Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/0100-5405/185131 http://hdl.handle.net/11449/199556 |
Resumo: | Thanatephorus target spot is one of the most important diseases of rubber tree (Hevea brasiliensis) in the Amazon. However, an important question about the actual phylogenetic placement of this pathogen has not been answered yet. In this study, we analyzed the patterns of genetic variation in sequences of the ITS-5.8S rDNA region from a population of T. cucumeris (asexual phase = Rhizoctonia solani AG 2-2) associated with the rubber tree target spot sampled in Belém (Pará), Manaus (Amazonas) and Xapuri/Rio Branco (Acre), phylogenetically comparing with worldwide described members of AG 2. This study represents an important step to reveal the etiology of the asexual phase of T. cucumeris in the rubber tree. Phylogenetically, based on Bayesian analyses, we found support to nominate a new group of R. solani anastomosis associated with rubber tree target spot: AG 2-2 Hb. This group consisted of an independent evolutionary unit in relation to the worldwide described sub-groups of AG 2-2. Considering the gene genealogy built by coalescent analysis, we observed that the population of R. solani AG 2-2 Hb from Belém was relatively older than the other two analyzed populations. The common ancestor of all three populations is associated with passion-fruit (Passiflora edulis) foliar blight in Belém and has about 0.8 coalescent evolutionary units of age. No haplotype of the ITS-5.8S region of AG 2-2 Hb from Belém was observed in any other region. However, the population from Manaus shared two of its four haplotypes with those observed in Xapuri/Rio Branco, Acre, indicating gene flow. |
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Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the PathogenMancha areolada de Thanatephorus da seringueira na Amazônia: Identificação filogenética e variação genética em populações do patógenoAnastomosis groupsRhizoctonia solaniRibosomal DNAThanatephorus cucumerisThanatephorus target spot is one of the most important diseases of rubber tree (Hevea brasiliensis) in the Amazon. However, an important question about the actual phylogenetic placement of this pathogen has not been answered yet. In this study, we analyzed the patterns of genetic variation in sequences of the ITS-5.8S rDNA region from a population of T. cucumeris (asexual phase = Rhizoctonia solani AG 2-2) associated with the rubber tree target spot sampled in Belém (Pará), Manaus (Amazonas) and Xapuri/Rio Branco (Acre), phylogenetically comparing with worldwide described members of AG 2. This study represents an important step to reveal the etiology of the asexual phase of T. cucumeris in the rubber tree. Phylogenetically, based on Bayesian analyses, we found support to nominate a new group of R. solani anastomosis associated with rubber tree target spot: AG 2-2 Hb. This group consisted of an independent evolutionary unit in relation to the worldwide described sub-groups of AG 2-2. Considering the gene genealogy built by coalescent analysis, we observed that the population of R. solani AG 2-2 Hb from Belém was relatively older than the other two analyzed populations. The common ancestor of all three populations is associated with passion-fruit (Passiflora edulis) foliar blight in Belém and has about 0.8 coalescent evolutionary units of age. No haplotype of the ITS-5.8S region of AG 2-2 Hb from Belém was observed in any other region. However, the population from Manaus shared two of its four haplotypes with those observed in Xapuri/Rio Branco, Acre, indicating gene flow.Coordenadoria de Defesa Agropecuária Escritório de Defesa Agropecuária (EDA) de Araçatuba, Av. Governador Mário Covas 2600Universidade Estadual Paulista (UNESP) Campus de Ilha Solteira Departamento de Fitossanidade Engenharia Rural e SolosEmpresa Brasileira de Pesquisa Agropecuária Embrapa Amazônia Ocidental, Rod. AM-010 km 29 (Estr. Manaus/Itacoatiara), CP 319Universidade Estadual Paulista (UNESP) Campus de Ilha Solteira Departamento de Fitossanidade Engenharia Rural e SolosEscritório de Defesa Agropecuária (EDA) de AraçatubaUniversidade Estadual Paulista (Unesp)Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Basseto, Marco AntonioVicentini, Samara Nunes Campos [UNESP]Gasparotto, LuadirCeresini, Paulo Cezar2020-12-12T01:43:09Z2020-12-12T01:43:09Z2019-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article285-294application/pdfhttp://dx.doi.org/10.1590/0100-5405/185131Summa Phytopathologica, v. 45, n. 3, p. 285-294, 2019.0100-5405http://hdl.handle.net/11449/19955610.1590/0100-5405/185131S0100-540520190003002852-s2.0-85073988505S0100-54052019000300285.pdf26350920583008540000-0003-2381-2792Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPporSumma Phytopathologicainfo:eu-repo/semantics/openAccess2024-07-05T18:12:41Zoai:repositorio.unesp.br:11449/199556Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:15:09.560811Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen Mancha areolada de Thanatephorus da seringueira na Amazônia: Identificação filogenética e variação genética em populações do patógeno |
title |
Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen |
spellingShingle |
Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen Basseto, Marco Antonio Anastomosis groups Rhizoctonia solani Ribosomal DNA Thanatephorus cucumeris |
title_short |
Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen |
title_full |
Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen |
title_fullStr |
Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen |
title_full_unstemmed |
Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen |
title_sort |
Thanatephorus target spot on rubber tree in the Amazon: Phylogenetics and genetic variation in populations of the Pathogen |
author |
Basseto, Marco Antonio |
author_facet |
Basseto, Marco Antonio Vicentini, Samara Nunes Campos [UNESP] Gasparotto, Luadir Ceresini, Paulo Cezar |
author_role |
author |
author2 |
Vicentini, Samara Nunes Campos [UNESP] Gasparotto, Luadir Ceresini, Paulo Cezar |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Escritório de Defesa Agropecuária (EDA) de Araçatuba Universidade Estadual Paulista (Unesp) Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) |
dc.contributor.author.fl_str_mv |
Basseto, Marco Antonio Vicentini, Samara Nunes Campos [UNESP] Gasparotto, Luadir Ceresini, Paulo Cezar |
dc.subject.por.fl_str_mv |
Anastomosis groups Rhizoctonia solani Ribosomal DNA Thanatephorus cucumeris |
topic |
Anastomosis groups Rhizoctonia solani Ribosomal DNA Thanatephorus cucumeris |
description |
Thanatephorus target spot is one of the most important diseases of rubber tree (Hevea brasiliensis) in the Amazon. However, an important question about the actual phylogenetic placement of this pathogen has not been answered yet. In this study, we analyzed the patterns of genetic variation in sequences of the ITS-5.8S rDNA region from a population of T. cucumeris (asexual phase = Rhizoctonia solani AG 2-2) associated with the rubber tree target spot sampled in Belém (Pará), Manaus (Amazonas) and Xapuri/Rio Branco (Acre), phylogenetically comparing with worldwide described members of AG 2. This study represents an important step to reveal the etiology of the asexual phase of T. cucumeris in the rubber tree. Phylogenetically, based on Bayesian analyses, we found support to nominate a new group of R. solani anastomosis associated with rubber tree target spot: AG 2-2 Hb. This group consisted of an independent evolutionary unit in relation to the worldwide described sub-groups of AG 2-2. Considering the gene genealogy built by coalescent analysis, we observed that the population of R. solani AG 2-2 Hb from Belém was relatively older than the other two analyzed populations. The common ancestor of all three populations is associated with passion-fruit (Passiflora edulis) foliar blight in Belém and has about 0.8 coalescent evolutionary units of age. No haplotype of the ITS-5.8S region of AG 2-2 Hb from Belém was observed in any other region. However, the population from Manaus shared two of its four haplotypes with those observed in Xapuri/Rio Branco, Acre, indicating gene flow. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-07-01 2020-12-12T01:43:09Z 2020-12-12T01:43:09Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/0100-5405/185131 Summa Phytopathologica, v. 45, n. 3, p. 285-294, 2019. 0100-5405 http://hdl.handle.net/11449/199556 10.1590/0100-5405/185131 S0100-54052019000300285 2-s2.0-85073988505 S0100-54052019000300285.pdf 2635092058300854 0000-0003-2381-2792 |
url |
http://dx.doi.org/10.1590/0100-5405/185131 http://hdl.handle.net/11449/199556 |
identifier_str_mv |
Summa Phytopathologica, v. 45, n. 3, p. 285-294, 2019. 0100-5405 10.1590/0100-5405/185131 S0100-54052019000300285 2-s2.0-85073988505 S0100-54052019000300285.pdf 2635092058300854 0000-0003-2381-2792 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.none.fl_str_mv |
Summa Phytopathologica |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
285-294 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128487611957248 |