Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1139/gen-2022-0015 http://hdl.handle.net/11449/237896 |
Resumo: | Genome size (GS) or DNA nuclear content is considered a useful index for making inferences about evolutionary models and life history in animals, including taxonomic, biogeographical, and ecological scenarios. However, patterns of GS variation and their causes in crustaceans are still poorly understood. This study aimed to describe the GS of five Neotropical Synalpheus non-gambarelloides shrimps (S. apioceros, S. minus, S. brevicarpus, S. fritzmueller, and S. scaphoceris) and compare the C-values of all Caridea infraorder in terms of geography and phylogenetics. All animals were sampled in the coast of Sao Paulo State, Brazil, and GS was assessed by flow cytometry analysis (FCA). The C-values ranged from 7.89 pg in S. apioceros to 12.24 pg in S. scaphoceris. Caridean shrimps had higher GS than other Decapoda crustaceans. The results reveal a tendency of obtaining larger genomes in species with direct development in Synalpheus shrimps. In addition, a tendency of positive biogeographical (latitudinal) correlation with Caridea infraorder was also observed. This study provides remarkable and new protocol for FCA (using gating strategy for the analysis), which led to the discovery of new information regarding GS of caridean shrimps, especially for Neotropical Synalpheus, which represents the second-largest group in the Caridea infraorder. |
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Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus speciesC-valueSnapping shrimpDecapodaDNA contentGenome size (GS) or DNA nuclear content is considered a useful index for making inferences about evolutionary models and life history in animals, including taxonomic, biogeographical, and ecological scenarios. However, patterns of GS variation and their causes in crustaceans are still poorly understood. This study aimed to describe the GS of five Neotropical Synalpheus non-gambarelloides shrimps (S. apioceros, S. minus, S. brevicarpus, S. fritzmueller, and S. scaphoceris) and compare the C-values of all Caridea infraorder in terms of geography and phylogenetics. All animals were sampled in the coast of Sao Paulo State, Brazil, and GS was assessed by flow cytometry analysis (FCA). The C-values ranged from 7.89 pg in S. apioceros to 12.24 pg in S. scaphoceris. Caridean shrimps had higher GS than other Decapoda crustaceans. The results reveal a tendency of obtaining larger genomes in species with direct development in Synalpheus shrimps. In addition, a tendency of positive biogeographical (latitudinal) correlation with Caridea infraorder was also observed. This study provides remarkable and new protocol for FCA (using gating strategy for the analysis), which led to the discovery of new information regarding GS of caridean shrimps, especially for Neotropical Synalpheus, which represents the second-largest group in the Caridea infraorder.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Univ Estadual Paulista Julio Mesquita Filho UNESP, Rua Prof Dr Antonio Celso Wagner Zanin, 250, BR-18618689 Botucatu, SP, BrazilUniv Austral Chile, Fac Ciencias, Inst Ciencias Marinas & Limnol, Valdivia 5090000, ChileCtr Invest Dinam Ecosistemas Marinos Altas Latitud, Punta Arenas 5090000, ChileUniv Serena, Dept Biol, La Serena 1720256, ChileUniv Serena, Inst Invest Multidisciplinar Ciencia & Tecnol, La Serena 1720256, ChileUniv Sao Paulo, Dept Anim Reprod, FMVZ, Ave Prof Dr Orlando Marques Pa, 87, BR-05508270 Sao Paulo, SP, BrazilInst Fomento Pesquero, Div Invest Acuicultura, Dept Salud Hidrobiol, Puerto Montt 2361827, ChileUniv Austral Chile, Fac Ciencias, Inst Ciencias Ambientales & Evolut, Casilla 567, Valdivia 5090000, ChileOeste Paulista Univ, Dept Hlth Sci, UNOESTE, Ave Toto Pacheco, 2945, Zona Ind, BR-17213700 Jau, SP, BrazilUniv Estadual Paulista, Rodovia Araraquara-Jau km 1, BR-14801902 Araraquara, SP, BrazilUniv Estadual Paulista Julio Mesquita Filho UNESP, Rua Prof Dr Antonio Celso Wagner Zanin, 250, BR-18618689 Botucatu, SP, BrazilUniv Estadual Paulista, Rodovia Araraquara-Jau km 1, BR-14801902 Araraquara, SP, BrazilFAPESP: 2016/20177-0CNPq: PQ 311034/2018-7CAPES: CAPES PRINT 88881.310767/201801CAPES: PROEX 23038.000802/2018-25Canadian Science PublishingUniversidade Estadual Paulista (UNESP)Univ Austral ChileCtr Invest Dinam Ecosistemas Marinos Altas LatitudUniv SerenaUniversidade de São Paulo (USP)Inst Fomento PesqueroOeste Paulista UnivMoraes, Isabela R. R. [UNESP]Pardo, Luis MiguelAraya-Jaime, CristianWolf, Milena Regina [UNESP]Yasui, George ShiguekiSolano-Iguaran, Jaiber J.Romagnoli, Graziela GoreteAlevi, Kaio Cesar Chaboli [UNESP]Castilho, Antonio Leao [UNESP]2022-11-30T13:47:54Z2022-11-30T13:47:54Z2022-08-02info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article10http://dx.doi.org/10.1139/gen-2022-0015Genome. Ottawa: Canadian Science Publishing, 10 p., 2022.0831-2796http://hdl.handle.net/11449/23789610.1139/gen-2022-0015WOS:000845065600001Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenomeinfo:eu-repo/semantics/openAccess2024-09-09T14:00:30Zoai:repositorio.unesp.br:11449/237896Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-09-09T14:00:30Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species |
title |
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species |
spellingShingle |
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species Moraes, Isabela R. R. [UNESP] C-value Snapping shrimp Decapoda DNA content |
title_short |
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species |
title_full |
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species |
title_fullStr |
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species |
title_full_unstemmed |
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species |
title_sort |
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species |
author |
Moraes, Isabela R. R. [UNESP] |
author_facet |
Moraes, Isabela R. R. [UNESP] Pardo, Luis Miguel Araya-Jaime, Cristian Wolf, Milena Regina [UNESP] Yasui, George Shigueki Solano-Iguaran, Jaiber J. Romagnoli, Graziela Gorete Alevi, Kaio Cesar Chaboli [UNESP] Castilho, Antonio Leao [UNESP] |
author_role |
author |
author2 |
Pardo, Luis Miguel Araya-Jaime, Cristian Wolf, Milena Regina [UNESP] Yasui, George Shigueki Solano-Iguaran, Jaiber J. Romagnoli, Graziela Gorete Alevi, Kaio Cesar Chaboli [UNESP] Castilho, Antonio Leao [UNESP] |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) Univ Austral Chile Ctr Invest Dinam Ecosistemas Marinos Altas Latitud Univ Serena Universidade de São Paulo (USP) Inst Fomento Pesquero Oeste Paulista Univ |
dc.contributor.author.fl_str_mv |
Moraes, Isabela R. R. [UNESP] Pardo, Luis Miguel Araya-Jaime, Cristian Wolf, Milena Regina [UNESP] Yasui, George Shigueki Solano-Iguaran, Jaiber J. Romagnoli, Graziela Gorete Alevi, Kaio Cesar Chaboli [UNESP] Castilho, Antonio Leao [UNESP] |
dc.subject.por.fl_str_mv |
C-value Snapping shrimp Decapoda DNA content |
topic |
C-value Snapping shrimp Decapoda DNA content |
description |
Genome size (GS) or DNA nuclear content is considered a useful index for making inferences about evolutionary models and life history in animals, including taxonomic, biogeographical, and ecological scenarios. However, patterns of GS variation and their causes in crustaceans are still poorly understood. This study aimed to describe the GS of five Neotropical Synalpheus non-gambarelloides shrimps (S. apioceros, S. minus, S. brevicarpus, S. fritzmueller, and S. scaphoceris) and compare the C-values of all Caridea infraorder in terms of geography and phylogenetics. All animals were sampled in the coast of Sao Paulo State, Brazil, and GS was assessed by flow cytometry analysis (FCA). The C-values ranged from 7.89 pg in S. apioceros to 12.24 pg in S. scaphoceris. Caridean shrimps had higher GS than other Decapoda crustaceans. The results reveal a tendency of obtaining larger genomes in species with direct development in Synalpheus shrimps. In addition, a tendency of positive biogeographical (latitudinal) correlation with Caridea infraorder was also observed. This study provides remarkable and new protocol for FCA (using gating strategy for the analysis), which led to the discovery of new information regarding GS of caridean shrimps, especially for Neotropical Synalpheus, which represents the second-largest group in the Caridea infraorder. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-11-30T13:47:54Z 2022-11-30T13:47:54Z 2022-08-02 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1139/gen-2022-0015 Genome. Ottawa: Canadian Science Publishing, 10 p., 2022. 0831-2796 http://hdl.handle.net/11449/237896 10.1139/gen-2022-0015 WOS:000845065600001 |
url |
http://dx.doi.org/10.1139/gen-2022-0015 http://hdl.handle.net/11449/237896 |
identifier_str_mv |
Genome. Ottawa: Canadian Science Publishing, 10 p., 2022. 0831-2796 10.1139/gen-2022-0015 WOS:000845065600001 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genome |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
10 |
dc.publisher.none.fl_str_mv |
Canadian Science Publishing |
publisher.none.fl_str_mv |
Canadian Science Publishing |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
_version_ |
1810021309785047040 |