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Pucci, Marcela B.
Barbosa, Patricia
Nogaroto, Viviane
Alnneida, Mara C.
Artoni, Roberto F.
Scacchetti, Priscila C. [UNESP]
Pansonato-Alves, Jose C. [UNESP]
Foresti, Fausto [UNESP]
Moreira-Filho, Orlando
Vicari, Marcelo R.
dc.subject.por.fl_str_mv Chromosome differentiation
Heterochronnatin
Repetitive DNA
Sex chromosomes
topic Chromosome differentiation
Heterochronnatin
Repetitive DNA
Sex chromosomes
description Sex chromosome evolution involves the accumulation of repeat sequences such as multigenic families, noncoding repetitive DNA (satellite, nninisatellite, and microsatellite), and mobile elements such as transposons and retrotransposons. Most species of Characidium exhibit heteromorphic ZZ/ZW sex chromosomes; the W is characterized by an intense accumulation of repetitive DNA including dispersed satellite DNA sequences and transposable elements. The aim of this study was to analyze the distribution pattern of 18 different tandem repeats, including (GATA)(n) and (TTAGGG)(n), in the genonnes of C. zebra and C. gomesi, especially in the C. gomesi W chromosome. In the C. gomesi W chromosome, weak signals were seen for (CAA)(10), (CAC)(10) (CAT)(10), (CGG)(10), (GAC)(10), and (CA)(15) probes, (GA)(15) and (TA)(15) hybridized to the autosomes but not to the W chromosome. The (GATA), probe hybridized to the short arms of the W chromosome as well as the (CG)(15) probe, The (GATA)(n) repeat is known to be a protein-binding motif. GATA-binding proteins are necessary for the decondensation of heterochromatic regions that hold coding genes, especially in some heteromorphic sex chromosomes that may keep genes related to oocyte development. The (TAA)(10) repeat is accumulated in the entire W chromosome, and this nnicrosatellite accumulation is probably involved in the sex chronnosonnedifferentiation process and crossover suppression in C. gomesi. These additional data on the W chromosome DNA composition help to explain the evolution of sex chromosomes in Characidium. (C) 2016 S. Karger AG, Basel
publishDate 2016
dc.date.none.fl_str_mv 2016-01-01
2018-11-26T17:15:28Z
2018-11-26T17:15:28Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1159/000447959
Cytogenetic And Genome Research. Basel: Karger, v. 149, n. 3, p. 182-190, 2016.
1424-8581
http://hdl.handle.net/11449/162285
10.1159/000447959
WOS:000390672100006
WOS000390672100006.pdf
url http://dx.doi.org/10.1159/000447959
http://hdl.handle.net/11449/162285
identifier_str_mv Cytogenetic And Genome Research. Basel: Karger, v. 149, n. 3, p. 182-190, 2016.
1424-8581
10.1159/000447959
WOS:000390672100006
WOS000390672100006.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Cytogenetic And Genome Research
0,748
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 182-190
application/pdf
dc.publisher.none.fl_str_mv Karger
publisher.none.fl_str_mv Karger
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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