Impact of Amazon land use on the community of soil fungi

Detalhes bibliográficos
Autor(a) principal: Fracetto, Giselle G. M.
Data de Publicação: 2013
Outros Autores: Azevedo, Lucas C.B., Fracetto, Felipe J. C., Andreote, Fernando D., Lambais, Marcio R., Pfenning, Ludwig H.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: https://www.revistas.usp.br/sa/article/view/52984
Resumo: Considered as one of the most biodiverse biomes, the Amazon has a featured role in the discovery of new species of plants, animals and microorganisms, which may be important for the functionality of different ecosystems. However, studies on the impacts resulted from changes in the Amazon land use on microbial communities and their functions are still limited. In this context, the soil fungal diversity can act as an important indicator of environmental stress caused by land use of the Amazon. This study describes changes in soil fungal communities caused by different systems of land use (primary forest, secondary forest, agroforestry, agriculture and pasture). Communities were observed in each of the areas using denaturing gradient gel electrophoresis (DGGE) of 18S rRNA gene combined with the non-metric multidimensional scaling (NMDS). Unique bands indicated the dominance of particular fungal groups in each of the specific treatments, mainly in areas converted to pasture, which differed greatly from samples of other systems of land use (SLU). The analysis of partial sequence of the 18S rRNA gene of fungi in soils under primary forest, agriculture and pasture showed differences (p = 0.001), evidencing the fungal community response to such changes. Most abundant phyla were the Zygomycota in the soil under primary forest and agricultural land, and Basidiomycota in the soil under pasture. The results show that the Amazon soil is an ecosystem susceptible to environmental changes in regarding the fungi community inhabiting this niche.
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spelling Impact of Amazon land use on the community of soil fungi DGGE18S rRNAfungal diversitysoil biology Considered as one of the most biodiverse biomes, the Amazon has a featured role in the discovery of new species of plants, animals and microorganisms, which may be important for the functionality of different ecosystems. However, studies on the impacts resulted from changes in the Amazon land use on microbial communities and their functions are still limited. In this context, the soil fungal diversity can act as an important indicator of environmental stress caused by land use of the Amazon. This study describes changes in soil fungal communities caused by different systems of land use (primary forest, secondary forest, agroforestry, agriculture and pasture). Communities were observed in each of the areas using denaturing gradient gel electrophoresis (DGGE) of 18S rRNA gene combined with the non-metric multidimensional scaling (NMDS). Unique bands indicated the dominance of particular fungal groups in each of the specific treatments, mainly in areas converted to pasture, which differed greatly from samples of other systems of land use (SLU). The analysis of partial sequence of the 18S rRNA gene of fungi in soils under primary forest, agriculture and pasture showed differences (p = 0.001), evidencing the fungal community response to such changes. Most abundant phyla were the Zygomycota in the soil under primary forest and agricultural land, and Basidiomycota in the soil under pasture. The results show that the Amazon soil is an ecosystem susceptible to environmental changes in regarding the fungi community inhabiting this niche. Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz2013-04-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/sa/article/view/5298410.1590/S0103-90162013000200001Scientia Agricola; v. 70 n. 2 (2013); 59-67Scientia Agricola; Vol. 70 Núm. 2 (2013); 59-67Scientia Agricola; Vol. 70 No. 2 (2013); 59-671678-992X0103-9016reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USPenghttps://www.revistas.usp.br/sa/article/view/52984/57040Copyright (c) 2015 Scientia Agricolainfo:eu-repo/semantics/openAccessFracetto, Giselle G. M.Azevedo, Lucas C.B.Fracetto, Felipe J. C.Andreote, Fernando D.Lambais, Marcio R.Pfenning, Ludwig H.2015-07-07T19:19:11Zoai:revistas.usp.br:article/52984Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2015-07-07T19:19:11Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Impact of Amazon land use on the community of soil fungi
title Impact of Amazon land use on the community of soil fungi
spellingShingle Impact of Amazon land use on the community of soil fungi
Fracetto, Giselle G. M.
DGGE
18S rRNA
fungal diversity
soil biology
title_short Impact of Amazon land use on the community of soil fungi
title_full Impact of Amazon land use on the community of soil fungi
title_fullStr Impact of Amazon land use on the community of soil fungi
title_full_unstemmed Impact of Amazon land use on the community of soil fungi
title_sort Impact of Amazon land use on the community of soil fungi
author Fracetto, Giselle G. M.
author_facet Fracetto, Giselle G. M.
Azevedo, Lucas C.B.
Fracetto, Felipe J. C.
Andreote, Fernando D.
Lambais, Marcio R.
Pfenning, Ludwig H.
author_role author
author2 Azevedo, Lucas C.B.
Fracetto, Felipe J. C.
Andreote, Fernando D.
Lambais, Marcio R.
Pfenning, Ludwig H.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Fracetto, Giselle G. M.
Azevedo, Lucas C.B.
Fracetto, Felipe J. C.
Andreote, Fernando D.
Lambais, Marcio R.
Pfenning, Ludwig H.
dc.subject.por.fl_str_mv DGGE
18S rRNA
fungal diversity
soil biology
topic DGGE
18S rRNA
fungal diversity
soil biology
description Considered as one of the most biodiverse biomes, the Amazon has a featured role in the discovery of new species of plants, animals and microorganisms, which may be important for the functionality of different ecosystems. However, studies on the impacts resulted from changes in the Amazon land use on microbial communities and their functions are still limited. In this context, the soil fungal diversity can act as an important indicator of environmental stress caused by land use of the Amazon. This study describes changes in soil fungal communities caused by different systems of land use (primary forest, secondary forest, agroforestry, agriculture and pasture). Communities were observed in each of the areas using denaturing gradient gel electrophoresis (DGGE) of 18S rRNA gene combined with the non-metric multidimensional scaling (NMDS). Unique bands indicated the dominance of particular fungal groups in each of the specific treatments, mainly in areas converted to pasture, which differed greatly from samples of other systems of land use (SLU). The analysis of partial sequence of the 18S rRNA gene of fungi in soils under primary forest, agriculture and pasture showed differences (p = 0.001), evidencing the fungal community response to such changes. Most abundant phyla were the Zygomycota in the soil under primary forest and agricultural land, and Basidiomycota in the soil under pasture. The results show that the Amazon soil is an ecosystem susceptible to environmental changes in regarding the fungi community inhabiting this niche.
publishDate 2013
dc.date.none.fl_str_mv 2013-04-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/sa/article/view/52984
10.1590/S0103-90162013000200001
url https://www.revistas.usp.br/sa/article/view/52984
identifier_str_mv 10.1590/S0103-90162013000200001
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/sa/article/view/52984/57040
dc.rights.driver.fl_str_mv Copyright (c) 2015 Scientia Agricola
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2015 Scientia Agricola
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz
publisher.none.fl_str_mv Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz
dc.source.none.fl_str_mv Scientia Agricola; v. 70 n. 2 (2013); 59-67
Scientia Agricola; Vol. 70 Núm. 2 (2013); 59-67
Scientia Agricola; Vol. 70 No. 2 (2013); 59-67
1678-992X
0103-9016
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
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