Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference

Detalhes bibliográficos
Autor(a) principal: Traldi, Josiane Baccarin
Data de Publicação: 2020
Outros Autores: Vicari, Marcelo Ricardo, Martinez, Juliana de Fatima, Blanco, Daniel Rodrigues, Lui, Roberto Laridondo, Azambuja, Matheus, Almeida, Rafael Bonfim de, Malimpensa, Geovana de Cassia, Silva, Guilherme Jose da Costa [UNESP], Oliveira, Claudio [UNESP], Pavanelli, Carla Simone, Moreira Filho, Orlando
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.jcz.2020.10.010
http://hdl.handle.net/11449/209766
Resumo: This paper presents results from a comparative analysis of cytogenetic markers, DNA barcode, molecular delimitation and population genetics among four groups of Apareiodon samples inhabiting four headwater streams feeding the Tocantins River in Brazil's Tocantins River Basin. Apareiodon is a genus of Parodontidae, a Neotropical fish family whose members show often-subtle morphological diagnostic characters that complicate identification of its constituent species. The samples were previously morphologically identified as Apareiodon machrisi, Apareiodon cavalcante, Apareiodon sp. 1, and Apareiodon sp. 2. The cytogenetic results showed a shared diploid number of 54 chromosomes, and no heteromorphic sex chromosomes were detected. In situ localization of repetitive DNA sequences (18S and 5S ribosomal DNAs, (GATA)(n) sequence, pPh2004 satellite DNA, and WAp repetitive fraction) revealed karyotype differences among the four groups of samples. The K2P genetic distance among the groups ranged from 0.79 to 4.27%. Species delimitation analyses diverge in taxa number: general mixed Yulecoalescent data suggested the occurrence of three species; and the Bayesian and neighbor-joining trees revealed four clades, three of them being supported clades (A. machrisi thorn Apareiodon sp. 1, A. cavalcante, and Apareiodon sp. 2). Haplotypes did not overlap and high Fst values were observed among the groups. The data suggest that these samples have had a recent parapatric divergence: A. cavalcante and A. machrisi are valid species; Apareiodon sp. 1 may be a lineage related to A. machrisi, possibly undergoing an incipient process of speciation; and Apareiodon sp. 2 may be a new Apareiodon molecular operational taxonomic unit. (c) 2020 Elsevier GmbH. All rights reserved.
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spelling Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inferenceChromosome differentiationDNA barcodeHidden diversityPopulation geneticsSpeciationThis paper presents results from a comparative analysis of cytogenetic markers, DNA barcode, molecular delimitation and population genetics among four groups of Apareiodon samples inhabiting four headwater streams feeding the Tocantins River in Brazil's Tocantins River Basin. Apareiodon is a genus of Parodontidae, a Neotropical fish family whose members show often-subtle morphological diagnostic characters that complicate identification of its constituent species. The samples were previously morphologically identified as Apareiodon machrisi, Apareiodon cavalcante, Apareiodon sp. 1, and Apareiodon sp. 2. The cytogenetic results showed a shared diploid number of 54 chromosomes, and no heteromorphic sex chromosomes were detected. In situ localization of repetitive DNA sequences (18S and 5S ribosomal DNAs, (GATA)(n) sequence, pPh2004 satellite DNA, and WAp repetitive fraction) revealed karyotype differences among the four groups of samples. The K2P genetic distance among the groups ranged from 0.79 to 4.27%. Species delimitation analyses diverge in taxa number: general mixed Yulecoalescent data suggested the occurrence of three species; and the Bayesian and neighbor-joining trees revealed four clades, three of them being supported clades (A. machrisi thorn Apareiodon sp. 1, A. cavalcante, and Apareiodon sp. 2). Haplotypes did not overlap and high Fst values were observed among the groups. The data suggest that these samples have had a recent parapatric divergence: A. cavalcante and A. machrisi are valid species; Apareiodon sp. 1 may be a lineage related to A. machrisi, possibly undergoing an incipient process of speciation; and Apareiodon sp. 2 may be a new Apareiodon molecular operational taxonomic unit. (c) 2020 Elsevier GmbH. All rights reserved.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundacao Araucaria (Fundacao Araucaria de Apoio ao Desenvolvimento Cientifico e Tecnologico do Estado do Parana), BrazilConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Fed Amazonas, Dept Genet, Ave Gen Rodrigo Octavio,6200, BR-69080900 Manaus, Amazonas, BrazilUniv Fed Parana, Ctr Politecn, Programa Posgrad Genet, Jardim Amer,Caixa Postal,19071, BR-81531990 Curitiba, Parana, BrazilUniv Fed Sao Carlos, Dept Genet & Evolucao, Rodovia Washington Luis Km 235, BR-13565905 Sao Carlos, SP, BrazilUniv Tecnol Fed Parana, Campus Santa Helena, BR-85892000 Santa Helena, PR, BrazilUniv Estadual Oeste Parana, Ctr Ciencias Biol & Saude, Rua Univ,2069, BR-85819110 Cascavel, PR, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Morfol, Distrito Rubiao Jr,S-N, BR-18618970 Botucatu, SP, BrazilUniv Estadual Maringa, Nucleo Pesquisas Ictiol & Aquicultura, Ave Colombo,5790, BR-87020900 Maringa, PR, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Morfol, Distrito Rubiao Jr,S-N, BR-18618970 Botucatu, SP, BrazilElsevier B.V.Univ Fed AmazonasUniv Fed ParanaUniversidade Federal de São Carlos (UFSCar)Univ Tecnol Fed ParanaUniv Estadual Oeste ParanaUniversidade Estadual Paulista (Unesp)Universidade Estadual de Maringá (UEM)Traldi, Josiane BaccarinVicari, Marcelo RicardoMartinez, Juliana de FatimaBlanco, Daniel RodriguesLui, Roberto LaridondoAzambuja, MatheusAlmeida, Rafael Bonfim deMalimpensa, Geovana de CassiaSilva, Guilherme Jose da Costa [UNESP]Oliveira, Claudio [UNESP]Pavanelli, Carla SimoneMoreira Filho, Orlando2021-06-25T12:28:34Z2021-06-25T12:28:34Z2020-11-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article166-176http://dx.doi.org/10.1016/j.jcz.2020.10.010Zoologischer Anzeiger. Munich: Elsevier Gmbh, v. 289, p. 166-176, 2020.0044-5231http://hdl.handle.net/11449/20976610.1016/j.jcz.2020.10.010WOS:000598342400005Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengZoologischer Anzeigerinfo:eu-repo/semantics/openAccess2021-10-23T19:49:59Zoai:repositorio.unesp.br:11449/209766Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:59:22.614434Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
title Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
spellingShingle Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
Traldi, Josiane Baccarin
Chromosome differentiation
DNA barcode
Hidden diversity
Population genetics
Speciation
title_short Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
title_full Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
title_fullStr Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
title_full_unstemmed Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
title_sort Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
author Traldi, Josiane Baccarin
author_facet Traldi, Josiane Baccarin
Vicari, Marcelo Ricardo
Martinez, Juliana de Fatima
Blanco, Daniel Rodrigues
Lui, Roberto Laridondo
Azambuja, Matheus
Almeida, Rafael Bonfim de
Malimpensa, Geovana de Cassia
Silva, Guilherme Jose da Costa [UNESP]
Oliveira, Claudio [UNESP]
Pavanelli, Carla Simone
Moreira Filho, Orlando
author_role author
author2 Vicari, Marcelo Ricardo
Martinez, Juliana de Fatima
Blanco, Daniel Rodrigues
Lui, Roberto Laridondo
Azambuja, Matheus
Almeida, Rafael Bonfim de
Malimpensa, Geovana de Cassia
Silva, Guilherme Jose da Costa [UNESP]
Oliveira, Claudio [UNESP]
Pavanelli, Carla Simone
Moreira Filho, Orlando
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Univ Fed Amazonas
Univ Fed Parana
Universidade Federal de São Carlos (UFSCar)
Univ Tecnol Fed Parana
Univ Estadual Oeste Parana
Universidade Estadual Paulista (Unesp)
Universidade Estadual de Maringá (UEM)
dc.contributor.author.fl_str_mv Traldi, Josiane Baccarin
Vicari, Marcelo Ricardo
Martinez, Juliana de Fatima
Blanco, Daniel Rodrigues
Lui, Roberto Laridondo
Azambuja, Matheus
Almeida, Rafael Bonfim de
Malimpensa, Geovana de Cassia
Silva, Guilherme Jose da Costa [UNESP]
Oliveira, Claudio [UNESP]
Pavanelli, Carla Simone
Moreira Filho, Orlando
dc.subject.por.fl_str_mv Chromosome differentiation
DNA barcode
Hidden diversity
Population genetics
Speciation
topic Chromosome differentiation
DNA barcode
Hidden diversity
Population genetics
Speciation
description This paper presents results from a comparative analysis of cytogenetic markers, DNA barcode, molecular delimitation and population genetics among four groups of Apareiodon samples inhabiting four headwater streams feeding the Tocantins River in Brazil's Tocantins River Basin. Apareiodon is a genus of Parodontidae, a Neotropical fish family whose members show often-subtle morphological diagnostic characters that complicate identification of its constituent species. The samples were previously morphologically identified as Apareiodon machrisi, Apareiodon cavalcante, Apareiodon sp. 1, and Apareiodon sp. 2. The cytogenetic results showed a shared diploid number of 54 chromosomes, and no heteromorphic sex chromosomes were detected. In situ localization of repetitive DNA sequences (18S and 5S ribosomal DNAs, (GATA)(n) sequence, pPh2004 satellite DNA, and WAp repetitive fraction) revealed karyotype differences among the four groups of samples. The K2P genetic distance among the groups ranged from 0.79 to 4.27%. Species delimitation analyses diverge in taxa number: general mixed Yulecoalescent data suggested the occurrence of three species; and the Bayesian and neighbor-joining trees revealed four clades, three of them being supported clades (A. machrisi thorn Apareiodon sp. 1, A. cavalcante, and Apareiodon sp. 2). Haplotypes did not overlap and high Fst values were observed among the groups. The data suggest that these samples have had a recent parapatric divergence: A. cavalcante and A. machrisi are valid species; Apareiodon sp. 1 may be a lineage related to A. machrisi, possibly undergoing an incipient process of speciation; and Apareiodon sp. 2 may be a new Apareiodon molecular operational taxonomic unit. (c) 2020 Elsevier GmbH. All rights reserved.
publishDate 2020
dc.date.none.fl_str_mv 2020-11-01
2021-06-25T12:28:34Z
2021-06-25T12:28:34Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.jcz.2020.10.010
Zoologischer Anzeiger. Munich: Elsevier Gmbh, v. 289, p. 166-176, 2020.
0044-5231
http://hdl.handle.net/11449/209766
10.1016/j.jcz.2020.10.010
WOS:000598342400005
url http://dx.doi.org/10.1016/j.jcz.2020.10.010
http://hdl.handle.net/11449/209766
identifier_str_mv Zoologischer Anzeiger. Munich: Elsevier Gmbh, v. 289, p. 166-176, 2020.
0044-5231
10.1016/j.jcz.2020.10.010
WOS:000598342400005
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Zoologischer Anzeiger
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 166-176
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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