Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.jcz.2020.10.010 http://hdl.handle.net/11449/209766 |
Resumo: | This paper presents results from a comparative analysis of cytogenetic markers, DNA barcode, molecular delimitation and population genetics among four groups of Apareiodon samples inhabiting four headwater streams feeding the Tocantins River in Brazil's Tocantins River Basin. Apareiodon is a genus of Parodontidae, a Neotropical fish family whose members show often-subtle morphological diagnostic characters that complicate identification of its constituent species. The samples were previously morphologically identified as Apareiodon machrisi, Apareiodon cavalcante, Apareiodon sp. 1, and Apareiodon sp. 2. The cytogenetic results showed a shared diploid number of 54 chromosomes, and no heteromorphic sex chromosomes were detected. In situ localization of repetitive DNA sequences (18S and 5S ribosomal DNAs, (GATA)(n) sequence, pPh2004 satellite DNA, and WAp repetitive fraction) revealed karyotype differences among the four groups of samples. The K2P genetic distance among the groups ranged from 0.79 to 4.27%. Species delimitation analyses diverge in taxa number: general mixed Yulecoalescent data suggested the occurrence of three species; and the Bayesian and neighbor-joining trees revealed four clades, three of them being supported clades (A. machrisi thorn Apareiodon sp. 1, A. cavalcante, and Apareiodon sp. 2). Haplotypes did not overlap and high Fst values were observed among the groups. The data suggest that these samples have had a recent parapatric divergence: A. cavalcante and A. machrisi are valid species; Apareiodon sp. 1 may be a lineage related to A. machrisi, possibly undergoing an incipient process of speciation; and Apareiodon sp. 2 may be a new Apareiodon molecular operational taxonomic unit. (c) 2020 Elsevier GmbH. All rights reserved. |
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Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inferenceChromosome differentiationDNA barcodeHidden diversityPopulation geneticsSpeciationThis paper presents results from a comparative analysis of cytogenetic markers, DNA barcode, molecular delimitation and population genetics among four groups of Apareiodon samples inhabiting four headwater streams feeding the Tocantins River in Brazil's Tocantins River Basin. Apareiodon is a genus of Parodontidae, a Neotropical fish family whose members show often-subtle morphological diagnostic characters that complicate identification of its constituent species. The samples were previously morphologically identified as Apareiodon machrisi, Apareiodon cavalcante, Apareiodon sp. 1, and Apareiodon sp. 2. The cytogenetic results showed a shared diploid number of 54 chromosomes, and no heteromorphic sex chromosomes were detected. In situ localization of repetitive DNA sequences (18S and 5S ribosomal DNAs, (GATA)(n) sequence, pPh2004 satellite DNA, and WAp repetitive fraction) revealed karyotype differences among the four groups of samples. The K2P genetic distance among the groups ranged from 0.79 to 4.27%. Species delimitation analyses diverge in taxa number: general mixed Yulecoalescent data suggested the occurrence of three species; and the Bayesian and neighbor-joining trees revealed four clades, three of them being supported clades (A. machrisi thorn Apareiodon sp. 1, A. cavalcante, and Apareiodon sp. 2). Haplotypes did not overlap and high Fst values were observed among the groups. The data suggest that these samples have had a recent parapatric divergence: A. cavalcante and A. machrisi are valid species; Apareiodon sp. 1 may be a lineage related to A. machrisi, possibly undergoing an incipient process of speciation; and Apareiodon sp. 2 may be a new Apareiodon molecular operational taxonomic unit. (c) 2020 Elsevier GmbH. All rights reserved.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundacao Araucaria (Fundacao Araucaria de Apoio ao Desenvolvimento Cientifico e Tecnologico do Estado do Parana), BrazilConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Fed Amazonas, Dept Genet, Ave Gen Rodrigo Octavio,6200, BR-69080900 Manaus, Amazonas, BrazilUniv Fed Parana, Ctr Politecn, Programa Posgrad Genet, Jardim Amer,Caixa Postal,19071, BR-81531990 Curitiba, Parana, BrazilUniv Fed Sao Carlos, Dept Genet & Evolucao, Rodovia Washington Luis Km 235, BR-13565905 Sao Carlos, SP, BrazilUniv Tecnol Fed Parana, Campus Santa Helena, BR-85892000 Santa Helena, PR, BrazilUniv Estadual Oeste Parana, Ctr Ciencias Biol & Saude, Rua Univ,2069, BR-85819110 Cascavel, PR, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Morfol, Distrito Rubiao Jr,S-N, BR-18618970 Botucatu, SP, BrazilUniv Estadual Maringa, Nucleo Pesquisas Ictiol & Aquicultura, Ave Colombo,5790, BR-87020900 Maringa, PR, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Morfol, Distrito Rubiao Jr,S-N, BR-18618970 Botucatu, SP, BrazilElsevier B.V.Univ Fed AmazonasUniv Fed ParanaUniversidade Federal de São Carlos (UFSCar)Univ Tecnol Fed ParanaUniv Estadual Oeste ParanaUniversidade Estadual Paulista (Unesp)Universidade Estadual de Maringá (UEM)Traldi, Josiane BaccarinVicari, Marcelo RicardoMartinez, Juliana de FatimaBlanco, Daniel RodriguesLui, Roberto LaridondoAzambuja, MatheusAlmeida, Rafael Bonfim deMalimpensa, Geovana de CassiaSilva, Guilherme Jose da Costa [UNESP]Oliveira, Claudio [UNESP]Pavanelli, Carla SimoneMoreira Filho, Orlando2021-06-25T12:28:34Z2021-06-25T12:28:34Z2020-11-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article166-176http://dx.doi.org/10.1016/j.jcz.2020.10.010Zoologischer Anzeiger. Munich: Elsevier Gmbh, v. 289, p. 166-176, 2020.0044-5231http://hdl.handle.net/11449/20976610.1016/j.jcz.2020.10.010WOS:000598342400005Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengZoologischer Anzeigerinfo:eu-repo/semantics/openAccess2021-10-23T19:49:59Zoai:repositorio.unesp.br:11449/209766Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:59:22.614434Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference |
title |
Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference |
spellingShingle |
Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference Traldi, Josiane Baccarin Chromosome differentiation DNA barcode Hidden diversity Population genetics Speciation |
title_short |
Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference |
title_full |
Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference |
title_fullStr |
Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference |
title_full_unstemmed |
Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference |
title_sort |
Recent Apareiodon species evolutionary divergence (Characiformes: Parodontidae) evidenced by chromosomal and molecular inference |
author |
Traldi, Josiane Baccarin |
author_facet |
Traldi, Josiane Baccarin Vicari, Marcelo Ricardo Martinez, Juliana de Fatima Blanco, Daniel Rodrigues Lui, Roberto Laridondo Azambuja, Matheus Almeida, Rafael Bonfim de Malimpensa, Geovana de Cassia Silva, Guilherme Jose da Costa [UNESP] Oliveira, Claudio [UNESP] Pavanelli, Carla Simone Moreira Filho, Orlando |
author_role |
author |
author2 |
Vicari, Marcelo Ricardo Martinez, Juliana de Fatima Blanco, Daniel Rodrigues Lui, Roberto Laridondo Azambuja, Matheus Almeida, Rafael Bonfim de Malimpensa, Geovana de Cassia Silva, Guilherme Jose da Costa [UNESP] Oliveira, Claudio [UNESP] Pavanelli, Carla Simone Moreira Filho, Orlando |
author2_role |
author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Univ Fed Amazonas Univ Fed Parana Universidade Federal de São Carlos (UFSCar) Univ Tecnol Fed Parana Univ Estadual Oeste Parana Universidade Estadual Paulista (Unesp) Universidade Estadual de Maringá (UEM) |
dc.contributor.author.fl_str_mv |
Traldi, Josiane Baccarin Vicari, Marcelo Ricardo Martinez, Juliana de Fatima Blanco, Daniel Rodrigues Lui, Roberto Laridondo Azambuja, Matheus Almeida, Rafael Bonfim de Malimpensa, Geovana de Cassia Silva, Guilherme Jose da Costa [UNESP] Oliveira, Claudio [UNESP] Pavanelli, Carla Simone Moreira Filho, Orlando |
dc.subject.por.fl_str_mv |
Chromosome differentiation DNA barcode Hidden diversity Population genetics Speciation |
topic |
Chromosome differentiation DNA barcode Hidden diversity Population genetics Speciation |
description |
This paper presents results from a comparative analysis of cytogenetic markers, DNA barcode, molecular delimitation and population genetics among four groups of Apareiodon samples inhabiting four headwater streams feeding the Tocantins River in Brazil's Tocantins River Basin. Apareiodon is a genus of Parodontidae, a Neotropical fish family whose members show often-subtle morphological diagnostic characters that complicate identification of its constituent species. The samples were previously morphologically identified as Apareiodon machrisi, Apareiodon cavalcante, Apareiodon sp. 1, and Apareiodon sp. 2. The cytogenetic results showed a shared diploid number of 54 chromosomes, and no heteromorphic sex chromosomes were detected. In situ localization of repetitive DNA sequences (18S and 5S ribosomal DNAs, (GATA)(n) sequence, pPh2004 satellite DNA, and WAp repetitive fraction) revealed karyotype differences among the four groups of samples. The K2P genetic distance among the groups ranged from 0.79 to 4.27%. Species delimitation analyses diverge in taxa number: general mixed Yulecoalescent data suggested the occurrence of three species; and the Bayesian and neighbor-joining trees revealed four clades, three of them being supported clades (A. machrisi thorn Apareiodon sp. 1, A. cavalcante, and Apareiodon sp. 2). Haplotypes did not overlap and high Fst values were observed among the groups. The data suggest that these samples have had a recent parapatric divergence: A. cavalcante and A. machrisi are valid species; Apareiodon sp. 1 may be a lineage related to A. machrisi, possibly undergoing an incipient process of speciation; and Apareiodon sp. 2 may be a new Apareiodon molecular operational taxonomic unit. (c) 2020 Elsevier GmbH. All rights reserved. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-11-01 2021-06-25T12:28:34Z 2021-06-25T12:28:34Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.jcz.2020.10.010 Zoologischer Anzeiger. Munich: Elsevier Gmbh, v. 289, p. 166-176, 2020. 0044-5231 http://hdl.handle.net/11449/209766 10.1016/j.jcz.2020.10.010 WOS:000598342400005 |
url |
http://dx.doi.org/10.1016/j.jcz.2020.10.010 http://hdl.handle.net/11449/209766 |
identifier_str_mv |
Zoologischer Anzeiger. Munich: Elsevier Gmbh, v. 289, p. 166-176, 2020. 0044-5231 10.1016/j.jcz.2020.10.010 WOS:000598342400005 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Zoologischer Anzeiger |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
166-176 |
dc.publisher.none.fl_str_mv |
Elsevier B.V. |
publisher.none.fl_str_mv |
Elsevier B.V. |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129146780385280 |