Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms

Detalhes bibliográficos
Autor(a) principal: Matsushita, Felipe Yu
Data de Publicação: 2022
Outros Autores: Krebs, Vera Lúcia Jornada, Carvalho, Werther Brunow de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Clinics
Texto Completo: https://www.revistas.usp.br/clinics/article/view/213656
Resumo: Purpose: The authors aimed to develop a Machine-Learning (ML) algorithm that can predict positive blood culture in the neonatal intensive care unit, using complete blood count and C-reactive protein values. Methods: The study was based on patients’ electronic health records at a tertiary neonatal intensive care unit in São Paulo, Brazil. All blood cultures that had paired complete blood count and C-reactive protein measurements taken at the same time were included. To evaluate the machine learning model's performance, the authors used accuracy, Area Under the Receiver Operating Characteristics (AUROC), recall, precision, and F1-score. Results: The dataset included 1181 blood cultures with paired complete blood count plus c-reactive protein and 1911 blood cultures with paired complete blood count only. The f1-score ranged from 0.14 to 0.43, recall ranged from 0.08 to 0.59, precision ranged from 0.29 to 1.00, and accuracy ranged from 0.688 to 0.864. Conclusion: Complete blood count parameters and C-reactive protein levels cannot be used in ML models to predict bacteremia in newborns.
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spelling Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithmsCritical careNeonatologyArtificial intelligenceMachine learningSepsisPurpose: The authors aimed to develop a Machine-Learning (ML) algorithm that can predict positive blood culture in the neonatal intensive care unit, using complete blood count and C-reactive protein values. Methods: The study was based on patients’ electronic health records at a tertiary neonatal intensive care unit in São Paulo, Brazil. All blood cultures that had paired complete blood count and C-reactive protein measurements taken at the same time were included. To evaluate the machine learning model's performance, the authors used accuracy, Area Under the Receiver Operating Characteristics (AUROC), recall, precision, and F1-score. Results: The dataset included 1181 blood cultures with paired complete blood count plus c-reactive protein and 1911 blood cultures with paired complete blood count only. The f1-score ranged from 0.14 to 0.43, recall ranged from 0.08 to 0.59, precision ranged from 0.29 to 1.00, and accuracy ranged from 0.688 to 0.864. Conclusion: Complete blood count parameters and C-reactive protein levels cannot be used in ML models to predict bacteremia in newborns.Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo2022-12-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/clinics/article/view/21365610.1016/j.clinsp.2022.100148Clinics; Vol. 78 (2023); 100148Clinics; v. 78 (2023); 100148Clinics; Vol. 78 (2023); 1001481980-53221807-5932reponame:Clinicsinstname:Universidade de São Paulo (USP)instacron:USPenghttps://www.revistas.usp.br/clinics/article/view/213656/195758Copyright (c) 2023 Clinicsinfo:eu-repo/semantics/openAccessMatsushita, Felipe YuKrebs, Vera Lúcia JornadaCarvalho, Werther Brunow de2023-07-06T13:05:37Zoai:revistas.usp.br:article/213656Revistahttps://www.revistas.usp.br/clinicsPUBhttps://www.revistas.usp.br/clinics/oai||clinics@hc.fm.usp.br1980-53221807-5932opendoar:2023-07-06T13:05:37Clinics - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms
title Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms
spellingShingle Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms
Matsushita, Felipe Yu
Critical care
Neonatology
Artificial intelligence
Machine learning
Sepsis
title_short Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms
title_full Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms
title_fullStr Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms
title_full_unstemmed Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms
title_sort Complete blood count and C-reactive protein to predict positive blood culture among neonates using machine learning algorithms
author Matsushita, Felipe Yu
author_facet Matsushita, Felipe Yu
Krebs, Vera Lúcia Jornada
Carvalho, Werther Brunow de
author_role author
author2 Krebs, Vera Lúcia Jornada
Carvalho, Werther Brunow de
author2_role author
author
dc.contributor.author.fl_str_mv Matsushita, Felipe Yu
Krebs, Vera Lúcia Jornada
Carvalho, Werther Brunow de
dc.subject.por.fl_str_mv Critical care
Neonatology
Artificial intelligence
Machine learning
Sepsis
topic Critical care
Neonatology
Artificial intelligence
Machine learning
Sepsis
description Purpose: The authors aimed to develop a Machine-Learning (ML) algorithm that can predict positive blood culture in the neonatal intensive care unit, using complete blood count and C-reactive protein values. Methods: The study was based on patients’ electronic health records at a tertiary neonatal intensive care unit in São Paulo, Brazil. All blood cultures that had paired complete blood count and C-reactive protein measurements taken at the same time were included. To evaluate the machine learning model's performance, the authors used accuracy, Area Under the Receiver Operating Characteristics (AUROC), recall, precision, and F1-score. Results: The dataset included 1181 blood cultures with paired complete blood count plus c-reactive protein and 1911 blood cultures with paired complete blood count only. The f1-score ranged from 0.14 to 0.43, recall ranged from 0.08 to 0.59, precision ranged from 0.29 to 1.00, and accuracy ranged from 0.688 to 0.864. Conclusion: Complete blood count parameters and C-reactive protein levels cannot be used in ML models to predict bacteremia in newborns.
publishDate 2022
dc.date.none.fl_str_mv 2022-12-08
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/clinics/article/view/213656
10.1016/j.clinsp.2022.100148
url https://www.revistas.usp.br/clinics/article/view/213656
identifier_str_mv 10.1016/j.clinsp.2022.100148
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/clinics/article/view/213656/195758
dc.rights.driver.fl_str_mv Copyright (c) 2023 Clinics
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2023 Clinics
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo
publisher.none.fl_str_mv Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo
dc.source.none.fl_str_mv Clinics; Vol. 78 (2023); 100148
Clinics; v. 78 (2023); 100148
Clinics; Vol. 78 (2023); 100148
1980-5322
1807-5932
reponame:Clinics
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Clinics
collection Clinics
repository.name.fl_str_mv Clinics - Universidade de São Paulo (USP)
repository.mail.fl_str_mv ||clinics@hc.fm.usp.br
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