Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum

Detalhes bibliográficos
Autor(a) principal: ARAÚJO, Bianca Galúcio Pereira
Data de Publicação: 2022
Tipo de documento: Tese
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFRPE
Texto Completo: http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/9502
Resumo: Tomato (Solanum lycopersicum L.) is one of the most economically important vegetables in the world. Ralstonia pseudosolanacearum (Rp) is a phytopathogenic bacterium that infects the xylem of plants, causing the devastating disease known as bacterial wilt (MB), which attacks more than 200 plant species worldwide. The objective of this work was to clarify the mechanisms of resistance and susceptibility, at the proteomic level, of two cultivars resistant to Rp: Hawaii 7996 and Yoshimatsu and a susceptible Caline IPA-7, in response to inoculation of the strain CCRMRs202 of Rp, at four days after inoculation. The methodology consisted of the extraction of total soluble proteins, injection into a nano-LC-MS/MS mass spectrometer, analysis of the spectra obtained and identification of proteins in MaxQuant software, statistical analysis and selection of proteins differentially accumulated between treatments in Perseus and categorization by gene ontology in UniProt and Blast2GO v. 6.0. A total of 1385 proteins were obtained when comparing the cultivars Yoshimatsu and Caline IPA-7 and 1306 proteins when comparing the cultivars Hawaii 7996 and Yoshimatsu. Of these, those directly linked to the defense response were selected by gene ontology. Several proteins related to pathogenesis (PR-proteins) that have antimicrobial action were identified, including PR1, PR5, PR10 and PR14; the universal stress protein (PHOs/USP), known to promote resistance to multiple stresses, regulation of ROS homeostasis and regulation of plant growth/development; the annexins, related to the anti-oxidant system and pectinoesterase e xyloglucan endotransglucosylase (XET), both related to the cell wall. Their accumulation, either exclusively or differently in cultivars under stress, broadens the understanding of different strategies of resistance to the pathogen, and can significantly contribute to tomato genetic improvement programs in a process of assisted selection of genotypes resistant to bacterial wilt.
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spelling CARVALHO FILHO, José Luiz Sandes deCARVALHO, Rejane Rodrigues da Costa eSILVA, Fabiana Aparecida CavalcanteMENEZES, DimasCALSA JUNIOR, TercilioCOSTA, Kleyton Danilo da Silvahttp://lattes.cnpq.br/7174138631931424ARAÚJO, Bianca Galúcio Pereira2024-02-15T21:27:07Z2022-06-30ARAÚJO, Bianca Galúcio Pereira. Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum. 2022. 105 f. Tese (Programa de Pós-Graduação em Melhoramento Genético de Plantas) - Universidade Federal Rural de Pernambuco, Recife.http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/9502Tomato (Solanum lycopersicum L.) is one of the most economically important vegetables in the world. Ralstonia pseudosolanacearum (Rp) is a phytopathogenic bacterium that infects the xylem of plants, causing the devastating disease known as bacterial wilt (MB), which attacks more than 200 plant species worldwide. The objective of this work was to clarify the mechanisms of resistance and susceptibility, at the proteomic level, of two cultivars resistant to Rp: Hawaii 7996 and Yoshimatsu and a susceptible Caline IPA-7, in response to inoculation of the strain CCRMRs202 of Rp, at four days after inoculation. The methodology consisted of the extraction of total soluble proteins, injection into a nano-LC-MS/MS mass spectrometer, analysis of the spectra obtained and identification of proteins in MaxQuant software, statistical analysis and selection of proteins differentially accumulated between treatments in Perseus and categorization by gene ontology in UniProt and Blast2GO v. 6.0. A total of 1385 proteins were obtained when comparing the cultivars Yoshimatsu and Caline IPA-7 and 1306 proteins when comparing the cultivars Hawaii 7996 and Yoshimatsu. Of these, those directly linked to the defense response were selected by gene ontology. Several proteins related to pathogenesis (PR-proteins) that have antimicrobial action were identified, including PR1, PR5, PR10 and PR14; the universal stress protein (PHOs/USP), known to promote resistance to multiple stresses, regulation of ROS homeostasis and regulation of plant growth/development; the annexins, related to the anti-oxidant system and pectinoesterase e xyloglucan endotransglucosylase (XET), both related to the cell wall. Their accumulation, either exclusively or differently in cultivars under stress, broadens the understanding of different strategies of resistance to the pathogen, and can significantly contribute to tomato genetic improvement programs in a process of assisted selection of genotypes resistant to bacterial wilt.O tomate (Solanum lycopersicum L.) é uma das hortaliças de maior importância econômica no mundo. Ralstonia pseudosolanacearum (Rp) é uma bactéria fitopatogênica que infecta o xilema de plantas, causando a devastadora doença conhecida como murcha bacteriana (MB), que ataca mais de 200 espécies vegetais em todo o mundo. O objetivo desse trabalho foi esclarecer os mecanismos de resistência e susceptibilidade, a nível proteômico, de duas cultivares resistentes a Rp: Hawaii 7996 e Yoshimatsu e uma susceptível Caline IPA-7, em resposta a inoculação da estirpe CCRMRs202 de Rp, aos quatro dias após inoculação. A metodologia consistiu na extração das proteínas solúveis totais, injeção em espectrômetro de massas nano-LC-MS/MS, análise dos espectros obtidos e identificação das proteínas no software MaxQuant, análise estatística e seleção de proteínas diferencialmente acumuladas entres os tratamentos no software Perseus e categorização por ontologia gênica no Uniprot e Blast2GO v. 6.0. Foi obtido um total de 1385 proteínas no comparativo das cultivares Yoshimatsu e Caline IPA-7 e 1306 proteínas no comparativo entre as cultivares Hawaii 7996 e Yoshimatsu. Destas, foram selecionadas por ontologia gênica, as diretamente ligadas à resposta de defesa. Identificou-se diversas proteínas relacionadas à patogênese (PRs) que possuem ação antimicrobiana, destacando-se as PR1, PR5, PR10 e PR14; a proteína universal do estresse (PHOs/USP), conhecida por promover resistência a estresses múltiplos, regulação da homeostase de ROS e regulação do crescimento/desenvolvimento das plantas; as anexinas, relacionadas ao sistema antioxidante, além da pectinesterase e xiloglucana endotransglicosilase (XET), ambas relacionadas à parede celular. O acúmulo delas, seja de forma exclusiva ou diferenciada nas cultivares sob estresse amplia o entendimento para diferentes estratégias de resistência ao patógeno, podendo contribuir de forma significativa nos programas de melhoramento genético do tomateiro em um processo de seleção assistida de genótipos resistentes à murcha bacteriana.Submitted by (ana.araujo@ufrpe.br) on 2024-02-15T21:27:07Z No. of bitstreams: 1 Bianca Galucio Pereira Araujo.pdf: 1602779 bytes, checksum: ca1cec08629b1ba6b4f49b19d30b6dda (MD5)Made available in DSpace on 2024-02-15T21:27:07Z (GMT). No. of bitstreams: 1 Bianca Galucio Pereira Araujo.pdf: 1602779 bytes, checksum: ca1cec08629b1ba6b4f49b19d30b6dda (MD5) Previous issue date: 2022-06-30application/pdfporUniversidade Federal Rural de PernambucoPrograma de Pós-Graduação em Melhoramento Genético de PlantasUFRPEBrasilDepartamento de AgronomiaTomateSolanum lycopersicumMelhoramento genéticoResistência à doençaMurcha bacterianaProteômicaFITOTECNIA::MELHORAMENTO VEGETALProspecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearumProspecting molecular biomarkers of resistance from tomato to bacterial wilt caused by Ralstonia pseudosolanacearuminfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis-6234655866848882505600600600-68005538799722292052615607299470131967info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFRPEinstname:Universidade Federal Rural de Pernambuco (UFRPE)instacron:UFRPEORIGINALBianca Galucio Pereira Araujo.pdfBianca Galucio Pereira Araujo.pdfapplication/pdf1602779http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/9502/2/Bianca+Galucio+Pereira+Araujo.pdfca1cec08629b1ba6b4f49b19d30b6ddaMD52LICENSElicense.txtlicense.txttext/plain; charset=utf-82165http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/9502/1/license.txtbd3efa91386c1718a7f26a329fdcb468MD51tede2/95022024-02-15 18:27:07.552oai:tede2:tede2/9502Tk9UQTogQ09MT1FVRSBBUVVJIEEgU1VBIFBSw5NQUklBIExJQ0VOw4dBCkVzdGEgbGljZW7Dp2EgZGUgZXhlbXBsbyDDqSBmb3JuZWNpZGEgYXBlbmFzIHBhcmEgZmlucyBpbmZvcm1hdGl2b3MuCgpMSUNFTsOHQSBERSBESVNUUklCVUnDh8ODTyBOw4NPLUVYQ0xVU0lWQQoKQ29tIGEgYXByZXNlbnRhw6fDo28gZGVzdGEgbGljZW7Dp2EsIHZvY8OqIChvIGF1dG9yIChlcykgb3UgbyB0aXR1bGFyIGRvcyBkaXJlaXRvcyBkZSBhdXRvcikgY29uY2VkZSDDoCBVbml2ZXJzaWRhZGUgClhYWCAoU2lnbGEgZGEgVW5pdmVyc2lkYWRlKSBvIGRpcmVpdG8gbsOjby1leGNsdXNpdm8gZGUgcmVwcm9kdXppciwgIHRyYWR1emlyIChjb25mb3JtZSBkZWZpbmlkbyBhYmFpeG8pLCBlL291IApkaXN0cmlidWlyIGEgc3VhIHRlc2Ugb3UgZGlzc2VydGHDp8OjbyAoaW5jbHVpbmRvIG8gcmVzdW1vKSBwb3IgdG9kbyBvIG11bmRvIG5vIGZvcm1hdG8gaW1wcmVzc28gZSBlbGV0csO0bmljbyBlIAplbSBxdWFscXVlciBtZWlvLCBpbmNsdWluZG8gb3MgZm9ybWF0b3Mgw6F1ZGlvIG91IHbDrWRlby4KClZvY8OqIGNvbmNvcmRhIHF1ZSBhIFNpZ2xhIGRlIFVuaXZlcnNpZGFkZSBwb2RlLCBzZW0gYWx0ZXJhciBvIGNvbnRlw7pkbywgdHJhbnNwb3IgYSBzdWEgdGVzZSBvdSBkaXNzZXJ0YcOnw6NvIApwYXJhIHF1YWxxdWVyIG1laW8gb3UgZm9ybWF0byBwYXJhIGZpbnMgZGUgcHJlc2VydmHDp8Ojby4KClZvY8OqIHRhbWLDqW0gY29uY29yZGEgcXVlIGEgU2lnbGEgZGUgVW5pdmVyc2lkYWRlIHBvZGUgbWFudGVyIG1haXMgZGUgdW1hIGPDs3BpYSBhIHN1YSB0ZXNlIG91IApkaXNzZXJ0YcOnw6NvIHBhcmEgZmlucyBkZSBzZWd1cmFuw6dhLCBiYWNrLXVwIGUgcHJlc2VydmHDp8Ojby4KClZvY8OqIGRlY2xhcmEgcXVlIGEgc3VhIHRlc2Ugb3UgZGlzc2VydGHDp8OjbyDDqSBvcmlnaW5hbCBlIHF1ZSB2b2PDqiB0ZW0gbyBwb2RlciBkZSBjb25jZWRlciBvcyBkaXJlaXRvcyBjb250aWRvcyAKbmVzdGEgbGljZW7Dp2EuIFZvY8OqIHRhbWLDqW0gZGVjbGFyYSBxdWUgbyBkZXDDs3NpdG8gZGEgc3VhIHRlc2Ugb3UgZGlzc2VydGHDp8OjbyBuw6NvLCBxdWUgc2VqYSBkZSBzZXUgCmNvbmhlY2ltZW50bywgaW5mcmluZ2UgZGlyZWl0b3MgYXV0b3JhaXMgZGUgbmluZ3XDqW0uCgpDYXNvIGEgc3VhIHRlc2Ugb3UgZGlzc2VydGHDp8OjbyBjb250ZW5oYSBtYXRlcmlhbCBxdWUgdm9jw6ogbsOjbyBwb3NzdWkgYSB0aXR1bGFyaWRhZGUgZG9zIGRpcmVpdG9zIGF1dG9yYWlzLCB2b2PDqiAKZGVjbGFyYSBxdWUgb2J0ZXZlIGEgcGVybWlzc8OjbyBpcnJlc3RyaXRhIGRvIGRldGVudG9yIGRvcyBkaXJlaXRvcyBhdXRvcmFpcyBwYXJhIGNvbmNlZGVyIMOgIFNpZ2xhIGRlIFVuaXZlcnNpZGFkZSAKb3MgZGlyZWl0b3MgYXByZXNlbnRhZG9zIG5lc3RhIGxpY2Vuw6dhLCBlIHF1ZSBlc3NlIG1hdGVyaWFsIGRlIHByb3ByaWVkYWRlIGRlIHRlcmNlaXJvcyBlc3TDoSBjbGFyYW1lbnRlIAppZGVudGlmaWNhZG8gZSByZWNvbmhlY2lkbyBubyB0ZXh0byBvdSBubyBjb250ZcO6ZG8gZGEgdGVzZSBvdSBkaXNzZXJ0YcOnw6NvIG9yYSBkZXBvc2l0YWRhLgoKQ0FTTyBBIFRFU0UgT1UgRElTU0VSVEHDh8ODTyBPUkEgREVQT1NJVEFEQSBURU5IQSBTSURPIFJFU1VMVEFETyBERSBVTSBQQVRST0PDjU5JTyBPVSAKQVBPSU8gREUgVU1BIEFHw4pOQ0lBIERFIEZPTUVOVE8gT1UgT1VUUk8gT1JHQU5JU01PIFFVRSBOw4NPIFNFSkEgQSBTSUdMQSBERSAKVU5JVkVSU0lEQURFLCBWT0PDiiBERUNMQVJBIFFVRSBSRVNQRUlUT1UgVE9ET1MgRSBRVUFJU1FVRVIgRElSRUlUT1MgREUgUkVWSVPDg08gQ09NTyAKVEFNQsOJTSBBUyBERU1BSVMgT0JSSUdBw4fDlUVTIEVYSUdJREFTIFBPUiBDT05UUkFUTyBPVSBBQ09SRE8uCgpBIFNpZ2xhIGRlIFVuaXZlcnNpZGFkZSBzZSBjb21wcm9tZXRlIGEgaWRlbnRpZmljYXIgY2xhcmFtZW50ZSBvIHNldSBub21lIChzKSBvdSBvKHMpIG5vbWUocykgZG8ocykgCmRldGVudG9yKGVzKSBkb3MgZGlyZWl0b3MgYXV0b3JhaXMgZGEgdGVzZSBvdSBkaXNzZXJ0YcOnw6NvLCBlIG7Do28gZmFyw6EgcXVhbHF1ZXIgYWx0ZXJhw6fDo28sIGFsw6ltIGRhcXVlbGFzIApjb25jZWRpZGFzIHBvciBlc3RhIGxpY2Vuw6dhLgo=Biblioteca Digital de Teses e Dissertaçõeshttp://www.tede2.ufrpe.br:8080/tede/PUBhttp://www.tede2.ufrpe.br:8080/oai/requestbdtd@ufrpe.br ||bdtd@ufrpe.bropendoar:2024-05-28T12:38:21.538084Biblioteca Digital de Teses e Dissertações da UFRPE - Universidade Federal Rural de Pernambuco (UFRPE)false
dc.title.por.fl_str_mv Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum
dc.title.alternative.eng.fl_str_mv Prospecting molecular biomarkers of resistance from tomato to bacterial wilt caused by Ralstonia pseudosolanacearum
title Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum
spellingShingle Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum
ARAÚJO, Bianca Galúcio Pereira
Tomate
Solanum lycopersicum
Melhoramento genético
Resistência à doença
Murcha bacteriana
Proteômica
FITOTECNIA::MELHORAMENTO VEGETAL
title_short Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum
title_full Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum
title_fullStr Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum
title_full_unstemmed Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum
title_sort Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum
author ARAÚJO, Bianca Galúcio Pereira
author_facet ARAÚJO, Bianca Galúcio Pereira
author_role author
dc.contributor.advisor1.fl_str_mv CARVALHO FILHO, José Luiz Sandes de
dc.contributor.advisor-co1.fl_str_mv CARVALHO, Rejane Rodrigues da Costa e
dc.contributor.advisor-co2.fl_str_mv SILVA, Fabiana Aparecida Cavalcante
dc.contributor.referee1.fl_str_mv MENEZES, Dimas
dc.contributor.referee2.fl_str_mv CALSA JUNIOR, Tercilio
dc.contributor.referee3.fl_str_mv COSTA, Kleyton Danilo da Silva
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/7174138631931424
dc.contributor.author.fl_str_mv ARAÚJO, Bianca Galúcio Pereira
contributor_str_mv CARVALHO FILHO, José Luiz Sandes de
CARVALHO, Rejane Rodrigues da Costa e
SILVA, Fabiana Aparecida Cavalcante
MENEZES, Dimas
CALSA JUNIOR, Tercilio
COSTA, Kleyton Danilo da Silva
dc.subject.por.fl_str_mv Tomate
Solanum lycopersicum
Melhoramento genético
Resistência à doença
Murcha bacteriana
Proteômica
topic Tomate
Solanum lycopersicum
Melhoramento genético
Resistência à doença
Murcha bacteriana
Proteômica
FITOTECNIA::MELHORAMENTO VEGETAL
dc.subject.cnpq.fl_str_mv FITOTECNIA::MELHORAMENTO VEGETAL
description Tomato (Solanum lycopersicum L.) is one of the most economically important vegetables in the world. Ralstonia pseudosolanacearum (Rp) is a phytopathogenic bacterium that infects the xylem of plants, causing the devastating disease known as bacterial wilt (MB), which attacks more than 200 plant species worldwide. The objective of this work was to clarify the mechanisms of resistance and susceptibility, at the proteomic level, of two cultivars resistant to Rp: Hawaii 7996 and Yoshimatsu and a susceptible Caline IPA-7, in response to inoculation of the strain CCRMRs202 of Rp, at four days after inoculation. The methodology consisted of the extraction of total soluble proteins, injection into a nano-LC-MS/MS mass spectrometer, analysis of the spectra obtained and identification of proteins in MaxQuant software, statistical analysis and selection of proteins differentially accumulated between treatments in Perseus and categorization by gene ontology in UniProt and Blast2GO v. 6.0. A total of 1385 proteins were obtained when comparing the cultivars Yoshimatsu and Caline IPA-7 and 1306 proteins when comparing the cultivars Hawaii 7996 and Yoshimatsu. Of these, those directly linked to the defense response were selected by gene ontology. Several proteins related to pathogenesis (PR-proteins) that have antimicrobial action were identified, including PR1, PR5, PR10 and PR14; the universal stress protein (PHOs/USP), known to promote resistance to multiple stresses, regulation of ROS homeostasis and regulation of plant growth/development; the annexins, related to the anti-oxidant system and pectinoesterase e xyloglucan endotransglucosylase (XET), both related to the cell wall. Their accumulation, either exclusively or differently in cultivars under stress, broadens the understanding of different strategies of resistance to the pathogen, and can significantly contribute to tomato genetic improvement programs in a process of assisted selection of genotypes resistant to bacterial wilt.
publishDate 2022
dc.date.issued.fl_str_mv 2022-06-30
dc.date.accessioned.fl_str_mv 2024-02-15T21:27:07Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
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dc.identifier.citation.fl_str_mv ARAÚJO, Bianca Galúcio Pereira. Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum. 2022. 105 f. Tese (Programa de Pós-Graduação em Melhoramento Genético de Plantas) - Universidade Federal Rural de Pernambuco, Recife.
dc.identifier.uri.fl_str_mv http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/9502
identifier_str_mv ARAÚJO, Bianca Galúcio Pereira. Prospecção de biomarcadores moleculares de resistência de tomateiro à murcha bacteriana causada pela Ralstonia pseudosolanacearum. 2022. 105 f. Tese (Programa de Pós-Graduação em Melhoramento Genético de Plantas) - Universidade Federal Rural de Pernambuco, Recife.
url http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/9502
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dc.publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Melhoramento Genético de Plantas
dc.publisher.initials.fl_str_mv UFRPE
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Departamento de Agronomia
publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
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