Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1007/s00253-020-10806-6 http://hdl.handle.net/11449/199268 |
Resumo: | Abstract: Arabinanases from glycoside hydrolase family GH93 are enzymes with exo-activity that hydrolyze the α-1,5 bonds between arabinose residues present on arabinan. Currently, several initiatives aiming to use byproducts rich in arabinan such as pectin and sugar beet pulp as raw material to produce various compounds of interest are being developed. However, it is necessary to use robust enzymes that have an optimal performance under pH and temperature conditions used in the industrial processes. In this work, the first GH93 from the thermophilic fungus Thermothielavioides terrestris (Abn93T) was heterologously expressed in Aspergillus nidulans, purified and biochemically characterized. The enzyme is a thermophilic glycoprotein (optimum activity at 70 °C) with prolonged stability in acid pHs (4.0 to 6.5). The presence of glycosylation affected slightly the hydrolytic capacity of the enzyme, which was further increased by 34% in the presence of 1 mM CoCl2. Small-angle X-ray scattering results show that Abn93T is a globular-like-shaped protein with a slight bulge at one end. The hydrolytic mechanism of the enzyme was elucidated using capillary zone electrophoresis and molecular docking calculations. Abn93T has an ability to produce (in synergism with arabinofuranosidases) arabinose and arabinobiose from sugar beet arabinan, which can be explored as fermentable sugars and prebiotics. Key points: • Thermophilic exo-arabinanase from family GH93 • Molecular basis of arabinan depolymerization. |
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Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestrisArabinanAspergillus nidulansExo-arabinanaseSugar beet pulpThermothielavioides terrestrisAbstract: Arabinanases from glycoside hydrolase family GH93 are enzymes with exo-activity that hydrolyze the α-1,5 bonds between arabinose residues present on arabinan. Currently, several initiatives aiming to use byproducts rich in arabinan such as pectin and sugar beet pulp as raw material to produce various compounds of interest are being developed. However, it is necessary to use robust enzymes that have an optimal performance under pH and temperature conditions used in the industrial processes. In this work, the first GH93 from the thermophilic fungus Thermothielavioides terrestris (Abn93T) was heterologously expressed in Aspergillus nidulans, purified and biochemically characterized. The enzyme is a thermophilic glycoprotein (optimum activity at 70 °C) with prolonged stability in acid pHs (4.0 to 6.5). The presence of glycosylation affected slightly the hydrolytic capacity of the enzyme, which was further increased by 34% in the presence of 1 mM CoCl2. Small-angle X-ray scattering results show that Abn93T is a globular-like-shaped protein with a slight bulge at one end. The hydrolytic mechanism of the enzyme was elucidated using capillary zone electrophoresis and molecular docking calculations. Abn93T has an ability to produce (in synergism with arabinofuranosidases) arabinose and arabinobiose from sugar beet arabinan, which can be explored as fermentable sugars and prebiotics. Key points: • Thermophilic exo-arabinanase from family GH93 • Molecular basis of arabinan depolymerization.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Department of Biotechnology Lorena School of Engineering University of São PauloDepartamento de Física e Ciências Aplicadas Instituto de Física de São Carlos Universidade de São PauloDepartamento de Bioquímica Instituto de Biologia Universidade Estadual de CampinasPrograma de Processos Tecnológicos e Ambientais Universidade de SorocabaInstituto de Pesquisas Tecnológicas do Estado de São Paulo Diretoria de Operações e Negócios Núcleo de BionanomanufaturaDepartment of Physics – Institute of Biosciences Humanities and Exact Sciences São Paulo State University (UNESP)Department of Physics – Institute of Biosciences Humanities and Exact Sciences São Paulo State University (UNESP)FAPESP: 2014/06923-6FAPESP: 2014/18714-2FAPESP: 2017/00525-0FAPESP: 2019/01165-0CNPq: 2019/06663-8FAPESP: 2019/06663-8FAPESP: 2019/22284-7CNPq: 302627/2018-9CNPq: 443916/2014-4Universidade de São Paulo (USP)Universidade Estadual de Campinas (UNICAMP)Universidade de SorocabaNúcleo de BionanomanufaturaUniversidade Estadual Paulista (Unesp)Velasco, JosmanOliva, BiancaGonçalves, Aline LarissaLima, Awana SilvaFerreira, GisleneFrança, Bruno AlvesMulinari, Evandro JoséGonçalves, Thiago AugustoSquina, Fábio MárcioKadowaki, Marco Antonio SeikiMaiorano, AlfredoPolikarpov, IgorOliveira, Leandro Cristante de [UNESP]Segato, Fernando2020-12-12T01:35:12Z2020-12-12T01:35:12Z2020-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article8309-8326http://dx.doi.org/10.1007/s00253-020-10806-6Applied Microbiology and Biotechnology, v. 104, n. 19, p. 8309-8326, 2020.1432-06140175-7598http://hdl.handle.net/11449/19926810.1007/s00253-020-10806-62-s2.0-85089502160Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengApplied Microbiology and Biotechnologyinfo:eu-repo/semantics/openAccess2021-10-23T06:37:24Zoai:repositorio.unesp.br:11449/199268Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:35:59.621669Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris |
title |
Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris |
spellingShingle |
Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris Velasco, Josman Arabinan Aspergillus nidulans Exo-arabinanase Sugar beet pulp Thermothielavioides terrestris |
title_short |
Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris |
title_full |
Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris |
title_fullStr |
Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris |
title_full_unstemmed |
Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris |
title_sort |
Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris |
author |
Velasco, Josman |
author_facet |
Velasco, Josman Oliva, Bianca Gonçalves, Aline Larissa Lima, Awana Silva Ferreira, Gislene França, Bruno Alves Mulinari, Evandro José Gonçalves, Thiago Augusto Squina, Fábio Márcio Kadowaki, Marco Antonio Seiki Maiorano, Alfredo Polikarpov, Igor Oliveira, Leandro Cristante de [UNESP] Segato, Fernando |
author_role |
author |
author2 |
Oliva, Bianca Gonçalves, Aline Larissa Lima, Awana Silva Ferreira, Gislene França, Bruno Alves Mulinari, Evandro José Gonçalves, Thiago Augusto Squina, Fábio Márcio Kadowaki, Marco Antonio Seiki Maiorano, Alfredo Polikarpov, Igor Oliveira, Leandro Cristante de [UNESP] Segato, Fernando |
author2_role |
author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade de São Paulo (USP) Universidade Estadual de Campinas (UNICAMP) Universidade de Sorocaba Núcleo de Bionanomanufatura Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Velasco, Josman Oliva, Bianca Gonçalves, Aline Larissa Lima, Awana Silva Ferreira, Gislene França, Bruno Alves Mulinari, Evandro José Gonçalves, Thiago Augusto Squina, Fábio Márcio Kadowaki, Marco Antonio Seiki Maiorano, Alfredo Polikarpov, Igor Oliveira, Leandro Cristante de [UNESP] Segato, Fernando |
dc.subject.por.fl_str_mv |
Arabinan Aspergillus nidulans Exo-arabinanase Sugar beet pulp Thermothielavioides terrestris |
topic |
Arabinan Aspergillus nidulans Exo-arabinanase Sugar beet pulp Thermothielavioides terrestris |
description |
Abstract: Arabinanases from glycoside hydrolase family GH93 are enzymes with exo-activity that hydrolyze the α-1,5 bonds between arabinose residues present on arabinan. Currently, several initiatives aiming to use byproducts rich in arabinan such as pectin and sugar beet pulp as raw material to produce various compounds of interest are being developed. However, it is necessary to use robust enzymes that have an optimal performance under pH and temperature conditions used in the industrial processes. In this work, the first GH93 from the thermophilic fungus Thermothielavioides terrestris (Abn93T) was heterologously expressed in Aspergillus nidulans, purified and biochemically characterized. The enzyme is a thermophilic glycoprotein (optimum activity at 70 °C) with prolonged stability in acid pHs (4.0 to 6.5). The presence of glycosylation affected slightly the hydrolytic capacity of the enzyme, which was further increased by 34% in the presence of 1 mM CoCl2. Small-angle X-ray scattering results show that Abn93T is a globular-like-shaped protein with a slight bulge at one end. The hydrolytic mechanism of the enzyme was elucidated using capillary zone electrophoresis and molecular docking calculations. Abn93T has an ability to produce (in synergism with arabinofuranosidases) arabinose and arabinobiose from sugar beet arabinan, which can be explored as fermentable sugars and prebiotics. Key points: • Thermophilic exo-arabinanase from family GH93 • Molecular basis of arabinan depolymerization. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-12T01:35:12Z 2020-12-12T01:35:12Z 2020-10-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s00253-020-10806-6 Applied Microbiology and Biotechnology, v. 104, n. 19, p. 8309-8326, 2020. 1432-0614 0175-7598 http://hdl.handle.net/11449/199268 10.1007/s00253-020-10806-6 2-s2.0-85089502160 |
url |
http://dx.doi.org/10.1007/s00253-020-10806-6 http://hdl.handle.net/11449/199268 |
identifier_str_mv |
Applied Microbiology and Biotechnology, v. 104, n. 19, p. 8309-8326, 2020. 1432-0614 0175-7598 10.1007/s00253-020-10806-6 2-s2.0-85089502160 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Applied Microbiology and Biotechnology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
8309-8326 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129093677350912 |