Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.

Detalhes bibliográficos
Autor(a) principal: CABRAL, P. G. C.
Data de Publicação: 2016
Outros Autores: MACIEL-ZAMBOLIM, E., OLIVEIRA, S. A. S. de, CAIXETA, E. T., ZAMBOLIM, L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041410
Resumo: Coffee leaf rust is the most limiting disease for coffee cultivation in Brazil. Despite its importance, relatively little is known about the genetic diversity of Hemileia vastatrix, the rust causal agent. In this work, the DNA from 112 monopustule isolates from different geographic locations and coffee genotypes were analysed by amplified fragment length polymorphisms (AFLP). The objectives were to assess the influence of the host and geographic origin on the diversity and population differentiation in H. vastatrix. The fungal population showed a low level of genotypic diversity. Gene diversity (h) was 0027 and the hypothesis of random mating in the total population was rejected, but evidence for recombination was found for two subpopulations (São Paulo and Parana). The analysis of molecular variance revealed that 90% of the genetic distribution of the pathogen occurs among isolates within the subpopulation (states or host of origin). There was no correlation between geographic and genetic distance (r = 0024, P = 074), which together with the high number of migrants and the low degree of differentiation in populations of H. vastatrix, is consistent with the fact that the inoculum is probably easily dispersed by wind over long distances, allowing dispersal of the pathogen among coffee growing areas in Brazil. Therefore, it is difficult to predict the durability of resistant sources to coffee rust. The recommendation for the breeding programmes is thus to incorporate multigenic resistance as a control strategy.
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spelling Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.CaféVariação genéticaCoffeaCoffee leaf rust is the most limiting disease for coffee cultivation in Brazil. Despite its importance, relatively little is known about the genetic diversity of Hemileia vastatrix, the rust causal agent. In this work, the DNA from 112 monopustule isolates from different geographic locations and coffee genotypes were analysed by amplified fragment length polymorphisms (AFLP). The objectives were to assess the influence of the host and geographic origin on the diversity and population differentiation in H. vastatrix. The fungal population showed a low level of genotypic diversity. Gene diversity (h) was 0027 and the hypothesis of random mating in the total population was rejected, but evidence for recombination was found for two subpopulations (São Paulo and Parana). The analysis of molecular variance revealed that 90% of the genetic distribution of the pathogen occurs among isolates within the subpopulation (states or host of origin). There was no correlation between geographic and genetic distance (r = 0024, P = 074), which together with the high number of migrants and the low degree of differentiation in populations of H. vastatrix, is consistent with the fact that the inoculum is probably easily dispersed by wind over long distances, allowing dispersal of the pathogen among coffee growing areas in Brazil. Therefore, it is difficult to predict the durability of resistant sources to coffee rust. The recommendation for the breeding programmes is thus to incorporate multigenic resistance as a control strategy.P. G. C. CABRAL, UFV; E. MACIEL-ZAMBOLIM, UFV; SAULO ALVES SANTOS DE OLIVEIRA, CNPMF; EVELINE TEIXEIRA CAIXETA, SAPC; L. ZAMBOLIM, UFV.CABRAL, P. G. C.MACIEL-ZAMBOLIM, E.OLIVEIRA, S. A. S. deCAIXETA, E. T.ZAMBOLIM, L.2016-03-18T11:11:11Z2016-03-18T11:11:11Z2016-03-1820162016-03-18T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePlant Pathology, v. 65, n. 2, p.196-204, Feb, 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/104141010.1111/ppa.12411enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T02:44:39Zoai:www.alice.cnptia.embrapa.br:doc/1041410Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T02:44:39falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T02:44:39Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.
title Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.
spellingShingle Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.
CABRAL, P. G. C.
Café
Variação genética
Coffea
title_short Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.
title_full Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.
title_fullStr Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.
title_full_unstemmed Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.
title_sort Genetic diversity and structure of Hemileia vastatrix populations on Coffea spp.
author CABRAL, P. G. C.
author_facet CABRAL, P. G. C.
MACIEL-ZAMBOLIM, E.
OLIVEIRA, S. A. S. de
CAIXETA, E. T.
ZAMBOLIM, L.
author_role author
author2 MACIEL-ZAMBOLIM, E.
OLIVEIRA, S. A. S. de
CAIXETA, E. T.
ZAMBOLIM, L.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv P. G. C. CABRAL, UFV; E. MACIEL-ZAMBOLIM, UFV; SAULO ALVES SANTOS DE OLIVEIRA, CNPMF; EVELINE TEIXEIRA CAIXETA, SAPC; L. ZAMBOLIM, UFV.
dc.contributor.author.fl_str_mv CABRAL, P. G. C.
MACIEL-ZAMBOLIM, E.
OLIVEIRA, S. A. S. de
CAIXETA, E. T.
ZAMBOLIM, L.
dc.subject.por.fl_str_mv Café
Variação genética
Coffea
topic Café
Variação genética
Coffea
description Coffee leaf rust is the most limiting disease for coffee cultivation in Brazil. Despite its importance, relatively little is known about the genetic diversity of Hemileia vastatrix, the rust causal agent. In this work, the DNA from 112 monopustule isolates from different geographic locations and coffee genotypes were analysed by amplified fragment length polymorphisms (AFLP). The objectives were to assess the influence of the host and geographic origin on the diversity and population differentiation in H. vastatrix. The fungal population showed a low level of genotypic diversity. Gene diversity (h) was 0027 and the hypothesis of random mating in the total population was rejected, but evidence for recombination was found for two subpopulations (São Paulo and Parana). The analysis of molecular variance revealed that 90% of the genetic distribution of the pathogen occurs among isolates within the subpopulation (states or host of origin). There was no correlation between geographic and genetic distance (r = 0024, P = 074), which together with the high number of migrants and the low degree of differentiation in populations of H. vastatrix, is consistent with the fact that the inoculum is probably easily dispersed by wind over long distances, allowing dispersal of the pathogen among coffee growing areas in Brazil. Therefore, it is difficult to predict the durability of resistant sources to coffee rust. The recommendation for the breeding programmes is thus to incorporate multigenic resistance as a control strategy.
publishDate 2016
dc.date.none.fl_str_mv 2016-03-18T11:11:11Z
2016-03-18T11:11:11Z
2016-03-18
2016
2016-03-18T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Plant Pathology, v. 65, n. 2, p.196-204, Feb, 2016.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041410
10.1111/ppa.12411
identifier_str_mv Plant Pathology, v. 65, n. 2, p.196-204, Feb, 2016.
10.1111/ppa.12411
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041410
dc.language.iso.fl_str_mv eng
language eng
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instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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