Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Scientia Agrícola (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000300006 |
Resumo: | Monitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations. |
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oai:scielo:S0103-90162011000300006 |
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Scientia Agrícola (Online) |
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Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, BrazilPiaractus mesopotamicusgenetic variabilityhatchery stationsmolecular markersMonitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations.Escola Superior de Agricultura "Luiz de Queiroz"2011-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000300006Scientia Agricola v.68 n.3 2011reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USP10.1590/S0103-90162011000300006info:eu-repo/semantics/openAccessPovh,Jayme AparecidoRibeiro,Ricardo PereiraLopera-Barrero,Nelson MauricioJacometo,Carolina BespalhokVargas,LauroGomes,Patrícia CristinaLopes,Taís da Silvaeng2011-07-11T00:00:00Zoai:scielo:S0103-90162011000300006Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2011-07-11T00:00Scientia Agrícola (Online) - Universidade de São Paulo (USP)false |
dc.title.none.fl_str_mv |
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil |
title |
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil |
spellingShingle |
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil Povh,Jayme Aparecido Piaractus mesopotamicus genetic variability hatchery stations molecular markers |
title_short |
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil |
title_full |
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil |
title_fullStr |
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil |
title_full_unstemmed |
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil |
title_sort |
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil |
author |
Povh,Jayme Aparecido |
author_facet |
Povh,Jayme Aparecido Ribeiro,Ricardo Pereira Lopera-Barrero,Nelson Mauricio Jacometo,Carolina Bespalhok Vargas,Lauro Gomes,Patrícia Cristina Lopes,Taís da Silva |
author_role |
author |
author2 |
Ribeiro,Ricardo Pereira Lopera-Barrero,Nelson Mauricio Jacometo,Carolina Bespalhok Vargas,Lauro Gomes,Patrícia Cristina Lopes,Taís da Silva |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Povh,Jayme Aparecido Ribeiro,Ricardo Pereira Lopera-Barrero,Nelson Mauricio Jacometo,Carolina Bespalhok Vargas,Lauro Gomes,Patrícia Cristina Lopes,Taís da Silva |
dc.subject.por.fl_str_mv |
Piaractus mesopotamicus genetic variability hatchery stations molecular markers |
topic |
Piaractus mesopotamicus genetic variability hatchery stations molecular markers |
description |
Monitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-06-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000300006 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000300006 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S0103-90162011000300006 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Escola Superior de Agricultura "Luiz de Queiroz" |
publisher.none.fl_str_mv |
Escola Superior de Agricultura "Luiz de Queiroz" |
dc.source.none.fl_str_mv |
Scientia Agricola v.68 n.3 2011 reponame:Scientia Agrícola (Online) instname:Universidade de São Paulo (USP) instacron:USP |
instname_str |
Universidade de São Paulo (USP) |
instacron_str |
USP |
institution |
USP |
reponame_str |
Scientia Agrícola (Online) |
collection |
Scientia Agrícola (Online) |
repository.name.fl_str_mv |
Scientia Agrícola (Online) - Universidade de São Paulo (USP) |
repository.mail.fl_str_mv |
scientia@usp.br||alleoni@usp.br |
_version_ |
1748936462429061120 |