Frequency of genetic polymorphisms of PXR gene in the Brazilian population

Detalhes bibliográficos
Autor(a) principal: Moreira, Ricardo P. P.
Data de Publicação: 2011
Outros Autores: Jorge, Alexander A. L., Mendonca, Berenice B., Bachega, Tânia A. S. S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Clinics
Texto Completo: https://www.revistas.usp.br/clinics/article/view/19524
Resumo: INTRODUCTION: PXR polymorphisms have been implicated in modulating CYP3A4 and PXR expression, potentially accounting for interindividual differences in drug metabolism. The prevalence of PXR polymorphisms varies among ethnic groups and data on the allelic distribution in the highly mixed Brazilian population is lacking. The aim of this study was to analyze genetic variations in the PXR gene in Brazilians and to compare the results to other ethnic groups. METHODS: DNA samples from 117 healthy Brazilians underwent PCR amplification and sequencing. RESULTS: Eleven polymorphisms were identified, 3 of which are highly associated with differences in CYP3A4 expression. We also identified 1 new synonymous variant in 1.3% of the alleles. Among the functional polymorphisms, -25913 C&gt;T and -6994T&gt;C occurred at a higher frequency comparedtothe Africanalleles (p < 0.05) but at a lower frequency compared to Caucasian alleles. The 8055 C&gt;T allele was found at a similar frequency to those described in Caucasians and Africans (p &gt; 0.05). CONCLUSION: We observed that functional variants of the PXR were frequent in our sample of the Brazilian population. Our results suggest that PXR gene variants may be of interest in pharmacogenetic studies involving Brazilians.
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spelling Frequency of genetic polymorphisms of PXR gene in the Brazilian population PharmacogeneticsAllelic distributionBrazilian populationGenetic variation INTRODUCTION: PXR polymorphisms have been implicated in modulating CYP3A4 and PXR expression, potentially accounting for interindividual differences in drug metabolism. The prevalence of PXR polymorphisms varies among ethnic groups and data on the allelic distribution in the highly mixed Brazilian population is lacking. The aim of this study was to analyze genetic variations in the PXR gene in Brazilians and to compare the results to other ethnic groups. METHODS: DNA samples from 117 healthy Brazilians underwent PCR amplification and sequencing. RESULTS: Eleven polymorphisms were identified, 3 of which are highly associated with differences in CYP3A4 expression. We also identified 1 new synonymous variant in 1.3% of the alleles. Among the functional polymorphisms, -25913 C&gt;T and -6994T&gt;C occurred at a higher frequency comparedtothe Africanalleles (p < 0.05) but at a lower frequency compared to Caucasian alleles. The 8055 C&gt;T allele was found at a similar frequency to those described in Caucasians and Africans (p &gt; 0.05). CONCLUSION: We observed that functional variants of the PXR were frequent in our sample of the Brazilian population. Our results suggest that PXR gene variants may be of interest in pharmacogenetic studies involving Brazilians. Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo2011-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/clinics/article/view/1952410.1590/S1807-59322011000600020Clinics; Vol. 66 No. 6 (2011); 1041-1044 Clinics; v. 66 n. 6 (2011); 1041-1044 Clinics; Vol. 66 Núm. 6 (2011); 1041-1044 1980-53221807-5932reponame:Clinicsinstname:Universidade de São Paulo (USP)instacron:USPenghttps://www.revistas.usp.br/clinics/article/view/19524/21587Moreira, Ricardo P. P.Jorge, Alexander A. L.Mendonca, Berenice B.Bachega, Tânia A. S. S.info:eu-repo/semantics/openAccess2012-05-23T16:46:37Zoai:revistas.usp.br:article/19524Revistahttps://www.revistas.usp.br/clinicsPUBhttps://www.revistas.usp.br/clinics/oai||clinics@hc.fm.usp.br1980-53221807-5932opendoar:2012-05-23T16:46:37Clinics - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Frequency of genetic polymorphisms of PXR gene in the Brazilian population
title Frequency of genetic polymorphisms of PXR gene in the Brazilian population
spellingShingle Frequency of genetic polymorphisms of PXR gene in the Brazilian population
Moreira, Ricardo P. P.
Pharmacogenetics
Allelic distribution
Brazilian population
Genetic variation
title_short Frequency of genetic polymorphisms of PXR gene in the Brazilian population
title_full Frequency of genetic polymorphisms of PXR gene in the Brazilian population
title_fullStr Frequency of genetic polymorphisms of PXR gene in the Brazilian population
title_full_unstemmed Frequency of genetic polymorphisms of PXR gene in the Brazilian population
title_sort Frequency of genetic polymorphisms of PXR gene in the Brazilian population
author Moreira, Ricardo P. P.
author_facet Moreira, Ricardo P. P.
Jorge, Alexander A. L.
Mendonca, Berenice B.
Bachega, Tânia A. S. S.
author_role author
author2 Jorge, Alexander A. L.
Mendonca, Berenice B.
Bachega, Tânia A. S. S.
author2_role author
author
author
dc.contributor.author.fl_str_mv Moreira, Ricardo P. P.
Jorge, Alexander A. L.
Mendonca, Berenice B.
Bachega, Tânia A. S. S.
dc.subject.por.fl_str_mv Pharmacogenetics
Allelic distribution
Brazilian population
Genetic variation
topic Pharmacogenetics
Allelic distribution
Brazilian population
Genetic variation
description INTRODUCTION: PXR polymorphisms have been implicated in modulating CYP3A4 and PXR expression, potentially accounting for interindividual differences in drug metabolism. The prevalence of PXR polymorphisms varies among ethnic groups and data on the allelic distribution in the highly mixed Brazilian population is lacking. The aim of this study was to analyze genetic variations in the PXR gene in Brazilians and to compare the results to other ethnic groups. METHODS: DNA samples from 117 healthy Brazilians underwent PCR amplification and sequencing. RESULTS: Eleven polymorphisms were identified, 3 of which are highly associated with differences in CYP3A4 expression. We also identified 1 new synonymous variant in 1.3% of the alleles. Among the functional polymorphisms, -25913 C&gt;T and -6994T&gt;C occurred at a higher frequency comparedtothe Africanalleles (p < 0.05) but at a lower frequency compared to Caucasian alleles. The 8055 C&gt;T allele was found at a similar frequency to those described in Caucasians and Africans (p &gt; 0.05). CONCLUSION: We observed that functional variants of the PXR were frequent in our sample of the Brazilian population. Our results suggest that PXR gene variants may be of interest in pharmacogenetic studies involving Brazilians.
publishDate 2011
dc.date.none.fl_str_mv 2011-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/clinics/article/view/19524
10.1590/S1807-59322011000600020
url https://www.revistas.usp.br/clinics/article/view/19524
identifier_str_mv 10.1590/S1807-59322011000600020
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/clinics/article/view/19524/21587
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo
publisher.none.fl_str_mv Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo
dc.source.none.fl_str_mv Clinics; Vol. 66 No. 6 (2011); 1041-1044
Clinics; v. 66 n. 6 (2011); 1041-1044
Clinics; Vol. 66 Núm. 6 (2011); 1041-1044
1980-5322
1807-5932
reponame:Clinics
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Clinics
collection Clinics
repository.name.fl_str_mv Clinics - Universidade de São Paulo (USP)
repository.mail.fl_str_mv ||clinics@hc.fm.usp.br
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