Morphological and molecular diversity among cassava genotypes.

Detalhes bibliográficos
Autor(a) principal: MEZETTE, T. F.
Data de Publicação: 2013
Outros Autores: BLUMER, C. G., VEASEY, E. A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/963983
Resumo: The objective of this work was to characterize morphologically and molecularly the genetic diversity of cassava accessions, collected from different regions in Brazil. A descriptive analysis was made for 12 morphological traits in 419 accessions. Data was transformed into binary data for cluster analysis and analysis of molecular variance. A higher proportion of white or cream (71%) root cortex color was found, while flesh colors were predominantly white (49%) and cream (42%). Four accession groups were classified by the cluster analysis, but they were not grouped according to their origin, which indicates that diversity is not structured in space. The variation was greater within regions (95.6%). Sixty genotypes were also evaluated using 14 polymorphic microsatellite markers. Molecular results corroborated the morphological ones, showing the same random distribution of genotypes, with no grouping according to origin. Diversity indices were high for each region, and a greater diversity was found within regions, with: a mean number of alleles per locus of 3.530; observed and expected heterozygosity of 0.499 and 0.642, respectively; and Shannon index of 1.03. The absence of spatial structure among cassava genotypes according to their origins shows the anthropic influence in the distribution and movement of germplasm, both within and among regions.
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spelling Morphological and molecular diversity among cassava genotypes.Diversidade genéticaMicrossatéliteMorphological traitsGenetic diversityMicrosatellitesGermoplasmaManihot EsculentaGermplasmGenetic variationThe objective of this work was to characterize morphologically and molecularly the genetic diversity of cassava accessions, collected from different regions in Brazil. A descriptive analysis was made for 12 morphological traits in 419 accessions. Data was transformed into binary data for cluster analysis and analysis of molecular variance. A higher proportion of white or cream (71%) root cortex color was found, while flesh colors were predominantly white (49%) and cream (42%). Four accession groups were classified by the cluster analysis, but they were not grouped according to their origin, which indicates that diversity is not structured in space. The variation was greater within regions (95.6%). Sixty genotypes were also evaluated using 14 polymorphic microsatellite markers. Molecular results corroborated the morphological ones, showing the same random distribution of genotypes, with no grouping according to origin. Diversity indices were high for each region, and a greater diversity was found within regions, with: a mean number of alleles per locus of 3.530; observed and expected heterozygosity of 0.499 and 0.642, respectively; and Shannon index of 1.03. The absence of spatial structure among cassava genotypes according to their origins shows the anthropic influence in the distribution and movement of germplasm, both within and among regions.Título em português: Diversidade morfológica e molecular entre genótipos de mandioca.Thiago Fonseca Mezette, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética; Caroline Groppo Blumer, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética; Elizabeth Ann Veasey, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética.MEZETTE, T. F.BLUMER, C. G.VEASEY, E. A.2013-08-13T11:11:11Z2013-08-13T11:11:11Z2013-08-1320132017-06-16T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePesquisa Agropecuária Brasileira, Brasília, DF, v. 48, n. 5, p. 510-518, maio 2013.http://www.alice.cnptia.embrapa.br/alice/handle/doc/963983enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T21:29:23Zoai:www.alice.cnptia.embrapa.br:doc/963983Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-15T21:29:23falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T21:29:23Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Morphological and molecular diversity among cassava genotypes.
title Morphological and molecular diversity among cassava genotypes.
spellingShingle Morphological and molecular diversity among cassava genotypes.
MEZETTE, T. F.
Diversidade genética
Microssatélite
Morphological traits
Genetic diversity
Microsatellites
Germoplasma
Manihot Esculenta
Germplasm
Genetic variation
title_short Morphological and molecular diversity among cassava genotypes.
title_full Morphological and molecular diversity among cassava genotypes.
title_fullStr Morphological and molecular diversity among cassava genotypes.
title_full_unstemmed Morphological and molecular diversity among cassava genotypes.
title_sort Morphological and molecular diversity among cassava genotypes.
author MEZETTE, T. F.
author_facet MEZETTE, T. F.
BLUMER, C. G.
VEASEY, E. A.
author_role author
author2 BLUMER, C. G.
VEASEY, E. A.
author2_role author
author
dc.contributor.none.fl_str_mv Thiago Fonseca Mezette, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética; Caroline Groppo Blumer, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética; Elizabeth Ann Veasey, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética.
dc.contributor.author.fl_str_mv MEZETTE, T. F.
BLUMER, C. G.
VEASEY, E. A.
dc.subject.por.fl_str_mv Diversidade genética
Microssatélite
Morphological traits
Genetic diversity
Microsatellites
Germoplasma
Manihot Esculenta
Germplasm
Genetic variation
topic Diversidade genética
Microssatélite
Morphological traits
Genetic diversity
Microsatellites
Germoplasma
Manihot Esculenta
Germplasm
Genetic variation
description The objective of this work was to characterize morphologically and molecularly the genetic diversity of cassava accessions, collected from different regions in Brazil. A descriptive analysis was made for 12 morphological traits in 419 accessions. Data was transformed into binary data for cluster analysis and analysis of molecular variance. A higher proportion of white or cream (71%) root cortex color was found, while flesh colors were predominantly white (49%) and cream (42%). Four accession groups were classified by the cluster analysis, but they were not grouped according to their origin, which indicates that diversity is not structured in space. The variation was greater within regions (95.6%). Sixty genotypes were also evaluated using 14 polymorphic microsatellite markers. Molecular results corroborated the morphological ones, showing the same random distribution of genotypes, with no grouping according to origin. Diversity indices were high for each region, and a greater diversity was found within regions, with: a mean number of alleles per locus of 3.530; observed and expected heterozygosity of 0.499 and 0.642, respectively; and Shannon index of 1.03. The absence of spatial structure among cassava genotypes according to their origins shows the anthropic influence in the distribution and movement of germplasm, both within and among regions.
publishDate 2013
dc.date.none.fl_str_mv 2013-08-13T11:11:11Z
2013-08-13T11:11:11Z
2013-08-13
2013
2017-06-16T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Pesquisa Agropecuária Brasileira, Brasília, DF, v. 48, n. 5, p. 510-518, maio 2013.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/963983
identifier_str_mv Pesquisa Agropecuária Brasileira, Brasília, DF, v. 48, n. 5, p. 510-518, maio 2013.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/963983
dc.language.iso.fl_str_mv eng
language eng
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instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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repository.mail.fl_str_mv cg-riaa@embrapa.br
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