Quantitative trait locus mapping associated with earliness and fruit weight in tomato

Detalhes bibliográficos
Autor(a) principal: Hernández-Bautista,Aurelio
Data de Publicação: 2016
Outros Autores: Lobato-Ortiz,Ricardo, García-Zavala,José Jesús, López-Fortoso,Fernando, Cruz-Izquierdo,Serafín, Chávez-Servia,José Luis, Cadeza-Espinosa,Marisol
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162016000500478
Resumo: ABSTRACT The flowering time is regarded as an important factor that affects yield in various crops. In order to understand how the molecular basis controlling main components of earliness in tomato (Solanum lycopersicum L.), and to deduce whether the correlation between fruit weight, days to flowering and seed weight, is caused by pleiotropic effects or genetic linkage, a QTLs analysis was carried out using an F2 interspecific population derived from the cross of S. lycopersicum and S. pimpinellifolium. The analysis revealed that most of the components related to earliness were independent due to the absence of phenotypic correlation and lack of co-localization of their QTLs. QTLs affecting the flowering time showed considerable variation over time in values of explained phenotypic variation and average effects, which suggested dominance becomes more evident over time. The path analysis showed that traits such as days to flowering, seed weight, and length of the first leaf had a significant effect on the expression of fruit weight, confirming that their correlations were due to linkage. This result was also confirmed in two genomic regions located on chromosomes 1 and 4, where despite showing high co-localization of QTLs associated to days to flowering, seed weight and fruit weight, the presence and absence of epistasis in dfft1.1 × dftt4.1 and fw1.1 × fw4.1, suggested that the linkage was the main cause of the co-localization.
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spelling Quantitative trait locus mapping associated with earliness and fruit weight in tomatoSolanum lycopersicumQTLsepistasisdays to floweringpath analysisABSTRACT The flowering time is regarded as an important factor that affects yield in various crops. In order to understand how the molecular basis controlling main components of earliness in tomato (Solanum lycopersicum L.), and to deduce whether the correlation between fruit weight, days to flowering and seed weight, is caused by pleiotropic effects or genetic linkage, a QTLs analysis was carried out using an F2 interspecific population derived from the cross of S. lycopersicum and S. pimpinellifolium. The analysis revealed that most of the components related to earliness were independent due to the absence of phenotypic correlation and lack of co-localization of their QTLs. QTLs affecting the flowering time showed considerable variation over time in values of explained phenotypic variation and average effects, which suggested dominance becomes more evident over time. The path analysis showed that traits such as days to flowering, seed weight, and length of the first leaf had a significant effect on the expression of fruit weight, confirming that their correlations were due to linkage. This result was also confirmed in two genomic regions located on chromosomes 1 and 4, where despite showing high co-localization of QTLs associated to days to flowering, seed weight and fruit weight, the presence and absence of epistasis in dfft1.1 × dftt4.1 and fw1.1 × fw4.1, suggested that the linkage was the main cause of the co-localization.Escola Superior de Agricultura "Luiz de Queiroz"2016-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162016000500478Scientia Agricola v.73 n.5 2016reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USP10.1590/0103-9016-2015-0245info:eu-repo/semantics/openAccessHernández-Bautista,AurelioLobato-Ortiz,RicardoGarcía-Zavala,José JesúsLópez-Fortoso,FernandoCruz-Izquierdo,SerafínChávez-Servia,José LuisCadeza-Espinosa,Marisoleng2016-08-16T00:00:00Zoai:scielo:S0103-90162016000500478Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2016-08-16T00:00Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Quantitative trait locus mapping associated with earliness and fruit weight in tomato
title Quantitative trait locus mapping associated with earliness and fruit weight in tomato
spellingShingle Quantitative trait locus mapping associated with earliness and fruit weight in tomato
Hernández-Bautista,Aurelio
Solanum lycopersicum
QTLs
epistasis
days to flowering
path analysis
title_short Quantitative trait locus mapping associated with earliness and fruit weight in tomato
title_full Quantitative trait locus mapping associated with earliness and fruit weight in tomato
title_fullStr Quantitative trait locus mapping associated with earliness and fruit weight in tomato
title_full_unstemmed Quantitative trait locus mapping associated with earliness and fruit weight in tomato
title_sort Quantitative trait locus mapping associated with earliness and fruit weight in tomato
author Hernández-Bautista,Aurelio
author_facet Hernández-Bautista,Aurelio
Lobato-Ortiz,Ricardo
García-Zavala,José Jesús
López-Fortoso,Fernando
Cruz-Izquierdo,Serafín
Chávez-Servia,José Luis
Cadeza-Espinosa,Marisol
author_role author
author2 Lobato-Ortiz,Ricardo
García-Zavala,José Jesús
López-Fortoso,Fernando
Cruz-Izquierdo,Serafín
Chávez-Servia,José Luis
Cadeza-Espinosa,Marisol
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Hernández-Bautista,Aurelio
Lobato-Ortiz,Ricardo
García-Zavala,José Jesús
López-Fortoso,Fernando
Cruz-Izquierdo,Serafín
Chávez-Servia,José Luis
Cadeza-Espinosa,Marisol
dc.subject.por.fl_str_mv Solanum lycopersicum
QTLs
epistasis
days to flowering
path analysis
topic Solanum lycopersicum
QTLs
epistasis
days to flowering
path analysis
description ABSTRACT The flowering time is regarded as an important factor that affects yield in various crops. In order to understand how the molecular basis controlling main components of earliness in tomato (Solanum lycopersicum L.), and to deduce whether the correlation between fruit weight, days to flowering and seed weight, is caused by pleiotropic effects or genetic linkage, a QTLs analysis was carried out using an F2 interspecific population derived from the cross of S. lycopersicum and S. pimpinellifolium. The analysis revealed that most of the components related to earliness were independent due to the absence of phenotypic correlation and lack of co-localization of their QTLs. QTLs affecting the flowering time showed considerable variation over time in values of explained phenotypic variation and average effects, which suggested dominance becomes more evident over time. The path analysis showed that traits such as days to flowering, seed weight, and length of the first leaf had a significant effect on the expression of fruit weight, confirming that their correlations were due to linkage. This result was also confirmed in two genomic regions located on chromosomes 1 and 4, where despite showing high co-localization of QTLs associated to days to flowering, seed weight and fruit weight, the presence and absence of epistasis in dfft1.1 × dftt4.1 and fw1.1 × fw4.1, suggested that the linkage was the main cause of the co-localization.
publishDate 2016
dc.date.none.fl_str_mv 2016-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162016000500478
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162016000500478
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0103-9016-2015-0245
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
dc.source.none.fl_str_mv Scientia Agricola v.73 n.5 2016
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
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