New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.5935/0103-5053.20160043 http://hdl.handle.net/11449/161982 |
Resumo: | The peroxisome proliferator-activated receptor gamma (PPAR gamma) is a nuclear receptor that acts as a transcription factor, regulating glucose, lipid and inflammation signaling and it is exploited in type 2 diabetes treatment. However, the selective activation of this PPAR subtype has been linked to important adverse effects which can be mitigated through concomitant activation of PPAR alpha and PPAR delta. In this study, we proposed new PPAR gamma agonists using PharmaGist Server for pharmacophore prediction, the molecular docking was performed by GOLD (genetic optimization for ligand docking) v2.2, AutoDock 4.2 and AutoDock Vina 1.1 and QikProp v4.0 and Derek for absorption, distribution, metabolism, excretion and toxicity (ADMET) assessment. One molecule showed high predicted affinity to PPAR gamma and favorable pharmacokinetic and toxicity properties. It was then evaluated against PPAR alpha and PPAR delta and showed greater affinity to these receptors than the controls. Therefore this molecule is a promising drug lead for the development of derivatives and for the treatment of metabolic syndrome with the benefits of a PPAR pan activation. |
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New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methodstype 2 diabetesPPAR pan agonistmolecular modelingADMET predictionThe peroxisome proliferator-activated receptor gamma (PPAR gamma) is a nuclear receptor that acts as a transcription factor, regulating glucose, lipid and inflammation signaling and it is exploited in type 2 diabetes treatment. However, the selective activation of this PPAR subtype has been linked to important adverse effects which can be mitigated through concomitant activation of PPAR alpha and PPAR delta. In this study, we proposed new PPAR gamma agonists using PharmaGist Server for pharmacophore prediction, the molecular docking was performed by GOLD (genetic optimization for ligand docking) v2.2, AutoDock 4.2 and AutoDock Vina 1.1 and QikProp v4.0 and Derek for absorption, distribution, metabolism, excretion and toxicity (ADMET) assessment. One molecule showed high predicted affinity to PPAR gamma and favorable pharmacokinetic and toxicity properties. It was then evaluated against PPAR alpha and PPAR delta and showed greater affinity to these receptors than the controls. Therefore this molecule is a promising drug lead for the development of derivatives and for the treatment of metabolic syndrome with the benefits of a PPAR pan activation.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Estadual Paulista, Dept Principios Ativos Nat & Toxicol, Fac Ciencias Farmaceut, Rodovia Araraquara Jau Km 1, BR-14801902 Araraquara, SP, BrazilUniv Sao Paulo, Fac Ciencias Farmaceut Ribeirao Preto, Dept Ciencias Farmaceut, Av Prof Cafe, BR-14040903 Ribeirao Preto, SP, BrazilUniv Sao Paulo, Fac Med Ribeirao Preto, Dept Biol Celular & Mol & Bioagentes Patogen, Av Bandeirantes 3900, BR-14049900 Ribeirao Preto, SP, BrazilUniv Sao Paulo, Fac Med Ribeirao Preto, Dept Bioquim & Imunol, Av Bandeirantes 3900, BR-14049900 Ribeirao Preto, SP, BrazilUniv Fed Amapa, Dept Ciencias Biol, Lab Modelagem & Quim Computat, Rod Juscelino Kubitschek,Km 02,Jardim Marco Zero, BR-68902280 Macapa, AP, BrazilUniv Estadual Paulista, Dept Principios Ativos Nat & Toxicol, Fac Ciencias Farmaceut, Rodovia Araraquara Jau Km 1, BR-14801902 Araraquara, SP, BrazilSoc Brasileira QuimicaUniversidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)Univ Fed AmapaPadilha, Elias C. [UNESP]Serafim, Rodolfo B.Sarmiento, Deisy Y. R.Santos, Cesar F.Santos, Cleydson B. R.Silva, Carlos H. T. P.2018-11-26T17:06:25Z2018-11-26T17:06:25Z2016-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1636-1647application/pdfhttp://dx.doi.org/10.5935/0103-5053.20160043Journal Of The Brazilian Chemical Society. Sao Paulo: Soc Brasileira Quimica, v. 27, n. 9, p. 1636-1647, 2016.0103-5053http://hdl.handle.net/11449/16198210.5935/0103-5053.20160043S0103-50532016000901636WOS:000384585800014S0103-50532016000901636.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal Of The Brazilian Chemical Society0,357info:eu-repo/semantics/openAccess2024-06-24T14:51:42Zoai:repositorio.unesp.br:11449/161982Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:39:25.045025Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods |
title |
New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods |
spellingShingle |
New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods Padilha, Elias C. [UNESP] type 2 diabetes PPAR pan agonist molecular modeling ADMET prediction |
title_short |
New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods |
title_full |
New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods |
title_fullStr |
New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods |
title_full_unstemmed |
New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods |
title_sort |
New PPAR alpha/gamma/delta Optimal Activator Rationally Designed by Computational Methods |
author |
Padilha, Elias C. [UNESP] |
author_facet |
Padilha, Elias C. [UNESP] Serafim, Rodolfo B. Sarmiento, Deisy Y. R. Santos, Cesar F. Santos, Cleydson B. R. Silva, Carlos H. T. P. |
author_role |
author |
author2 |
Serafim, Rodolfo B. Sarmiento, Deisy Y. R. Santos, Cesar F. Santos, Cleydson B. R. Silva, Carlos H. T. P. |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade de São Paulo (USP) Univ Fed Amapa |
dc.contributor.author.fl_str_mv |
Padilha, Elias C. [UNESP] Serafim, Rodolfo B. Sarmiento, Deisy Y. R. Santos, Cesar F. Santos, Cleydson B. R. Silva, Carlos H. T. P. |
dc.subject.por.fl_str_mv |
type 2 diabetes PPAR pan agonist molecular modeling ADMET prediction |
topic |
type 2 diabetes PPAR pan agonist molecular modeling ADMET prediction |
description |
The peroxisome proliferator-activated receptor gamma (PPAR gamma) is a nuclear receptor that acts as a transcription factor, regulating glucose, lipid and inflammation signaling and it is exploited in type 2 diabetes treatment. However, the selective activation of this PPAR subtype has been linked to important adverse effects which can be mitigated through concomitant activation of PPAR alpha and PPAR delta. In this study, we proposed new PPAR gamma agonists using PharmaGist Server for pharmacophore prediction, the molecular docking was performed by GOLD (genetic optimization for ligand docking) v2.2, AutoDock 4.2 and AutoDock Vina 1.1 and QikProp v4.0 and Derek for absorption, distribution, metabolism, excretion and toxicity (ADMET) assessment. One molecule showed high predicted affinity to PPAR gamma and favorable pharmacokinetic and toxicity properties. It was then evaluated against PPAR alpha and PPAR delta and showed greater affinity to these receptors than the controls. Therefore this molecule is a promising drug lead for the development of derivatives and for the treatment of metabolic syndrome with the benefits of a PPAR pan activation. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-09-01 2018-11-26T17:06:25Z 2018-11-26T17:06:25Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.5935/0103-5053.20160043 Journal Of The Brazilian Chemical Society. Sao Paulo: Soc Brasileira Quimica, v. 27, n. 9, p. 1636-1647, 2016. 0103-5053 http://hdl.handle.net/11449/161982 10.5935/0103-5053.20160043 S0103-50532016000901636 WOS:000384585800014 S0103-50532016000901636.pdf |
url |
http://dx.doi.org/10.5935/0103-5053.20160043 http://hdl.handle.net/11449/161982 |
identifier_str_mv |
Journal Of The Brazilian Chemical Society. Sao Paulo: Soc Brasileira Quimica, v. 27, n. 9, p. 1636-1647, 2016. 0103-5053 10.5935/0103-5053.20160043 S0103-50532016000901636 WOS:000384585800014 S0103-50532016000901636.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal Of The Brazilian Chemical Society 0,357 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1636-1647 application/pdf |
dc.publisher.none.fl_str_mv |
Soc Brasileira Quimica |
publisher.none.fl_str_mv |
Soc Brasileira Quimica |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128961832550400 |