Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Scientia Agrícola (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400016 |
Resumo: | Traditional growers of the Vale do Ribeira, São Paulo State, grow and make use of several D. alata landraces. This study assessed the genetic diversity of 16 landraces, using isozymatic and morphological markers and comparing them with 19 commercial varieties of D. alata. Their distribution in different levels of organization such as households and communities of the Vale do Ribeira was evaluated. Isozymatic analyses were performed with polyacrylamide (six systems) and starch gels (one system), while the morphological analyses were carried out with 24 traits. Due to the polyploid nature of this species, the isozymatic bands were scored as binary data. Morphological traits were also scored as binary data. Principal coordinates and cluster analyses were conducted for both markers, using for the later the Jaccard´s similarity coefficient and UPGMA method. The separation of the landraces from the commercial varieties, which showed lower genetic diversity, was reported for both markers. No correlation between genetic and geographical distances was found for both data, which suggests that the observed variability is not spatially structured. Also, no correlation was found between both markers. The analysis of molecular variance (AMOVA) indicated that genetic diversity was mainly found within households for both isozymatic (54%) and morphological (70%) markers. The results obtained for both markers revealed the importance of traditional agriculturists in the Vale do Ribeira in maintaining high diversity for D. alata, even higher than the varieties commercialized in São Paulo State, contributing for the in situ/on farm conservation of this crop. |
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Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, BrazilAMOVAtraditional agriculturegenetic diversitywater yamTraditional growers of the Vale do Ribeira, São Paulo State, grow and make use of several D. alata landraces. This study assessed the genetic diversity of 16 landraces, using isozymatic and morphological markers and comparing them with 19 commercial varieties of D. alata. Their distribution in different levels of organization such as households and communities of the Vale do Ribeira was evaluated. Isozymatic analyses were performed with polyacrylamide (six systems) and starch gels (one system), while the morphological analyses were carried out with 24 traits. Due to the polyploid nature of this species, the isozymatic bands were scored as binary data. Morphological traits were also scored as binary data. Principal coordinates and cluster analyses were conducted for both markers, using for the later the Jaccard´s similarity coefficient and UPGMA method. The separation of the landraces from the commercial varieties, which showed lower genetic diversity, was reported for both markers. No correlation between genetic and geographical distances was found for both data, which suggests that the observed variability is not spatially structured. Also, no correlation was found between both markers. The analysis of molecular variance (AMOVA) indicated that genetic diversity was mainly found within households for both isozymatic (54%) and morphological (70%) markers. The results obtained for both markers revealed the importance of traditional agriculturists in the Vale do Ribeira in maintaining high diversity for D. alata, even higher than the varieties commercialized in São Paulo State, contributing for the in situ/on farm conservation of this crop.Escola Superior de Agricultura "Luiz de Queiroz"2011-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400016Scientia Agricola v.68 n.4 2011reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USP10.1590/S0103-90162011000400016info:eu-repo/semantics/openAccessBressan,Eduardo de AndradeBriner Neto,ThiagoZucchi,Maria ImaculadaRabello,Ronaldo JoséVeasey,Elizabeth Anneng2011-09-22T00:00:00Zoai:scielo:S0103-90162011000400016Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2011-09-22T00:00Scientia Agrícola (Online) - Universidade de São Paulo (USP)false |
dc.title.none.fl_str_mv |
Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil |
title |
Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil |
spellingShingle |
Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil Bressan,Eduardo de Andrade AMOVA traditional agriculture genetic diversity water yam |
title_short |
Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil |
title_full |
Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil |
title_fullStr |
Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil |
title_full_unstemmed |
Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil |
title_sort |
Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil |
author |
Bressan,Eduardo de Andrade |
author_facet |
Bressan,Eduardo de Andrade Briner Neto,Thiago Zucchi,Maria Imaculada Rabello,Ronaldo José Veasey,Elizabeth Ann |
author_role |
author |
author2 |
Briner Neto,Thiago Zucchi,Maria Imaculada Rabello,Ronaldo José Veasey,Elizabeth Ann |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Bressan,Eduardo de Andrade Briner Neto,Thiago Zucchi,Maria Imaculada Rabello,Ronaldo José Veasey,Elizabeth Ann |
dc.subject.por.fl_str_mv |
AMOVA traditional agriculture genetic diversity water yam |
topic |
AMOVA traditional agriculture genetic diversity water yam |
description |
Traditional growers of the Vale do Ribeira, São Paulo State, grow and make use of several D. alata landraces. This study assessed the genetic diversity of 16 landraces, using isozymatic and morphological markers and comparing them with 19 commercial varieties of D. alata. Their distribution in different levels of organization such as households and communities of the Vale do Ribeira was evaluated. Isozymatic analyses were performed with polyacrylamide (six systems) and starch gels (one system), while the morphological analyses were carried out with 24 traits. Due to the polyploid nature of this species, the isozymatic bands were scored as binary data. Morphological traits were also scored as binary data. Principal coordinates and cluster analyses were conducted for both markers, using for the later the Jaccard´s similarity coefficient and UPGMA method. The separation of the landraces from the commercial varieties, which showed lower genetic diversity, was reported for both markers. No correlation between genetic and geographical distances was found for both data, which suggests that the observed variability is not spatially structured. Also, no correlation was found between both markers. The analysis of molecular variance (AMOVA) indicated that genetic diversity was mainly found within households for both isozymatic (54%) and morphological (70%) markers. The results obtained for both markers revealed the importance of traditional agriculturists in the Vale do Ribeira in maintaining high diversity for D. alata, even higher than the varieties commercialized in São Paulo State, contributing for the in situ/on farm conservation of this crop. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-08-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400016 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400016 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S0103-90162011000400016 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Escola Superior de Agricultura "Luiz de Queiroz" |
publisher.none.fl_str_mv |
Escola Superior de Agricultura "Luiz de Queiroz" |
dc.source.none.fl_str_mv |
Scientia Agricola v.68 n.4 2011 reponame:Scientia Agrícola (Online) instname:Universidade de São Paulo (USP) instacron:USP |
instname_str |
Universidade de São Paulo (USP) |
instacron_str |
USP |
institution |
USP |
reponame_str |
Scientia Agrícola (Online) |
collection |
Scientia Agrícola (Online) |
repository.name.fl_str_mv |
Scientia Agrícola (Online) - Universidade de São Paulo (USP) |
repository.mail.fl_str_mv |
scientia@usp.br||alleoni@usp.br |
_version_ |
1748936462476247040 |