Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris

Detalhes bibliográficos
Autor(a) principal: Velasco, Josman
Data de Publicação: 2020
Outros Autores: Oliva, Bianca, Gonçalves, Aline Larissa, Lima, Awana Silva, Ferreira, Gislene, França, Bruno Alves, Mulinari, Evandro José, Gonçalves, Thiago Augusto, Squina, Fábio Márcio, Kadowaki, Marco Antonio Seiki, Maiorano, Alfredo, Polikarpov, Igor, Oliveira, Leandro Cristante de [UNESP], Segato, Fernando
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1007/s00253-020-10806-6
http://hdl.handle.net/11449/199268
Resumo: Abstract: Arabinanases from glycoside hydrolase family GH93 are enzymes with exo-activity that hydrolyze the α-1,5 bonds between arabinose residues present on arabinan. Currently, several initiatives aiming to use byproducts rich in arabinan such as pectin and sugar beet pulp as raw material to produce various compounds of interest are being developed. However, it is necessary to use robust enzymes that have an optimal performance under pH and temperature conditions used in the industrial processes. In this work, the first GH93 from the thermophilic fungus Thermothielavioides terrestris (Abn93T) was heterologously expressed in Aspergillus nidulans, purified and biochemically characterized. The enzyme is a thermophilic glycoprotein (optimum activity at 70 °C) with prolonged stability in acid pHs (4.0 to 6.5). The presence of glycosylation affected slightly the hydrolytic capacity of the enzyme, which was further increased by 34% in the presence of 1 mM CoCl2. Small-angle X-ray scattering results show that Abn93T is a globular-like-shaped protein with a slight bulge at one end. The hydrolytic mechanism of the enzyme was elucidated using capillary zone electrophoresis and molecular docking calculations. Abn93T has an ability to produce (in synergism with arabinofuranosidases) arabinose and arabinobiose from sugar beet arabinan, which can be explored as fermentable sugars and prebiotics. Key points: • Thermophilic exo-arabinanase from family GH93 • Molecular basis of arabinan depolymerization.
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spelling Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestrisArabinanAspergillus nidulansExo-arabinanaseSugar beet pulpThermothielavioides terrestrisAbstract: Arabinanases from glycoside hydrolase family GH93 are enzymes with exo-activity that hydrolyze the α-1,5 bonds between arabinose residues present on arabinan. Currently, several initiatives aiming to use byproducts rich in arabinan such as pectin and sugar beet pulp as raw material to produce various compounds of interest are being developed. However, it is necessary to use robust enzymes that have an optimal performance under pH and temperature conditions used in the industrial processes. In this work, the first GH93 from the thermophilic fungus Thermothielavioides terrestris (Abn93T) was heterologously expressed in Aspergillus nidulans, purified and biochemically characterized. The enzyme is a thermophilic glycoprotein (optimum activity at 70 °C) with prolonged stability in acid pHs (4.0 to 6.5). The presence of glycosylation affected slightly the hydrolytic capacity of the enzyme, which was further increased by 34% in the presence of 1 mM CoCl2. Small-angle X-ray scattering results show that Abn93T is a globular-like-shaped protein with a slight bulge at one end. The hydrolytic mechanism of the enzyme was elucidated using capillary zone electrophoresis and molecular docking calculations. Abn93T has an ability to produce (in synergism with arabinofuranosidases) arabinose and arabinobiose from sugar beet arabinan, which can be explored as fermentable sugars and prebiotics. Key points: • Thermophilic exo-arabinanase from family GH93 • Molecular basis of arabinan depolymerization.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Department of Biotechnology Lorena School of Engineering University of São PauloDepartamento de Física e Ciências Aplicadas Instituto de Física de São Carlos Universidade de São PauloDepartamento de Bioquímica Instituto de Biologia Universidade Estadual de CampinasPrograma de Processos Tecnológicos e Ambientais Universidade de SorocabaInstituto de Pesquisas Tecnológicas do Estado de São Paulo Diretoria de Operações e Negócios Núcleo de BionanomanufaturaDepartment of Physics – Institute of Biosciences Humanities and Exact Sciences São Paulo State University (UNESP)Department of Physics – Institute of Biosciences Humanities and Exact Sciences São Paulo State University (UNESP)FAPESP: 2014/06923-6FAPESP: 2014/18714-2FAPESP: 2017/00525-0FAPESP: 2019/01165-0CNPq: 2019/06663-8FAPESP: 2019/06663-8FAPESP: 2019/22284-7CNPq: 302627/2018-9CNPq: 443916/2014-4Universidade de São Paulo (USP)Universidade Estadual de Campinas (UNICAMP)Universidade de SorocabaNúcleo de BionanomanufaturaUniversidade Estadual Paulista (Unesp)Velasco, JosmanOliva, BiancaGonçalves, Aline LarissaLima, Awana SilvaFerreira, GisleneFrança, Bruno AlvesMulinari, Evandro JoséGonçalves, Thiago AugustoSquina, Fábio MárcioKadowaki, Marco Antonio SeikiMaiorano, AlfredoPolikarpov, IgorOliveira, Leandro Cristante de [UNESP]Segato, Fernando2020-12-12T01:35:12Z2020-12-12T01:35:12Z2020-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article8309-8326http://dx.doi.org/10.1007/s00253-020-10806-6Applied Microbiology and Biotechnology, v. 104, n. 19, p. 8309-8326, 2020.1432-06140175-7598http://hdl.handle.net/11449/19926810.1007/s00253-020-10806-62-s2.0-85089502160Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengApplied Microbiology and Biotechnologyinfo:eu-repo/semantics/openAccess2021-10-23T06:37:24Zoai:repositorio.unesp.br:11449/199268Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:35:59.621669Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
title Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
spellingShingle Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
Velasco, Josman
Arabinan
Aspergillus nidulans
Exo-arabinanase
Sugar beet pulp
Thermothielavioides terrestris
title_short Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
title_full Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
title_fullStr Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
title_full_unstemmed Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
title_sort Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris
author Velasco, Josman
author_facet Velasco, Josman
Oliva, Bianca
Gonçalves, Aline Larissa
Lima, Awana Silva
Ferreira, Gislene
França, Bruno Alves
Mulinari, Evandro José
Gonçalves, Thiago Augusto
Squina, Fábio Márcio
Kadowaki, Marco Antonio Seiki
Maiorano, Alfredo
Polikarpov, Igor
Oliveira, Leandro Cristante de [UNESP]
Segato, Fernando
author_role author
author2 Oliva, Bianca
Gonçalves, Aline Larissa
Lima, Awana Silva
Ferreira, Gislene
França, Bruno Alves
Mulinari, Evandro José
Gonçalves, Thiago Augusto
Squina, Fábio Márcio
Kadowaki, Marco Antonio Seiki
Maiorano, Alfredo
Polikarpov, Igor
Oliveira, Leandro Cristante de [UNESP]
Segato, Fernando
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
Universidade Estadual de Campinas (UNICAMP)
Universidade de Sorocaba
Núcleo de Bionanomanufatura
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Velasco, Josman
Oliva, Bianca
Gonçalves, Aline Larissa
Lima, Awana Silva
Ferreira, Gislene
França, Bruno Alves
Mulinari, Evandro José
Gonçalves, Thiago Augusto
Squina, Fábio Márcio
Kadowaki, Marco Antonio Seiki
Maiorano, Alfredo
Polikarpov, Igor
Oliveira, Leandro Cristante de [UNESP]
Segato, Fernando
dc.subject.por.fl_str_mv Arabinan
Aspergillus nidulans
Exo-arabinanase
Sugar beet pulp
Thermothielavioides terrestris
topic Arabinan
Aspergillus nidulans
Exo-arabinanase
Sugar beet pulp
Thermothielavioides terrestris
description Abstract: Arabinanases from glycoside hydrolase family GH93 are enzymes with exo-activity that hydrolyze the α-1,5 bonds between arabinose residues present on arabinan. Currently, several initiatives aiming to use byproducts rich in arabinan such as pectin and sugar beet pulp as raw material to produce various compounds of interest are being developed. However, it is necessary to use robust enzymes that have an optimal performance under pH and temperature conditions used in the industrial processes. In this work, the first GH93 from the thermophilic fungus Thermothielavioides terrestris (Abn93T) was heterologously expressed in Aspergillus nidulans, purified and biochemically characterized. The enzyme is a thermophilic glycoprotein (optimum activity at 70 °C) with prolonged stability in acid pHs (4.0 to 6.5). The presence of glycosylation affected slightly the hydrolytic capacity of the enzyme, which was further increased by 34% in the presence of 1 mM CoCl2. Small-angle X-ray scattering results show that Abn93T is a globular-like-shaped protein with a slight bulge at one end. The hydrolytic mechanism of the enzyme was elucidated using capillary zone electrophoresis and molecular docking calculations. Abn93T has an ability to produce (in synergism with arabinofuranosidases) arabinose and arabinobiose from sugar beet arabinan, which can be explored as fermentable sugars and prebiotics. Key points: • Thermophilic exo-arabinanase from family GH93 • Molecular basis of arabinan depolymerization.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-12T01:35:12Z
2020-12-12T01:35:12Z
2020-10-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s00253-020-10806-6
Applied Microbiology and Biotechnology, v. 104, n. 19, p. 8309-8326, 2020.
1432-0614
0175-7598
http://hdl.handle.net/11449/199268
10.1007/s00253-020-10806-6
2-s2.0-85089502160
url http://dx.doi.org/10.1007/s00253-020-10806-6
http://hdl.handle.net/11449/199268
identifier_str_mv Applied Microbiology and Biotechnology, v. 104, n. 19, p. 8309-8326, 2020.
1432-0614
0175-7598
10.1007/s00253-020-10806-6
2-s2.0-85089502160
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Applied Microbiology and Biotechnology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 8309-8326
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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