Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)

Detalhes bibliográficos
Autor(a) principal: Mondelli, A. L. [UNESP]
Data de Publicação: 2012
Outros Autores: Niero-Melo, L., Bagagli, Eduardo [UNESP], Camargo, C. H. [UNESP], Bruder-Nascimento, A. [UNESP], Sugizaki, M. F. [UNESP], Carneiro, M., Villas Boas, P. J. F.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/S1678-91992012000300011
http://hdl.handle.net/11449/11365
Resumo: Yeasts are becoming a common cause of nosocomial fungal infections that affect immunocompromised patients. Such infections can evolve into sepsis, whose mortality rate is high. This study aimed to evaluate the viability of Candida species identification by the automated system Vitek-Biomerieux (Durham, USA). Ninety-eight medical charts referencing the Candida spp. samples available for the study were retrospectively analyzed. The system Vitek-Biomerieux with Candida identification card is recommended for laboratory routine use and presents 80.6% agreement with the reference method. By separate analysis of species, 13.5% of C. parapsilosis samples differed from the reference method, while the Vitek system wrongly identified them as C. tropicalis, C. lusitaneae or as Candida albicans. C. glabrata presented a discrepancy of only one sample (25%), and was identified by Vitek as C. parapsilosis. C. guilliermondii also differed in only one sample (33.3%), being identified as Candida spp. All C. albicans, C. tropicalis and C. lusitaneae samples were identified correctly.
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spelling Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)candidemiaCandida spp.identificationautomated identificationYeasts are becoming a common cause of nosocomial fungal infections that affect immunocompromised patients. Such infections can evolve into sepsis, whose mortality rate is high. This study aimed to evaluate the viability of Candida species identification by the automated system Vitek-Biomerieux (Durham, USA). Ninety-eight medical charts referencing the Candida spp. samples available for the study were retrospectively analyzed. The system Vitek-Biomerieux with Candida identification card is recommended for laboratory routine use and presents 80.6% agreement with the reference method. By separate analysis of species, 13.5% of C. parapsilosis samples differed from the reference method, while the Vitek system wrongly identified them as C. tropicalis, C. lusitaneae or as Candida albicans. C. glabrata presented a discrepancy of only one sample (25%), and was identified by Vitek as C. parapsilosis. C. guilliermondii also differed in only one sample (33.3%), being identified as Candida spp. All C. albicans, C. tropicalis and C. lusitaneae samples were identified correctly.Fundação para o Desenvolvimento Médico e Hospitalar (Famesp)Clinical Hospital and Clinical Analysis Laboratory of Botucatu Medical SchoolDepartment of Microbiology and Immunology of the Botucatu Biosciences Institute, UNESP, Botucatu, SPUniv Estadual Paulista, São Paulo State Univ, Dept Med Interna, Fac Med Botucatu,Botucatu Med Sch,UNESP, BR-18618970 Botucatu, SP, BrazilUniv Estadual Paulista, São Paulo State Univ, Dept Microbiol & Immunol, Botucatu Biosci Inst,UNESP, BR-18618970 Botucatu, SP, BrazilUniv Estadual Paulista, São Paulo State Univ, Dept Med Interna, Fac Med Botucatu,Botucatu Med Sch,UNESP, BR-18618970 Botucatu, SP, BrazilUniv Estadual Paulista, São Paulo State Univ, Dept Microbiol & Immunol, Botucatu Biosci Inst,UNESP, BR-18618970 Botucatu, SP, BrazilUniversidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP)Universidade Estadual Paulista (Unesp)Mondelli, A. L. [UNESP]Niero-Melo, L.Bagagli, Eduardo [UNESP]Camargo, C. H. [UNESP]Bruder-Nascimento, A. [UNESP]Sugizaki, M. F. [UNESP]Carneiro, M.Villas Boas, P. J. F.2014-05-20T13:33:15Z2014-05-20T13:33:15Z2012-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article335-339application/pdfhttp://dx.doi.org/10.1590/S1678-91992012000300011Journal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 18, n. 3, p. 335-339, 2012.1678-9199http://hdl.handle.net/11449/11365S1678-91992012000300011WOS:000308950400011S1678-91992012000300011.pdf33203275704295390000-0002-8003-4109Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Venomous Animals and Toxins Including Tropical Diseases1.7820,573info:eu-repo/semantics/openAccess2023-12-21T06:21:24Zoai:repositorio.unesp.br:11449/11365Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:54:57.024868Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)
title Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)
spellingShingle Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)
Mondelli, A. L. [UNESP]
candidemia
Candida spp.
identification
automated identification
title_short Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)
title_full Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)
title_fullStr Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)
title_full_unstemmed Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)
title_sort Candida spp.: manual identification (reference method) and automated identification (Vitek system platform)
author Mondelli, A. L. [UNESP]
author_facet Mondelli, A. L. [UNESP]
Niero-Melo, L.
Bagagli, Eduardo [UNESP]
Camargo, C. H. [UNESP]
Bruder-Nascimento, A. [UNESP]
Sugizaki, M. F. [UNESP]
Carneiro, M.
Villas Boas, P. J. F.
author_role author
author2 Niero-Melo, L.
Bagagli, Eduardo [UNESP]
Camargo, C. H. [UNESP]
Bruder-Nascimento, A. [UNESP]
Sugizaki, M. F. [UNESP]
Carneiro, M.
Villas Boas, P. J. F.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Mondelli, A. L. [UNESP]
Niero-Melo, L.
Bagagli, Eduardo [UNESP]
Camargo, C. H. [UNESP]
Bruder-Nascimento, A. [UNESP]
Sugizaki, M. F. [UNESP]
Carneiro, M.
Villas Boas, P. J. F.
dc.subject.por.fl_str_mv candidemia
Candida spp.
identification
automated identification
topic candidemia
Candida spp.
identification
automated identification
description Yeasts are becoming a common cause of nosocomial fungal infections that affect immunocompromised patients. Such infections can evolve into sepsis, whose mortality rate is high. This study aimed to evaluate the viability of Candida species identification by the automated system Vitek-Biomerieux (Durham, USA). Ninety-eight medical charts referencing the Candida spp. samples available for the study were retrospectively analyzed. The system Vitek-Biomerieux with Candida identification card is recommended for laboratory routine use and presents 80.6% agreement with the reference method. By separate analysis of species, 13.5% of C. parapsilosis samples differed from the reference method, while the Vitek system wrongly identified them as C. tropicalis, C. lusitaneae or as Candida albicans. C. glabrata presented a discrepancy of only one sample (25%), and was identified by Vitek as C. parapsilosis. C. guilliermondii also differed in only one sample (33.3%), being identified as Candida spp. All C. albicans, C. tropicalis and C. lusitaneae samples were identified correctly.
publishDate 2012
dc.date.none.fl_str_mv 2012-01-01
2014-05-20T13:33:15Z
2014-05-20T13:33:15Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S1678-91992012000300011
Journal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 18, n. 3, p. 335-339, 2012.
1678-9199
http://hdl.handle.net/11449/11365
S1678-91992012000300011
WOS:000308950400011
S1678-91992012000300011.pdf
3320327570429539
0000-0002-8003-4109
url http://dx.doi.org/10.1590/S1678-91992012000300011
http://hdl.handle.net/11449/11365
identifier_str_mv Journal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 18, n. 3, p. 335-339, 2012.
1678-9199
S1678-91992012000300011
WOS:000308950400011
S1678-91992012000300011.pdf
3320327570429539
0000-0002-8003-4109
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Venomous Animals and Toxins Including Tropical Diseases
1.782
0,573
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 335-339
application/pdf
dc.publisher.none.fl_str_mv Universidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP)
publisher.none.fl_str_mv Universidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP)
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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