DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2015000700610&lng=en&nrm=iso&tlng=en http://hdl.handle.net/11449/128403 |
Resumo: | Li-Fraumeni syndrome (LFS) is a rare, autosomal dominant, hereditary cancer predisposition disorder. In Brazil, the p.R337H TP53 founder mutation causes the variant form of LFS, Li-Fraumeni-like syndrome. The occurrence of cancer and age of disease onset are known to vary, even in patients carrying the same mutation, and several mechanisms such as genetic and epigenetic alterations may be involved in this variability. However, the extent of involvement of such events has not been clarified. It is well established that p53 regulates several pathways, including the thymine DNA glycosylase (TDG) pathway, which regulates the DNA methylation of several genes. This study aimed to identify the DNA methylation pattern of genes potentially related to the TDG pathway (CDKN2A, FOXA1, HOXD8, OCT4, SOX2, and SOX17) in 30 patients with germline TP53 mutations, 10 patients with wild-type TP53, and 10 healthy individuals. We also evaluated TDG expression in patients with adrenocortical tumors (ADR) with and without the p.R337H TP53 mutation. Gene methylation patterns of peripheral blood DNA samples assessed by pyrosequencing revealed no significant differences between the three groups. However, increased TDG expression was observed by quantitative reverse transcription PCR in p.R337H carriers with ADR. Considering the rarity of this phenotype and the relevance of these findings, further studies using a larger sample set are necessary to confirm our results. |
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DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutationsLi-Fraumeni syndromeTP53 geneTDGMethylationLi-Fraumeni syndrome (LFS) is a rare, autosomal dominant, hereditary cancer predisposition disorder. In Brazil, the p.R337H TP53 founder mutation causes the variant form of LFS, Li-Fraumeni-like syndrome. The occurrence of cancer and age of disease onset are known to vary, even in patients carrying the same mutation, and several mechanisms such as genetic and epigenetic alterations may be involved in this variability. However, the extent of involvement of such events has not been clarified. It is well established that p53 regulates several pathways, including the thymine DNA glycosylase (TDG) pathway, which regulates the DNA methylation of several genes. This study aimed to identify the DNA methylation pattern of genes potentially related to the TDG pathway (CDKN2A, FOXA1, HOXD8, OCT4, SOX2, and SOX17) in 30 patients with germline TP53 mutations, 10 patients with wild-type TP53, and 10 healthy individuals. We also evaluated TDG expression in patients with adrenocortical tumors (ADR) with and without the p.R337H TP53 mutation. Gene methylation patterns of peripheral blood DNA samples assessed by pyrosequencing revealed no significant differences between the three groups. However, increased TDG expression was observed by quantitative reverse transcription PCR in p.R337H carriers with ADR. Considering the rarity of this phenotype and the relevance of these findings, further studies using a larger sample set are necessary to confirm our results.National Institute of Science and Technology in Oncogenomics (INCITO)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)A. C. Camargo Cancer Center, Laboratório de Oncogenética MolecularA. C. Camargo Cancer Center, Laboratrio NeoGeneA. C. Camargo Cancer Center, Departamento de OncogenéticaUniversidade de São Paulo, Instituto de Matemática e EstatísticaUniversidade Estadual Paulista, Departamento de Urologia, Faculdade de Medicina de BotucatuINCITO: 573589/2008-9CNPq: 830068/2001-5Assoc Bras Divulg CientificaA. C. Camargo Cancer CenterUniversidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)Fortes, Fernanda PaschoalKuasne, Hellen [UNESP]Marchi, Fabio AlbuquerqueMiranda, Priscila MayrinkRogatto, Silvia Regina [UNESP]Achatz, Maria Isabel2015-10-21T13:09:36Z2015-10-21T13:09:36Z2015-06-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article610-615application/pdfhttp://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2015000700610&lng=en&nrm=iso&tlng=enBrazilian Journal Of Medical And Biological Research. Sao Paulo: Assoc Bras Divulg Cientifica, v. 48, n. 7, p. 610-615, 2015.0100-879Xhttp://hdl.handle.net/11449/12840310.1590/1414-431X20154026S0100-879X2015000700610WOS:000357743700005S0100-879X2015000700610.pdf2259986546265579Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Journal Of Medical And Biological Research1.492info:eu-repo/semantics/openAccess2024-09-03T14:30:11Zoai:repositorio.unesp.br:11449/128403Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-09-03T14:30:11Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations |
title |
DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations |
spellingShingle |
DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations Fortes, Fernanda Paschoal Li-Fraumeni syndrome TP53 gene TDG Methylation |
title_short |
DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations |
title_full |
DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations |
title_fullStr |
DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations |
title_full_unstemmed |
DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations |
title_sort |
DNA methylation patterns of candidate genes regulated by thymine DNA glycosylase in patients with TP53 germline mutations |
author |
Fortes, Fernanda Paschoal |
author_facet |
Fortes, Fernanda Paschoal Kuasne, Hellen [UNESP] Marchi, Fabio Albuquerque Miranda, Priscila Mayrink Rogatto, Silvia Regina [UNESP] Achatz, Maria Isabel |
author_role |
author |
author2 |
Kuasne, Hellen [UNESP] Marchi, Fabio Albuquerque Miranda, Priscila Mayrink Rogatto, Silvia Regina [UNESP] Achatz, Maria Isabel |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
A. C. Camargo Cancer Center Universidade Estadual Paulista (Unesp) Universidade de São Paulo (USP) |
dc.contributor.author.fl_str_mv |
Fortes, Fernanda Paschoal Kuasne, Hellen [UNESP] Marchi, Fabio Albuquerque Miranda, Priscila Mayrink Rogatto, Silvia Regina [UNESP] Achatz, Maria Isabel |
dc.subject.por.fl_str_mv |
Li-Fraumeni syndrome TP53 gene TDG Methylation |
topic |
Li-Fraumeni syndrome TP53 gene TDG Methylation |
description |
Li-Fraumeni syndrome (LFS) is a rare, autosomal dominant, hereditary cancer predisposition disorder. In Brazil, the p.R337H TP53 founder mutation causes the variant form of LFS, Li-Fraumeni-like syndrome. The occurrence of cancer and age of disease onset are known to vary, even in patients carrying the same mutation, and several mechanisms such as genetic and epigenetic alterations may be involved in this variability. However, the extent of involvement of such events has not been clarified. It is well established that p53 regulates several pathways, including the thymine DNA glycosylase (TDG) pathway, which regulates the DNA methylation of several genes. This study aimed to identify the DNA methylation pattern of genes potentially related to the TDG pathway (CDKN2A, FOXA1, HOXD8, OCT4, SOX2, and SOX17) in 30 patients with germline TP53 mutations, 10 patients with wild-type TP53, and 10 healthy individuals. We also evaluated TDG expression in patients with adrenocortical tumors (ADR) with and without the p.R337H TP53 mutation. Gene methylation patterns of peripheral blood DNA samples assessed by pyrosequencing revealed no significant differences between the three groups. However, increased TDG expression was observed by quantitative reverse transcription PCR in p.R337H carriers with ADR. Considering the rarity of this phenotype and the relevance of these findings, further studies using a larger sample set are necessary to confirm our results. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015-10-21T13:09:36Z 2015-10-21T13:09:36Z 2015-06-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2015000700610&lng=en&nrm=iso&tlng=en Brazilian Journal Of Medical And Biological Research. Sao Paulo: Assoc Bras Divulg Cientifica, v. 48, n. 7, p. 610-615, 2015. 0100-879X http://hdl.handle.net/11449/128403 10.1590/1414-431X20154026 S0100-879X2015000700610 WOS:000357743700005 S0100-879X2015000700610.pdf 2259986546265579 |
url |
http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2015000700610&lng=en&nrm=iso&tlng=en http://hdl.handle.net/11449/128403 |
identifier_str_mv |
Brazilian Journal Of Medical And Biological Research. Sao Paulo: Assoc Bras Divulg Cientifica, v. 48, n. 7, p. 610-615, 2015. 0100-879X 10.1590/1414-431X20154026 S0100-879X2015000700610 WOS:000357743700005 S0100-879X2015000700610.pdf 2259986546265579 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Brazilian Journal Of Medical And Biological Research 1.492 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
610-615 application/pdf |
dc.publisher.none.fl_str_mv |
Assoc Bras Divulg Cientifica |
publisher.none.fl_str_mv |
Assoc Bras Divulg Cientifica |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
_version_ |
1810021395198902272 |