Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre
Autor(a) principal: | |
---|---|
Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1099/jmm.0.001043 http://hdl.handle.net/11449/189611 |
Resumo: | Purpose. This study aimed to characterize 27 Escherichia coli isolates obtained from peritoneal dialysis (PD)-related peritonitis that occurred at the University Hospital of Botucatu Medical School, Brazil, between 1997 and 2015.Methodology. These isolates were characterized regarding the occurrence of 22 virulence factor-encoding genes, antimicrobial resistance and biofilm production. We then evaluated whether these factors influenced the clinical outcome.Results. Over an 18-year period, 726 episodes of PD-related peritonitis were diagnosed, with 27 of them (3.7 %) being due to E. coli. The majority of the isolates were classified in phylogroups B1 (33.3 %), B2 (30.0 %) or F (18.0 %). fimH (100.0 %), ompT (66.7 %) and irp2 (51.9 %) were the most prevalent genes, while papA, papC, iha, sat, irp2, iucD, ireA, ibe10, ompT and kpsMTII were significantly more prevalent among isolates belonging to phylogroups B2 and F (P<0.05). Non-susceptibility to quinolones was detected in six isolates, which harboured chromosomal and/or plasmid-mediated quinolone resistance determinants, while two CTX-M extended-spectrum β-lactamase-producing E. coli were identified. Virulence factor-encoding genes (alone or in combination) and antimicrobial resistance were not associated with non-resolution outcomes. However, there was a trend for the ability to produce biofilm to be associated with treatment failure, although this association was not statistically significant.Conclusion. The E. coli isolates were heterogeneous in terms of the features investigated, and were susceptible to most of the antimicrobial drugs tested, despite the unsuccessful treatment observed in more than 50.0 % of the patients. Studies including more cases could help to clarify if biofilm production can influence the outcome in patients with PD-related peritonitis. |
id |
UNSP_c9b26a363044e9b90fef987222981965 |
---|---|
oai_identifier_str |
oai:repositorio.unesp.br:11449/189611 |
network_acronym_str |
UNSP |
network_name_str |
Repositório Institucional da UNESP |
repository_id_str |
2946 |
spelling |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centreantimicrobial resistanceEscherichia coliperitoneal dialysisperitonitisvirulence factorsPurpose. This study aimed to characterize 27 Escherichia coli isolates obtained from peritoneal dialysis (PD)-related peritonitis that occurred at the University Hospital of Botucatu Medical School, Brazil, between 1997 and 2015.Methodology. These isolates were characterized regarding the occurrence of 22 virulence factor-encoding genes, antimicrobial resistance and biofilm production. We then evaluated whether these factors influenced the clinical outcome.Results. Over an 18-year period, 726 episodes of PD-related peritonitis were diagnosed, with 27 of them (3.7 %) being due to E. coli. The majority of the isolates were classified in phylogroups B1 (33.3 %), B2 (30.0 %) or F (18.0 %). fimH (100.0 %), ompT (66.7 %) and irp2 (51.9 %) were the most prevalent genes, while papA, papC, iha, sat, irp2, iucD, ireA, ibe10, ompT and kpsMTII were significantly more prevalent among isolates belonging to phylogroups B2 and F (P<0.05). Non-susceptibility to quinolones was detected in six isolates, which harboured chromosomal and/or plasmid-mediated quinolone resistance determinants, while two CTX-M extended-spectrum β-lactamase-producing E. coli were identified. Virulence factor-encoding genes (alone or in combination) and antimicrobial resistance were not associated with non-resolution outcomes. However, there was a trend for the ability to produce biofilm to be associated with treatment failure, although this association was not statistically significant.Conclusion. The E. coli isolates were heterogeneous in terms of the features investigated, and were susceptible to most of the antimicrobial drugs tested, despite the unsuccessful treatment observed in more than 50.0 % of the patients. Studies including more cases could help to clarify if biofilm production can influence the outcome in patients with PD-related peritonitis.Departamento de Microbiologia e Imunologia Instituto de Biociências Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Centro de Bacteriologia, Instituto Adolfo Lutz, São Paulo, SP, BrazilDepartamento de Clínica Médica Faculdade de Medicina Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Departamento de Microbiologia e Imunologia Instituto de Biociências Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Departamento de Clínica Médica Faculdade de Medicina Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Universidade Estadual Paulista (Unesp)Dias, Regiane C B [UNESP]Vieira, Melissa A. [UNESP]Moro, Ana C. [UNESP]Ribolli, Danilo F M [UNESP]Monteiro, Aydir C M [UNESP]Camargo, Carlos H.Tiba-Casas, Monique R.Soares, Flávia BDos Santos, Luis F.Montelli, Augusto C. [UNESP]da Cunha, Maria de Lourdes R de S [UNESP]Barretti, Pasqual [UNESP]Hernandes, Rodrigo T. [UNESP]2019-10-06T16:46:14Z2019-10-06T16:46:14Z2019-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1330-1340http://dx.doi.org/10.1099/jmm.0.001043Journal of medical microbiology, v. 68, n. 9, p. 1330-1340, 2019.1473-5644http://hdl.handle.net/11449/18961110.1099/jmm.0.0010432-s2.0-8507178306554964119838934790000-0003-4979-4836Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of medical microbiologyinfo:eu-repo/semantics/openAccess2021-10-23T09:20:13Zoai:repositorio.unesp.br:11449/189611Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:16:37.950945Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre |
title |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre |
spellingShingle |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre Dias, Regiane C B [UNESP] antimicrobial resistance Escherichia coli peritoneal dialysis peritonitis virulence factors |
title_short |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre |
title_full |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre |
title_fullStr |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre |
title_full_unstemmed |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre |
title_sort |
Characterization of Escherichia coli obtained from patients undergoing peritoneal dialysis and diagnosed with peritonitis in a Brazilian centre |
author |
Dias, Regiane C B [UNESP] |
author_facet |
Dias, Regiane C B [UNESP] Vieira, Melissa A. [UNESP] Moro, Ana C. [UNESP] Ribolli, Danilo F M [UNESP] Monteiro, Aydir C M [UNESP] Camargo, Carlos H. Tiba-Casas, Monique R. Soares, Flávia B Dos Santos, Luis F. Montelli, Augusto C. [UNESP] da Cunha, Maria de Lourdes R de S [UNESP] Barretti, Pasqual [UNESP] Hernandes, Rodrigo T. [UNESP] |
author_role |
author |
author2 |
Vieira, Melissa A. [UNESP] Moro, Ana C. [UNESP] Ribolli, Danilo F M [UNESP] Monteiro, Aydir C M [UNESP] Camargo, Carlos H. Tiba-Casas, Monique R. Soares, Flávia B Dos Santos, Luis F. Montelli, Augusto C. [UNESP] da Cunha, Maria de Lourdes R de S [UNESP] Barretti, Pasqual [UNESP] Hernandes, Rodrigo T. [UNESP] |
author2_role |
author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Dias, Regiane C B [UNESP] Vieira, Melissa A. [UNESP] Moro, Ana C. [UNESP] Ribolli, Danilo F M [UNESP] Monteiro, Aydir C M [UNESP] Camargo, Carlos H. Tiba-Casas, Monique R. Soares, Flávia B Dos Santos, Luis F. Montelli, Augusto C. [UNESP] da Cunha, Maria de Lourdes R de S [UNESP] Barretti, Pasqual [UNESP] Hernandes, Rodrigo T. [UNESP] |
dc.subject.por.fl_str_mv |
antimicrobial resistance Escherichia coli peritoneal dialysis peritonitis virulence factors |
topic |
antimicrobial resistance Escherichia coli peritoneal dialysis peritonitis virulence factors |
description |
Purpose. This study aimed to characterize 27 Escherichia coli isolates obtained from peritoneal dialysis (PD)-related peritonitis that occurred at the University Hospital of Botucatu Medical School, Brazil, between 1997 and 2015.Methodology. These isolates were characterized regarding the occurrence of 22 virulence factor-encoding genes, antimicrobial resistance and biofilm production. We then evaluated whether these factors influenced the clinical outcome.Results. Over an 18-year period, 726 episodes of PD-related peritonitis were diagnosed, with 27 of them (3.7 %) being due to E. coli. The majority of the isolates were classified in phylogroups B1 (33.3 %), B2 (30.0 %) or F (18.0 %). fimH (100.0 %), ompT (66.7 %) and irp2 (51.9 %) were the most prevalent genes, while papA, papC, iha, sat, irp2, iucD, ireA, ibe10, ompT and kpsMTII were significantly more prevalent among isolates belonging to phylogroups B2 and F (P<0.05). Non-susceptibility to quinolones was detected in six isolates, which harboured chromosomal and/or plasmid-mediated quinolone resistance determinants, while two CTX-M extended-spectrum β-lactamase-producing E. coli were identified. Virulence factor-encoding genes (alone or in combination) and antimicrobial resistance were not associated with non-resolution outcomes. However, there was a trend for the ability to produce biofilm to be associated with treatment failure, although this association was not statistically significant.Conclusion. The E. coli isolates were heterogeneous in terms of the features investigated, and were susceptible to most of the antimicrobial drugs tested, despite the unsuccessful treatment observed in more than 50.0 % of the patients. Studies including more cases could help to clarify if biofilm production can influence the outcome in patients with PD-related peritonitis. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T16:46:14Z 2019-10-06T16:46:14Z 2019-09-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1099/jmm.0.001043 Journal of medical microbiology, v. 68, n. 9, p. 1330-1340, 2019. 1473-5644 http://hdl.handle.net/11449/189611 10.1099/jmm.0.001043 2-s2.0-85071783065 5496411983893479 0000-0003-4979-4836 |
url |
http://dx.doi.org/10.1099/jmm.0.001043 http://hdl.handle.net/11449/189611 |
identifier_str_mv |
Journal of medical microbiology, v. 68, n. 9, p. 1330-1340, 2019. 1473-5644 10.1099/jmm.0.001043 2-s2.0-85071783065 5496411983893479 0000-0003-4979-4836 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of medical microbiology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1330-1340 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129412515758080 |