Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models

Detalhes bibliográficos
Autor(a) principal: Hahn, Leandro
Data de Publicação: 2022
Outros Autores: Parent, Léon-Étienne, Paviani, Angela Cristina, Feltrim, Anderson Luiz, Wamser, Anderson Fernando, Rozane, Danilo Eduardo [UNESP], Ender, Marcos Matos, Grando, Douglas Luiz, Moura-Bueno, Jean Michel, Brunetto, Gustavo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1371/journal.pone.0268516
http://hdl.handle.net/11449/240992
Resumo: Brazil presents large yield gaps in garlic crops partly due to nutrient mismanagement at local scale. Machine learning (ML) provides powerful tools to handle numerous combinations of yield-impacting factors that help reducing the number of assumptions about nutrient management. The aim of the current study is to customize fertilizer recommendations to reach high garlic marketable yield at local scale in a pilot study. Thus, collected 15 nitrogen (N), 24 phosphorus (P), and 27 potassium (K) field experiments conducted during the 2015 to 2017 period in Santa Catarina state, Brazil. In addition, 61 growers’ observational data were collected in the same region in 2018 and 2019. The data set was split into 979 experimental and observational data for model calibration and into 45 experimental data (2016) to test ML models and compare the results to state recommendations. Random Forest (RF) was the most accurate ML to predict marketable yield after cropping system (cultivar, preceding crops), climatic indices, soil test and fertilization were included features as predictor (R2 = 0.886). Random Forest remained the most accurate ML model (R2 = 0.882) after excluding cultivar and climatic features from the prediction-making process. The model suggested the application of 200 kg N ha-1 to reach maximum marketable yield in a test site in comparison to the 300 kg N ha-1 set as state recommendation. P and K fertilization also seemed to be excessive, and it highlights the great potential to reduce production costs and environmental footprint without agronomic loss. Garlic root colonization by arbuscular mycorrhizal fungi likely contributed to P and K uptake. Well-documented data sets and machine learning models could support technology transfer, reduce costs with fertilizers and yield gaps, and sustain the Brazilian garlic production.
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spelling Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning modelsBrazil presents large yield gaps in garlic crops partly due to nutrient mismanagement at local scale. Machine learning (ML) provides powerful tools to handle numerous combinations of yield-impacting factors that help reducing the number of assumptions about nutrient management. The aim of the current study is to customize fertilizer recommendations to reach high garlic marketable yield at local scale in a pilot study. Thus, collected 15 nitrogen (N), 24 phosphorus (P), and 27 potassium (K) field experiments conducted during the 2015 to 2017 period in Santa Catarina state, Brazil. In addition, 61 growers’ observational data were collected in the same region in 2018 and 2019. The data set was split into 979 experimental and observational data for model calibration and into 45 experimental data (2016) to test ML models and compare the results to state recommendations. Random Forest (RF) was the most accurate ML to predict marketable yield after cropping system (cultivar, preceding crops), climatic indices, soil test and fertilization were included features as predictor (R2 = 0.886). Random Forest remained the most accurate ML model (R2 = 0.882) after excluding cultivar and climatic features from the prediction-making process. The model suggested the application of 200 kg N ha-1 to reach maximum marketable yield in a test site in comparison to the 300 kg N ha-1 set as state recommendation. P and K fertilization also seemed to be excessive, and it highlights the great potential to reduce production costs and environmental footprint without agronomic loss. Garlic root colonization by arbuscular mycorrhizal fungi likely contributed to P and K uptake. Well-documented data sets and machine learning models could support technology transfer, reduce costs with fertilizers and yield gaps, and sustain the Brazilian garlic production.Natural Sciences and Engineering Research Council of CanadaCaçador Experimental Station Agricultural Research and Rural Extension Agency of Santa Catarina (Epagri), CaçadorDepartment of Soils and Agrifood Engineering Laval UniversityDepartment of Soil Federal University of Santa Maria, Rio Grande do SulExecutive Secretariat for the Environment Government Administrative Center, Santa CatarinaState University of Paulista “Julio Mesquita Filho” Campus RegistroUniversity of Alto Vale do Rio do Peixe, CaçadorState University of Paulista “Julio Mesquita Filho” Campus RegistroNatural Sciences and Engineering Research Council of Canada: NSERC-2254Agricultural Research and Rural Extension Agency of Santa Catarina (Epagri)Laval UniversityFederal University of Santa MariaGovernment Administrative CenterUniversidade Estadual Paulista (UNESP)University of Alto Vale do Rio do PeixeHahn, LeandroParent, Léon-ÉtiennePaviani, Angela CristinaFeltrim, Anderson LuizWamser, Anderson FernandoRozane, Danilo Eduardo [UNESP]Ender, Marcos MatosGrando, Douglas LuizMoura-Bueno, Jean MichelBrunetto, Gustavo2023-03-01T20:42:12Z2023-03-01T20:42:12Z2022-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1371/journal.pone.0268516PLoS ONE, v. 17, n. 5 May, 2022.1932-6203http://hdl.handle.net/11449/24099210.1371/journal.pone.02685162-s2.0-85130100101Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPLoS ONEinfo:eu-repo/semantics/openAccess2024-05-03T13:20:53Zoai:repositorio.unesp.br:11449/240992Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-05-03T13:20:53Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
spellingShingle Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
Hahn, Leandro
title_short Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_full Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_fullStr Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_full_unstemmed Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_sort Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
author Hahn, Leandro
author_facet Hahn, Leandro
Parent, Léon-Étienne
Paviani, Angela Cristina
Feltrim, Anderson Luiz
Wamser, Anderson Fernando
Rozane, Danilo Eduardo [UNESP]
Ender, Marcos Matos
Grando, Douglas Luiz
Moura-Bueno, Jean Michel
Brunetto, Gustavo
author_role author
author2 Parent, Léon-Étienne
Paviani, Angela Cristina
Feltrim, Anderson Luiz
Wamser, Anderson Fernando
Rozane, Danilo Eduardo [UNESP]
Ender, Marcos Matos
Grando, Douglas Luiz
Moura-Bueno, Jean Michel
Brunetto, Gustavo
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Agricultural Research and Rural Extension Agency of Santa Catarina (Epagri)
Laval University
Federal University of Santa Maria
Government Administrative Center
Universidade Estadual Paulista (UNESP)
University of Alto Vale do Rio do Peixe
dc.contributor.author.fl_str_mv Hahn, Leandro
Parent, Léon-Étienne
Paviani, Angela Cristina
Feltrim, Anderson Luiz
Wamser, Anderson Fernando
Rozane, Danilo Eduardo [UNESP]
Ender, Marcos Matos
Grando, Douglas Luiz
Moura-Bueno, Jean Michel
Brunetto, Gustavo
description Brazil presents large yield gaps in garlic crops partly due to nutrient mismanagement at local scale. Machine learning (ML) provides powerful tools to handle numerous combinations of yield-impacting factors that help reducing the number of assumptions about nutrient management. The aim of the current study is to customize fertilizer recommendations to reach high garlic marketable yield at local scale in a pilot study. Thus, collected 15 nitrogen (N), 24 phosphorus (P), and 27 potassium (K) field experiments conducted during the 2015 to 2017 period in Santa Catarina state, Brazil. In addition, 61 growers’ observational data were collected in the same region in 2018 and 2019. The data set was split into 979 experimental and observational data for model calibration and into 45 experimental data (2016) to test ML models and compare the results to state recommendations. Random Forest (RF) was the most accurate ML to predict marketable yield after cropping system (cultivar, preceding crops), climatic indices, soil test and fertilization were included features as predictor (R2 = 0.886). Random Forest remained the most accurate ML model (R2 = 0.882) after excluding cultivar and climatic features from the prediction-making process. The model suggested the application of 200 kg N ha-1 to reach maximum marketable yield in a test site in comparison to the 300 kg N ha-1 set as state recommendation. P and K fertilization also seemed to be excessive, and it highlights the great potential to reduce production costs and environmental footprint without agronomic loss. Garlic root colonization by arbuscular mycorrhizal fungi likely contributed to P and K uptake. Well-documented data sets and machine learning models could support technology transfer, reduce costs with fertilizers and yield gaps, and sustain the Brazilian garlic production.
publishDate 2022
dc.date.none.fl_str_mv 2022-05-01
2023-03-01T20:42:12Z
2023-03-01T20:42:12Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1371/journal.pone.0268516
PLoS ONE, v. 17, n. 5 May, 2022.
1932-6203
http://hdl.handle.net/11449/240992
10.1371/journal.pone.0268516
2-s2.0-85130100101
url http://dx.doi.org/10.1371/journal.pone.0268516
http://hdl.handle.net/11449/240992
identifier_str_mv PLoS ONE, v. 17, n. 5 May, 2022.
1932-6203
10.1371/journal.pone.0268516
2-s2.0-85130100101
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv PLoS ONE
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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