Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene

Detalhes bibliográficos
Autor(a) principal: Teodoro, S. S A [UNESP]
Data de Publicação: 2015
Outros Autores: Terossi, M., Costa, R. C. [UNESP], Mantelatto, F. L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.ecss.2015.07.009
http://hdl.handle.net/11449/172263
Resumo: The pink shrimp Farfantepenaeus paulensis is one of the most commercially exploited species in Brazil's South and Southeastern regions. Specific information about the status of its genetic variation is necessary to promote more effective management procedures. The genetic variation of the population of F. paulensis was investigated in five localities along southern and southeastern coast of Brazil. Sampling was performed with a commercial fishing boat. Total genomic DNA was extracted from abdominal muscle tissues and was used to DNA amplification by PCR. The COI gene was used as a DNA barcoding marker. The 570 bp COI gene sequences were obtained from all 45 individuals. The haplotype network showed no genetic variability among the population stocks, which was confirmed by Molecular Variance Analysis. The final alignment showed that inside species there is haplotype sharing among the sampled localities, since one haplotype is shared by 38 individuals belonging to all the five sampled regions, with no biogeographic pattern. This result is reasonable since there are no geographical barriers or habitat disjunction that might serve as a barrier to gene flow among the sampled localities. Possible reasons and consequences of the genetic homogeneity found are discussed. The results complement ecological studies concerning the offseason: since it is a single stock, the same protection strategy can be applied. However, the genetic homogeneity found in this study combined with the intensive fishery effort and the species biology can result in severe consequences for the F. paulensis.
id UNSP_f80c5c7cd13ed29d915b47726c3b3f65
oai_identifier_str oai:repositorio.unesp.br:11449/172263
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding geneCytochrome oxidase IFishery stocksGene flowGenetic homogeneityPenaeidaeThe pink shrimp Farfantepenaeus paulensis is one of the most commercially exploited species in Brazil's South and Southeastern regions. Specific information about the status of its genetic variation is necessary to promote more effective management procedures. The genetic variation of the population of F. paulensis was investigated in five localities along southern and southeastern coast of Brazil. Sampling was performed with a commercial fishing boat. Total genomic DNA was extracted from abdominal muscle tissues and was used to DNA amplification by PCR. The COI gene was used as a DNA barcoding marker. The 570 bp COI gene sequences were obtained from all 45 individuals. The haplotype network showed no genetic variability among the population stocks, which was confirmed by Molecular Variance Analysis. The final alignment showed that inside species there is haplotype sharing among the sampled localities, since one haplotype is shared by 38 individuals belonging to all the five sampled regions, with no biogeographic pattern. This result is reasonable since there are no geographical barriers or habitat disjunction that might serve as a barrier to gene flow among the sampled localities. Possible reasons and consequences of the genetic homogeneity found are discussed. The results complement ecological studies concerning the offseason: since it is a single stock, the same protection strategy can be applied. However, the genetic homogeneity found in this study combined with the intensive fishery effort and the species biology can result in severe consequences for the F. paulensis.Laboratory of Biology of Marine and Freshwater Shrimp (LABCAM) Department of Biological Sciences Faculty of Sciences University of State of São Paulo (UNESP), Av. Eng. Luiz Edmundo Corrijo CoubeLaboratory of Bioecology and Crustacean Systematics (LBSC) Department of Biology Faculty of Philosophy Science and Letters at Ribeirão Preto (FFCLRP) University of São Paulo (USP)Laboratory of Biology of Marine and Freshwater Shrimp (LABCAM) Department of Biological Sciences Faculty of Sciences University of State of São Paulo (UNESP), Av. Eng. Luiz Edmundo Corrijo CoubeUniversidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)Teodoro, S. S A [UNESP]Terossi, M.Costa, R. C. [UNESP]Mantelatto, F. L.2018-12-11T16:59:25Z2018-12-11T16:59:25Z2015-12-05info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article124-130application/pdfhttp://dx.doi.org/10.1016/j.ecss.2015.07.009Estuarine, Coastal and Shelf Science, v. 166, p. 124-130.0272-7714http://hdl.handle.net/11449/17226310.1016/j.ecss.2015.07.0092-s2.0-849492178622-s2.0-84949217862.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengEstuarine, Coastal and Shelf Science1,059info:eu-repo/semantics/openAccess2023-11-21T06:08:19Zoai:repositorio.unesp.br:11449/172263Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:17:04.124384Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
title Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
spellingShingle Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
Teodoro, S. S A [UNESP]
Cytochrome oxidase I
Fishery stocks
Gene flow
Genetic homogeneity
Penaeidae
title_short Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
title_full Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
title_fullStr Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
title_full_unstemmed Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
title_sort Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
author Teodoro, S. S A [UNESP]
author_facet Teodoro, S. S A [UNESP]
Terossi, M.
Costa, R. C. [UNESP]
Mantelatto, F. L.
author_role author
author2 Terossi, M.
Costa, R. C. [UNESP]
Mantelatto, F. L.
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade de São Paulo (USP)
dc.contributor.author.fl_str_mv Teodoro, S. S A [UNESP]
Terossi, M.
Costa, R. C. [UNESP]
Mantelatto, F. L.
dc.subject.por.fl_str_mv Cytochrome oxidase I
Fishery stocks
Gene flow
Genetic homogeneity
Penaeidae
topic Cytochrome oxidase I
Fishery stocks
Gene flow
Genetic homogeneity
Penaeidae
description The pink shrimp Farfantepenaeus paulensis is one of the most commercially exploited species in Brazil's South and Southeastern regions. Specific information about the status of its genetic variation is necessary to promote more effective management procedures. The genetic variation of the population of F. paulensis was investigated in five localities along southern and southeastern coast of Brazil. Sampling was performed with a commercial fishing boat. Total genomic DNA was extracted from abdominal muscle tissues and was used to DNA amplification by PCR. The COI gene was used as a DNA barcoding marker. The 570 bp COI gene sequences were obtained from all 45 individuals. The haplotype network showed no genetic variability among the population stocks, which was confirmed by Molecular Variance Analysis. The final alignment showed that inside species there is haplotype sharing among the sampled localities, since one haplotype is shared by 38 individuals belonging to all the five sampled regions, with no biogeographic pattern. This result is reasonable since there are no geographical barriers or habitat disjunction that might serve as a barrier to gene flow among the sampled localities. Possible reasons and consequences of the genetic homogeneity found are discussed. The results complement ecological studies concerning the offseason: since it is a single stock, the same protection strategy can be applied. However, the genetic homogeneity found in this study combined with the intensive fishery effort and the species biology can result in severe consequences for the F. paulensis.
publishDate 2015
dc.date.none.fl_str_mv 2015-12-05
2018-12-11T16:59:25Z
2018-12-11T16:59:25Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.ecss.2015.07.009
Estuarine, Coastal and Shelf Science, v. 166, p. 124-130.
0272-7714
http://hdl.handle.net/11449/172263
10.1016/j.ecss.2015.07.009
2-s2.0-84949217862
2-s2.0-84949217862.pdf
url http://dx.doi.org/10.1016/j.ecss.2015.07.009
http://hdl.handle.net/11449/172263
identifier_str_mv Estuarine, Coastal and Shelf Science, v. 166, p. 124-130.
0272-7714
10.1016/j.ecss.2015.07.009
2-s2.0-84949217862
2-s2.0-84949217862.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Estuarine, Coastal and Shelf Science
1,059
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 124-130
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808128916717568000