New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods

Detalhes bibliográficos
Autor(a) principal: Padilha, Elias C. [UNESP]
Data de Publicação: 2016
Outros Autores: Serafim, Rodolfo B., Sarmiento, Deisy Y. R., Santos, Cesar F., Santos, Cleydson B. R., Silva, Carlos H. T. P.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.5935/0103-5053.20160043
http://hdl.handle.net/11449/161982
Resumo: The peroxisome proliferator-activated receptor gamma (PPAR gamma) is a nuclear receptor that acts as a transcription factor, regulating glucose, lipid and inflammation signaling and it is exploited in type 2 diabetes treatment. However, the selective activation of this PPAR subtype has been linked to important adverse effects which can be mitigated through concomitant activation of PPAR alpha and PPAR delta. In this study, we proposed new PPAR gamma agonists using PharmaGist Server for pharmacophore prediction, the molecular docking was performed by GOLD (genetic optimization for ligand docking) v2.2, AutoDock 4.2 and AutoDock Vina 1.1 and QikProp v4.0 and Derek for absorption, distribution, metabolism, excretion and toxicity (ADMET) assessment. One molecule showed high predicted affinity to PPAR gamma and favorable pharmacokinetic and toxicity properties. It was then evaluated against PPAR alpha and PPAR delta and showed greater affinity to these receptors than the controls. Therefore this molecule is a promising drug lead for the development of derivatives and for the treatment of metabolic syndrome with the benefits of a PPAR pan activation.
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spelling New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methodstype 2 diabetesPPAR pan agonistmolecular modelingADMET predictionThe peroxisome proliferator-activated receptor gamma (PPAR gamma) is a nuclear receptor that acts as a transcription factor, regulating glucose, lipid and inflammation signaling and it is exploited in type 2 diabetes treatment. However, the selective activation of this PPAR subtype has been linked to important adverse effects which can be mitigated through concomitant activation of PPAR alpha and PPAR delta. In this study, we proposed new PPAR gamma agonists using PharmaGist Server for pharmacophore prediction, the molecular docking was performed by GOLD (genetic optimization for ligand docking) v2.2, AutoDock 4.2 and AutoDock Vina 1.1 and QikProp v4.0 and Derek for absorption, distribution, metabolism, excretion and toxicity (ADMET) assessment. One molecule showed high predicted affinity to PPAR gamma and favorable pharmacokinetic and toxicity properties. It was then evaluated against PPAR alpha and PPAR delta and showed greater affinity to these receptors than the controls. Therefore this molecule is a promising drug lead for the development of derivatives and for the treatment of metabolic syndrome with the benefits of a PPAR pan activation.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Estadual Paulista, Dept Principios Ativos Nat & Toxicol, Fac Ciencias Farmaceut, Rodovia Araraquara Jau Km 1, BR-14801902 Araraquara, SP, BrazilUniv Sao Paulo, Fac Ciencias Farmaceut Ribeirao Preto, Dept Ciencias Farmaceut, Av Prof Cafe, BR-14040903 Ribeirao Preto, SP, BrazilUniv Sao Paulo, Fac Med Ribeirao Preto, Dept Biol Celular & Mol & Bioagentes Patogen, Av Bandeirantes 3900, BR-14049900 Ribeirao Preto, SP, BrazilUniv Sao Paulo, Fac Med Ribeirao Preto, Dept Bioquim & Imunol, Av Bandeirantes 3900, BR-14049900 Ribeirao Preto, SP, BrazilUniv Fed Amapa, Dept Ciencias Biol, Lab Modelagem & Quim Computat, Rod Juscelino Kubitschek,Km 02,Jardim Marco Zero, BR-68902280 Macapa, AP, BrazilUniv Estadual Paulista, Dept Principios Ativos Nat & Toxicol, Fac Ciencias Farmaceut, Rodovia Araraquara Jau Km 1, BR-14801902 Araraquara, SP, BrazilSoc Brasileira QuimicaUniversidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)Univ Fed AmapaPadilha, Elias C. [UNESP]Serafim, Rodolfo B.Sarmiento, Deisy Y. R.Santos, Cesar F.Santos, Cleydson B. R.Silva, Carlos H. T. P.2018-11-26T17:06:25Z2018-11-26T17:06:25Z2016-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1636-1647application/pdfhttp://dx.doi.org/10.5935/0103-5053.20160043Journal Of The Brazilian Chemical Society. Sao Paulo: Soc Brasileira Quimica, v. 27, n. 9, p. 1636-1647, 2016.0103-5053http://hdl.handle.net/11449/16198210.5935/0103-5053.20160043S0103-50532016000901636WOS:000384585800014S0103-50532016000901636.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal Of The Brazilian Chemical Society0,357info:eu-repo/semantics/openAccess2024-06-24T14:51:42Zoai:repositorio.unesp.br:11449/161982Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:39:25.045025Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
title New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
spellingShingle New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
Padilha, Elias C. [UNESP]
type 2 diabetes
PPAR pan agonist
molecular modeling
ADMET prediction
title_short New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
title_full New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
title_fullStr New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
title_full_unstemmed New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
title_sort New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
author Padilha, Elias C. [UNESP]
author_facet Padilha, Elias C. [UNESP]
Serafim, Rodolfo B.
Sarmiento, Deisy Y. R.
Santos, Cesar F.
Santos, Cleydson B. R.
Silva, Carlos H. T. P.
author_role author
author2 Serafim, Rodolfo B.
Sarmiento, Deisy Y. R.
Santos, Cesar F.
Santos, Cleydson B. R.
Silva, Carlos H. T. P.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade de São Paulo (USP)
Univ Fed Amapa
dc.contributor.author.fl_str_mv Padilha, Elias C. [UNESP]
Serafim, Rodolfo B.
Sarmiento, Deisy Y. R.
Santos, Cesar F.
Santos, Cleydson B. R.
Silva, Carlos H. T. P.
dc.subject.por.fl_str_mv type 2 diabetes
PPAR pan agonist
molecular modeling
ADMET prediction
topic type 2 diabetes
PPAR pan agonist
molecular modeling
ADMET prediction
description The peroxisome proliferator-activated receptor gamma (PPAR gamma) is a nuclear receptor that acts as a transcription factor, regulating glucose, lipid and inflammation signaling and it is exploited in type 2 diabetes treatment. However, the selective activation of this PPAR subtype has been linked to important adverse effects which can be mitigated through concomitant activation of PPAR alpha and PPAR delta. In this study, we proposed new PPAR gamma agonists using PharmaGist Server for pharmacophore prediction, the molecular docking was performed by GOLD (genetic optimization for ligand docking) v2.2, AutoDock 4.2 and AutoDock Vina 1.1 and QikProp v4.0 and Derek for absorption, distribution, metabolism, excretion and toxicity (ADMET) assessment. One molecule showed high predicted affinity to PPAR gamma and favorable pharmacokinetic and toxicity properties. It was then evaluated against PPAR alpha and PPAR delta and showed greater affinity to these receptors than the controls. Therefore this molecule is a promising drug lead for the development of derivatives and for the treatment of metabolic syndrome with the benefits of a PPAR pan activation.
publishDate 2016
dc.date.none.fl_str_mv 2016-09-01
2018-11-26T17:06:25Z
2018-11-26T17:06:25Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.5935/0103-5053.20160043
Journal Of The Brazilian Chemical Society. Sao Paulo: Soc Brasileira Quimica, v. 27, n. 9, p. 1636-1647, 2016.
0103-5053
http://hdl.handle.net/11449/161982
10.5935/0103-5053.20160043
S0103-50532016000901636
WOS:000384585800014
S0103-50532016000901636.pdf
url http://dx.doi.org/10.5935/0103-5053.20160043
http://hdl.handle.net/11449/161982
identifier_str_mv Journal Of The Brazilian Chemical Society. Sao Paulo: Soc Brasileira Quimica, v. 27, n. 9, p. 1636-1647, 2016.
0103-5053
10.5935/0103-5053.20160043
S0103-50532016000901636
WOS:000384585800014
S0103-50532016000901636.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal Of The Brazilian Chemical Society
0,357
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1636-1647
application/pdf
dc.publisher.none.fl_str_mv Soc Brasileira Quimica
publisher.none.fl_str_mv Soc Brasileira Quimica
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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