CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.vetimm.2022.110462 http://hdl.handle.net/11449/242110 |
Resumo: | Two mutations in the CD4 bovine gene (G>T/Q306H; A>C/K310N) were identified as causative for altered staining with anti-CD4 mAb #CC8. We developed a HRM qPCR for genotyping these mutations and compare with immunophenotyping in different cattle breeds. The assay distinguished five genotypes, B (homozygous, G/A) and C (heterozygous, G/A and T/C), found in taurine, A (homozygous, G/C) and D (heterozygous, T/C and G/C), found in zebu. The E genotype (homozygous, T/C) was not observed in tested animals. As expected, B and C presented high/very high and intermediate CD4 staining, respectively. The lack/low CD4 staining was mainly related to the A, while the intermediate staining was mainly related to D genotype. The developed HRM qPCR assay accurately identified the altered phenotypes associated with CC8 staining in taurine. However, the assay cannot be applicable in zebu or hybrid breeds, probably due to additional mutations in the CD4 gene from zebu descendant animals. |
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Repositório Institucional da UNESP |
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CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identificationGenotypeImmunophenotypingQPCR, High Resolution MeltT helper cellsTwo mutations in the CD4 bovine gene (G>T/Q306H; A>C/K310N) were identified as causative for altered staining with anti-CD4 mAb #CC8. We developed a HRM qPCR for genotyping these mutations and compare with immunophenotyping in different cattle breeds. The assay distinguished five genotypes, B (homozygous, G/A) and C (heterozygous, G/A and T/C), found in taurine, A (homozygous, G/C) and D (heterozygous, T/C and G/C), found in zebu. The E genotype (homozygous, T/C) was not observed in tested animals. As expected, B and C presented high/very high and intermediate CD4 staining, respectively. The lack/low CD4 staining was mainly related to the A, while the intermediate staining was mainly related to D genotype. The developed HRM qPCR assay accurately identified the altered phenotypes associated with CC8 staining in taurine. However, the assay cannot be applicable in zebu or hybrid breeds, probably due to additional mutations in the CD4 gene from zebu descendant animals.Empresa Brasileira de Pesquisa AgropecuáriaFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Embrapa Pecuária Sudeste Rodovia Washington Luiz, Km 234, Fazenda CanchimCentro de Pesquisa e Desenvolvimento de Genética e Biotecnologia Instituto de Zootecnia (IZ), Rua Heitor Penteado, n. 56Departamento de Patologia Veterinária – Universidade Estadual Paulista “Júlio de Mesquita Filho”, Via de Acesso Prof. Paulo Donato Castellane s/nDepartamento de Zootecnia – Universidade Estadual Paulista “Júlio de Mesquita Filho”, Via de Acesso Prof. Paulo Donato Castellane s/nDepartamento de Patologia Veterinária – Universidade Estadual Paulista “Júlio de Mesquita Filho”, Via de Acesso Prof. Paulo Donato Castellane s/nDepartamento de Zootecnia – Universidade Estadual Paulista “Júlio de Mesquita Filho”, Via de Acesso Prof. Paulo Donato Castellane s/nEmpresa Brasileira de Pesquisa Agropecuária: 02.17.00.005.00.00FAPESP: 2016/07216-7Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Instituto de Zootecnia (IZ)Universidade Estadual Paulista (UNESP)Okino, Cintia HiromiMalagó Junior, WilsonMarcondes, Cintia RighettiGiglioti, RodrigoMontassier, Hélio José [UNESP]Oliveira, Henrique Nunes de [UNESP]Oliveira, Márcia Cristina de Sena2023-03-02T09:12:23Z2023-03-02T09:12:23Z2022-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.vetimm.2022.110462Veterinary Immunology and Immunopathology, v. 251.1873-25340165-2427http://hdl.handle.net/11449/24211010.1016/j.vetimm.2022.1104622-s2.0-85135357345Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengVeterinary Immunology and Immunopathologyinfo:eu-repo/semantics/openAccess2024-06-07T18:40:52Zoai:repositorio.unesp.br:11449/242110Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T16:34:05.978386Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification |
title |
CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification |
spellingShingle |
CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification Okino, Cintia Hiromi Genotype Immunophenotyping QPCR, High Resolution Melt T helper cells |
title_short |
CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification |
title_full |
CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification |
title_fullStr |
CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification |
title_full_unstemmed |
CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification |
title_sort |
CD4 bovine gene: Differential polymorphisms among cattle breeds and a new tool for rapid identification |
author |
Okino, Cintia Hiromi |
author_facet |
Okino, Cintia Hiromi Malagó Junior, Wilson Marcondes, Cintia Righetti Giglioti, Rodrigo Montassier, Hélio José [UNESP] Oliveira, Henrique Nunes de [UNESP] Oliveira, Márcia Cristina de Sena |
author_role |
author |
author2 |
Malagó Junior, Wilson Marcondes, Cintia Righetti Giglioti, Rodrigo Montassier, Hélio José [UNESP] Oliveira, Henrique Nunes de [UNESP] Oliveira, Márcia Cristina de Sena |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) Instituto de Zootecnia (IZ) Universidade Estadual Paulista (UNESP) |
dc.contributor.author.fl_str_mv |
Okino, Cintia Hiromi Malagó Junior, Wilson Marcondes, Cintia Righetti Giglioti, Rodrigo Montassier, Hélio José [UNESP] Oliveira, Henrique Nunes de [UNESP] Oliveira, Márcia Cristina de Sena |
dc.subject.por.fl_str_mv |
Genotype Immunophenotyping QPCR, High Resolution Melt T helper cells |
topic |
Genotype Immunophenotyping QPCR, High Resolution Melt T helper cells |
description |
Two mutations in the CD4 bovine gene (G>T/Q306H; A>C/K310N) were identified as causative for altered staining with anti-CD4 mAb #CC8. We developed a HRM qPCR for genotyping these mutations and compare with immunophenotyping in different cattle breeds. The assay distinguished five genotypes, B (homozygous, G/A) and C (heterozygous, G/A and T/C), found in taurine, A (homozygous, G/C) and D (heterozygous, T/C and G/C), found in zebu. The E genotype (homozygous, T/C) was not observed in tested animals. As expected, B and C presented high/very high and intermediate CD4 staining, respectively. The lack/low CD4 staining was mainly related to the A, while the intermediate staining was mainly related to D genotype. The developed HRM qPCR assay accurately identified the altered phenotypes associated with CC8 staining in taurine. However, the assay cannot be applicable in zebu or hybrid breeds, probably due to additional mutations in the CD4 gene from zebu descendant animals. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-09-01 2023-03-02T09:12:23Z 2023-03-02T09:12:23Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.vetimm.2022.110462 Veterinary Immunology and Immunopathology, v. 251. 1873-2534 0165-2427 http://hdl.handle.net/11449/242110 10.1016/j.vetimm.2022.110462 2-s2.0-85135357345 |
url |
http://dx.doi.org/10.1016/j.vetimm.2022.110462 http://hdl.handle.net/11449/242110 |
identifier_str_mv |
Veterinary Immunology and Immunopathology, v. 251. 1873-2534 0165-2427 10.1016/j.vetimm.2022.110462 2-s2.0-85135357345 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Veterinary Immunology and Immunopathology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128672053329920 |