Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
DOI: | 10.1016/j.ijbiomac.2016.11.033 |
Texto Completo: | http://dx.doi.org/10.1016/j.ijbiomac.2016.11.033 http://hdl.handle.net/11449/173810 |
Resumo: | hRSV is the major causative agent of acute respiratory infections. Among its eleven proteins, M2-1 is a transcription antiterminator, making it an interesting target for antivirals. Quercetin is a flavonol which inhibits some virus infectivity and replication. In the present work, the M2-1 gene was cloned, expressed and the protein was purified. Thermal stability and secondary structure were analyzed by circular dichroism and the interaction with Quercetin was evaluated by fluorescence spectroscopy. Molecular docking experiments were performed to understand this mechanism of interaction. The purified protein is mainly composed of α-helix, with a melting temperature of 328.6 K (≈55 °C). M2-1 titration with Quercetin showed it interacts with two sites, one with a strong constant association K1 (site 1 ≈ 1.5 × 106 M−1) by electrostatic interactions, and another with a weak constant association K2 (site 2 ≈ 1.1 × 105 M−1) by a hydrophobic interaction. Ligand's docking shows it interacts with the N-terminus face in a more polar pocket and, between the domains of oligomerization and RNA and P protein interaction, in a more hydrophobic pocket, as predicted by experimental data. Therefore, we postulated this ligand could be interacting with important domains of the protein, avoiding viral replication and budding. |
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Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetinBiophysical analyseshRSVM2-1Molecular dockingQuercetinhRSV is the major causative agent of acute respiratory infections. Among its eleven proteins, M2-1 is a transcription antiterminator, making it an interesting target for antivirals. Quercetin is a flavonol which inhibits some virus infectivity and replication. In the present work, the M2-1 gene was cloned, expressed and the protein was purified. Thermal stability and secondary structure were analyzed by circular dichroism and the interaction with Quercetin was evaluated by fluorescence spectroscopy. Molecular docking experiments were performed to understand this mechanism of interaction. The purified protein is mainly composed of α-helix, with a melting temperature of 328.6 K (≈55 °C). M2-1 titration with Quercetin showed it interacts with two sites, one with a strong constant association K1 (site 1 ≈ 1.5 × 106 M−1) by electrostatic interactions, and another with a weak constant association K2 (site 2 ≈ 1.1 × 105 M−1) by a hydrophobic interaction. Ligand's docking shows it interacts with the N-terminus face in a more polar pocket and, between the domains of oligomerization and RNA and P protein interaction, in a more hydrophobic pocket, as predicted by experimental data. Therefore, we postulated this ligand could be interacting with important domains of the protein, avoiding viral replication and budding.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Instituto de Biociências Letras e Ciências Exatas UNESP Univ Estadual Paulista Campus São José do Rio Preto Departamento de BiologiaInstituto de Biociências Letras e Ciências Exatas UNESP Univ Estadual Paulista Campus São José do Rio Preto Departamento de FísicaInstituto de Biociências Letras e Ciências Exatas UNESP Univ Estadual Paulista Campus São José do Rio Preto Centro Multiusuário de Inovação Biomolecular Laboratório de Biologia MolecularInstituto de Biociências Letras e Ciências Exatas UNESP Univ Estadual Paulista Campus São José do Rio Preto Departamento de Química e Ciências AmbientaisFaculdade de Ciências e Letras UNESP Univ Estadual Paulista Campus Assis Departamento de Ciências Biológicas Laboratório de Imunologia Celular e MolecularInstituto de Biociências Letras e Ciências Exatas UNESP Univ Estadual Paulista Campus São José do Rio Preto Departamento de BiologiaInstituto de Biociências Letras e Ciências Exatas UNESP Univ Estadual Paulista Campus São José do Rio Preto Departamento de FísicaInstituto de Biociências Letras e Ciências Exatas UNESP Univ Estadual Paulista Campus São José do Rio Preto Centro Multiusuário de Inovação Biomolecular Laboratório de Biologia MolecularInstituto de Biociências Letras e Ciências Exatas UNESP Univ Estadual Paulista Campus São José do Rio Preto Departamento de Química e Ciências AmbientaisFaculdade de Ciências e Letras UNESP Univ Estadual Paulista Campus Assis Departamento de Ciências Biológicas Laboratório de Imunologia Celular e MolecularFAPESP: 13/24355-2Universidade Estadual Paulista (Unesp)Teixeira, Thiago Salem Pançonato [UNESP]Caruso, Ícaro Putinhon [UNESP]Lopes, Bruno Rafael Pereira [UNESP]Regasini, Luis Octávio [UNESP]Toledo, Karina Alves de [UNESP]Fossey, Marcelo Andrés [UNESP]Souza, Fátima Pereira de [UNESP]2018-12-11T17:07:51Z2018-12-11T17:07:51Z2017-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article63-71application/pdfhttp://dx.doi.org/10.1016/j.ijbiomac.2016.11.033International Journal of Biological Macromolecules, v. 95, p. 63-71.1879-00030141-8130http://hdl.handle.net/11449/17381010.1016/j.ijbiomac.2016.11.0332-s2.0-849959005122-s2.0-84995900512.pdf57725657743040200992736452764550410156207766361933135113347839860000-0001-7212-67940000-0002-4731-4977Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengInternational Journal of Biological Macromolecules0,917info:eu-repo/semantics/openAccess2024-06-13T17:38:42Zoai:repositorio.unesp.br:11449/173810Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:16:21.274541Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin |
title |
Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin |
spellingShingle |
Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin Teixeira, Thiago Salem Pançonato [UNESP] Biophysical analyses hRSV M2-1 Molecular docking Quercetin Teixeira, Thiago Salem Pançonato [UNESP] Biophysical analyses hRSV M2-1 Molecular docking Quercetin |
title_short |
Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin |
title_full |
Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin |
title_fullStr |
Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin |
title_full_unstemmed |
Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin |
title_sort |
Biophysical characterization of the interaction between M2-1 protein of hRSV and quercetin |
author |
Teixeira, Thiago Salem Pançonato [UNESP] |
author_facet |
Teixeira, Thiago Salem Pançonato [UNESP] Teixeira, Thiago Salem Pançonato [UNESP] Caruso, Ícaro Putinhon [UNESP] Lopes, Bruno Rafael Pereira [UNESP] Regasini, Luis Octávio [UNESP] Toledo, Karina Alves de [UNESP] Fossey, Marcelo Andrés [UNESP] Souza, Fátima Pereira de [UNESP] Caruso, Ícaro Putinhon [UNESP] Lopes, Bruno Rafael Pereira [UNESP] Regasini, Luis Octávio [UNESP] Toledo, Karina Alves de [UNESP] Fossey, Marcelo Andrés [UNESP] Souza, Fátima Pereira de [UNESP] |
author_role |
author |
author2 |
Caruso, Ícaro Putinhon [UNESP] Lopes, Bruno Rafael Pereira [UNESP] Regasini, Luis Octávio [UNESP] Toledo, Karina Alves de [UNESP] Fossey, Marcelo Andrés [UNESP] Souza, Fátima Pereira de [UNESP] |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Teixeira, Thiago Salem Pançonato [UNESP] Caruso, Ícaro Putinhon [UNESP] Lopes, Bruno Rafael Pereira [UNESP] Regasini, Luis Octávio [UNESP] Toledo, Karina Alves de [UNESP] Fossey, Marcelo Andrés [UNESP] Souza, Fátima Pereira de [UNESP] |
dc.subject.por.fl_str_mv |
Biophysical analyses hRSV M2-1 Molecular docking Quercetin |
topic |
Biophysical analyses hRSV M2-1 Molecular docking Quercetin |
description |
hRSV is the major causative agent of acute respiratory infections. Among its eleven proteins, M2-1 is a transcription antiterminator, making it an interesting target for antivirals. Quercetin is a flavonol which inhibits some virus infectivity and replication. In the present work, the M2-1 gene was cloned, expressed and the protein was purified. Thermal stability and secondary structure were analyzed by circular dichroism and the interaction with Quercetin was evaluated by fluorescence spectroscopy. Molecular docking experiments were performed to understand this mechanism of interaction. The purified protein is mainly composed of α-helix, with a melting temperature of 328.6 K (≈55 °C). M2-1 titration with Quercetin showed it interacts with two sites, one with a strong constant association K1 (site 1 ≈ 1.5 × 106 M−1) by electrostatic interactions, and another with a weak constant association K2 (site 2 ≈ 1.1 × 105 M−1) by a hydrophobic interaction. Ligand's docking shows it interacts with the N-terminus face in a more polar pocket and, between the domains of oligomerization and RNA and P protein interaction, in a more hydrophobic pocket, as predicted by experimental data. Therefore, we postulated this ligand could be interacting with important domains of the protein, avoiding viral replication and budding. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-02-01 2018-12-11T17:07:51Z 2018-12-11T17:07:51Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.ijbiomac.2016.11.033 International Journal of Biological Macromolecules, v. 95, p. 63-71. 1879-0003 0141-8130 http://hdl.handle.net/11449/173810 10.1016/j.ijbiomac.2016.11.033 2-s2.0-84995900512 2-s2.0-84995900512.pdf 5772565774304020 0992736452764550 4101562077663619 3313511334783986 0000-0001-7212-6794 0000-0002-4731-4977 |
url |
http://dx.doi.org/10.1016/j.ijbiomac.2016.11.033 http://hdl.handle.net/11449/173810 |
identifier_str_mv |
International Journal of Biological Macromolecules, v. 95, p. 63-71. 1879-0003 0141-8130 10.1016/j.ijbiomac.2016.11.033 2-s2.0-84995900512 2-s2.0-84995900512.pdf 5772565774304020 0992736452764550 4101562077663619 3313511334783986 0000-0001-7212-6794 0000-0002-4731-4977 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
International Journal of Biological Macromolecules 0,917 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
63-71 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1822182279436304384 |
dc.identifier.doi.none.fl_str_mv |
10.1016/j.ijbiomac.2016.11.033 |