Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre

Detalhes bibliográficos
Autor(a) principal: Dias, Regiane C B [UNESP]
Data de Publicação: 2019
Outros Autores: Vieira, Melissa A. [UNESP], Moro, Ana C. [UNESP], Ribolli, Danilo F M [UNESP], Monteiro, Aydir C M [UNESP], Camargo, Carlos H., Tiba-Casas, Monique R., Soares, Flávia B, Dos Santos, Luis F., Montelli, Augusto C. [UNESP], da Cunha, Maria de Lourdes R de S [UNESP], Barretti, Pasqual [UNESP], Hernandes, Rodrigo T. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1099/jmm.0.001043
http://hdl.handle.net/11449/189611
Resumo: Purpose. This study aimed to characterize 27 Escherichia coli isolates obtained from peritoneal dialysis (PD)-related peritonitis that occurred at the University Hospital of Botucatu Medical School, Brazil, between 1997 and 2015.Methodology. These isolates were characterized regarding the occurrence of 22 virulence factor-encoding genes, antimicrobial resistance and biofilm production. We then evaluated whether these factors influenced the clinical outcome.Results. Over an 18-year period, 726 episodes of PD-related peritonitis were diagnosed, with 27 of them (3.7 %) being due to E. coli. The majority of the isolates were classified in phylogroups B1 (33.3 %), B2 (30.0 %) or F (18.0 %). fimH (100.0 %), ompT (66.7 %) and irp2 (51.9 %) were the most prevalent genes, while papA, papC, iha, sat, irp2, iucD, ireA, ibe10, ompT and kpsMTII were significantly more prevalent among isolates belonging to phylogroups B2 and F (P<0.05). Non-susceptibility to quinolones was detected in six isolates, which harboured chromosomal and/or plasmid-mediated quinolone resistance determinants, while two CTX-M extended-spectrum β-lactamase-producing E. coli were identified. Virulence factor-encoding genes (alone or in combination) and antimicrobial resistance were not associated with non-resolution outcomes. However, there was a trend for the ability to produce biofilm to be associated with treatment failure, although this association was not statistically significant.Conclusion. The E. coli isolates were heterogeneous in terms of the features investigated, and were susceptible to most of the antimicrobial drugs tested, despite the unsuccessful treatment observed in more than 50.0 % of the patients. Studies including more cases could help to clarify if biofilm production can influence the outcome in patients with PD-related peritonitis.
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spelling Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centreantimicrobial resistanceEscherichia coliperitoneal dialysisperitonitisvirulence factorsPurpose. This study aimed to characterize 27 Escherichia coli isolates obtained from peritoneal dialysis (PD)-related peritonitis that occurred at the University Hospital of Botucatu Medical School, Brazil, between 1997 and 2015.Methodology. These isolates were characterized regarding the occurrence of 22 virulence factor-encoding genes, antimicrobial resistance and biofilm production. We then evaluated whether these factors influenced the clinical outcome.Results. Over an 18-year period, 726 episodes of PD-related peritonitis were diagnosed, with 27 of them (3.7 %) being due to E. coli. The majority of the isolates were classified in phylogroups B1 (33.3 %), B2 (30.0 %) or F (18.0 %). fimH (100.0 %), ompT (66.7 %) and irp2 (51.9 %) were the most prevalent genes, while papA, papC, iha, sat, irp2, iucD, ireA, ibe10, ompT and kpsMTII were significantly more prevalent among isolates belonging to phylogroups B2 and F (P<0.05). Non-susceptibility to quinolones was detected in six isolates, which harboured chromosomal and/or plasmid-mediated quinolone resistance determinants, while two CTX-M extended-spectrum β-lactamase-producing E. coli were identified. Virulence factor-encoding genes (alone or in combination) and antimicrobial resistance were not associated with non-resolution outcomes. However, there was a trend for the ability to produce biofilm to be associated with treatment failure, although this association was not statistically significant.Conclusion. The E. coli isolates were heterogeneous in terms of the features investigated, and were susceptible to most of the antimicrobial drugs tested, despite the unsuccessful treatment observed in more than 50.0 % of the patients. Studies including more cases could help to clarify if biofilm production can influence the outcome in patients with PD-related peritonitis.Departamento de Microbiologia e Imunologia Instituto de Biociências Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Centro de Bacteriologia, Instituto Adolfo Lutz, São Paulo, SP, BrazilDepartamento de Clínica Médica Faculdade de Medicina Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Departamento de Microbiologia e Imunologia Instituto de Biociências Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Departamento de Clínica Médica Faculdade de Medicina Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Universidade Estadual Paulista (Unesp)Dias, Regiane C B [UNESP]Vieira, Melissa A. [UNESP]Moro, Ana C. [UNESP]Ribolli, Danilo F M [UNESP]Monteiro, Aydir C M [UNESP]Camargo, Carlos H.Tiba-Casas, Monique R.Soares, Flávia BDos Santos, Luis F.Montelli, Augusto C. [UNESP]da Cunha, Maria de Lourdes R de S [UNESP]Barretti, Pasqual [UNESP]Hernandes, Rodrigo T. [UNESP]2019-10-06T16:46:14Z2019-10-06T16:46:14Z2019-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1330-1340http://dx.doi.org/10.1099/jmm.0.001043Journal of medical microbiology, v. 68, n. 9, p. 1330-1340, 2019.1473-5644http://hdl.handle.net/11449/18961110.1099/jmm.0.0010432-s2.0-8507178306554964119838934790000-0003-4979-4836Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of medical microbiologyinfo:eu-repo/semantics/openAccess2021-10-23T09:20:13Zoai:repositorio.unesp.br:11449/189611Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:16:37.950945Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
title Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
spellingShingle Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
Dias, Regiane C B [UNESP]
antimicrobial resistance
Escherichia coli
peritoneal dialysis
peritonitis
virulence factors
title_short Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
title_full Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
title_fullStr Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
title_full_unstemmed Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
title_sort Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
author Dias, Regiane C B [UNESP]
author_facet Dias, Regiane C B [UNESP]
Vieira, Melissa A. [UNESP]
Moro, Ana C. [UNESP]
Ribolli, Danilo F M [UNESP]
Monteiro, Aydir C M [UNESP]
Camargo, Carlos H.
Tiba-Casas, Monique R.
Soares, Flávia B
Dos Santos, Luis F.
Montelli, Augusto C. [UNESP]
da Cunha, Maria de Lourdes R de S [UNESP]
Barretti, Pasqual [UNESP]
Hernandes, Rodrigo T. [UNESP]
author_role author
author2 Vieira, Melissa A. [UNESP]
Moro, Ana C. [UNESP]
Ribolli, Danilo F M [UNESP]
Monteiro, Aydir C M [UNESP]
Camargo, Carlos H.
Tiba-Casas, Monique R.
Soares, Flávia B
Dos Santos, Luis F.
Montelli, Augusto C. [UNESP]
da Cunha, Maria de Lourdes R de S [UNESP]
Barretti, Pasqual [UNESP]
Hernandes, Rodrigo T. [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Dias, Regiane C B [UNESP]
Vieira, Melissa A. [UNESP]
Moro, Ana C. [UNESP]
Ribolli, Danilo F M [UNESP]
Monteiro, Aydir C M [UNESP]
Camargo, Carlos H.
Tiba-Casas, Monique R.
Soares, Flávia B
Dos Santos, Luis F.
Montelli, Augusto C. [UNESP]
da Cunha, Maria de Lourdes R de S [UNESP]
Barretti, Pasqual [UNESP]
Hernandes, Rodrigo T. [UNESP]
dc.subject.por.fl_str_mv antimicrobial resistance
Escherichia coli
peritoneal dialysis
peritonitis
virulence factors
topic antimicrobial resistance
Escherichia coli
peritoneal dialysis
peritonitis
virulence factors
description Purpose. This study aimed to characterize 27 Escherichia coli isolates obtained from peritoneal dialysis (PD)-related peritonitis that occurred at the University Hospital of Botucatu Medical School, Brazil, between 1997 and 2015.Methodology. These isolates were characterized regarding the occurrence of 22 virulence factor-encoding genes, antimicrobial resistance and biofilm production. We then evaluated whether these factors influenced the clinical outcome.Results. Over an 18-year period, 726 episodes of PD-related peritonitis were diagnosed, with 27 of them (3.7 %) being due to E. coli. The majority of the isolates were classified in phylogroups B1 (33.3 %), B2 (30.0 %) or F (18.0 %). fimH (100.0 %), ompT (66.7 %) and irp2 (51.9 %) were the most prevalent genes, while papA, papC, iha, sat, irp2, iucD, ireA, ibe10, ompT and kpsMTII were significantly more prevalent among isolates belonging to phylogroups B2 and F (P<0.05). Non-susceptibility to quinolones was detected in six isolates, which harboured chromosomal and/or plasmid-mediated quinolone resistance determinants, while two CTX-M extended-spectrum β-lactamase-producing E. coli were identified. Virulence factor-encoding genes (alone or in combination) and antimicrobial resistance were not associated with non-resolution outcomes. However, there was a trend for the ability to produce biofilm to be associated with treatment failure, although this association was not statistically significant.Conclusion. The E. coli isolates were heterogeneous in terms of the features investigated, and were susceptible to most of the antimicrobial drugs tested, despite the unsuccessful treatment observed in more than 50.0 % of the patients. Studies including more cases could help to clarify if biofilm production can influence the outcome in patients with PD-related peritonitis.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T16:46:14Z
2019-10-06T16:46:14Z
2019-09-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1099/jmm.0.001043
Journal of medical microbiology, v. 68, n. 9, p. 1330-1340, 2019.
1473-5644
http://hdl.handle.net/11449/189611
10.1099/jmm.0.001043
2-s2.0-85071783065
5496411983893479
0000-0003-4979-4836
url http://dx.doi.org/10.1099/jmm.0.001043
http://hdl.handle.net/11449/189611
identifier_str_mv Journal of medical microbiology, v. 68, n. 9, p. 1330-1340, 2019.
1473-5644
10.1099/jmm.0.001043
2-s2.0-85071783065
5496411983893479
0000-0003-4979-4836
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of medical microbiology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1330-1340
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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