Morphological and molecular diversity among cassava genotypes.
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/963983 |
Resumo: | The objective of this work was to characterize morphologically and molecularly the genetic diversity of cassava accessions, collected from different regions in Brazil. A descriptive analysis was made for 12 morphological traits in 419 accessions. Data was transformed into binary data for cluster analysis and analysis of molecular variance. A higher proportion of white or cream (71%) root cortex color was found, while flesh colors were predominantly white (49%) and cream (42%). Four accession groups were classified by the cluster analysis, but they were not grouped according to their origin, which indicates that diversity is not structured in space. The variation was greater within regions (95.6%). Sixty genotypes were also evaluated using 14 polymorphic microsatellite markers. Molecular results corroborated the morphological ones, showing the same random distribution of genotypes, with no grouping according to origin. Diversity indices were high for each region, and a greater diversity was found within regions, with: a mean number of alleles per locus of 3.530; observed and expected heterozygosity of 0.499 and 0.642, respectively; and Shannon index of 1.03. The absence of spatial structure among cassava genotypes according to their origins shows the anthropic influence in the distribution and movement of germplasm, both within and among regions. |
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Morphological and molecular diversity among cassava genotypes.Diversidade genéticaMicrossatéliteMorphological traitsGenetic diversityMicrosatellitesGermoplasmaManihot EsculentaGermplasmGenetic variationThe objective of this work was to characterize morphologically and molecularly the genetic diversity of cassava accessions, collected from different regions in Brazil. A descriptive analysis was made for 12 morphological traits in 419 accessions. Data was transformed into binary data for cluster analysis and analysis of molecular variance. A higher proportion of white or cream (71%) root cortex color was found, while flesh colors were predominantly white (49%) and cream (42%). Four accession groups were classified by the cluster analysis, but they were not grouped according to their origin, which indicates that diversity is not structured in space. The variation was greater within regions (95.6%). Sixty genotypes were also evaluated using 14 polymorphic microsatellite markers. Molecular results corroborated the morphological ones, showing the same random distribution of genotypes, with no grouping according to origin. Diversity indices were high for each region, and a greater diversity was found within regions, with: a mean number of alleles per locus of 3.530; observed and expected heterozygosity of 0.499 and 0.642, respectively; and Shannon index of 1.03. The absence of spatial structure among cassava genotypes according to their origins shows the anthropic influence in the distribution and movement of germplasm, both within and among regions.Título em português: Diversidade morfológica e molecular entre genótipos de mandioca.Thiago Fonseca Mezette, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética; Caroline Groppo Blumer, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética; Elizabeth Ann Veasey, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética.MEZETTE, T. F.BLUMER, C. G.VEASEY, E. A.2013-08-13T11:11:11Z2013-08-13T11:11:11Z2013-08-1320132017-06-16T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePesquisa Agropecuária Brasileira, Brasília, DF, v. 48, n. 5, p. 510-518, maio 2013.http://www.alice.cnptia.embrapa.br/alice/handle/doc/963983enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T21:29:23Zoai:www.alice.cnptia.embrapa.br:doc/963983Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-15T21:29:23falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T21:29:23Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Morphological and molecular diversity among cassava genotypes. |
title |
Morphological and molecular diversity among cassava genotypes. |
spellingShingle |
Morphological and molecular diversity among cassava genotypes. MEZETTE, T. F. Diversidade genética Microssatélite Morphological traits Genetic diversity Microsatellites Germoplasma Manihot Esculenta Germplasm Genetic variation |
title_short |
Morphological and molecular diversity among cassava genotypes. |
title_full |
Morphological and molecular diversity among cassava genotypes. |
title_fullStr |
Morphological and molecular diversity among cassava genotypes. |
title_full_unstemmed |
Morphological and molecular diversity among cassava genotypes. |
title_sort |
Morphological and molecular diversity among cassava genotypes. |
author |
MEZETTE, T. F. |
author_facet |
MEZETTE, T. F. BLUMER, C. G. VEASEY, E. A. |
author_role |
author |
author2 |
BLUMER, C. G. VEASEY, E. A. |
author2_role |
author author |
dc.contributor.none.fl_str_mv |
Thiago Fonseca Mezette, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética; Caroline Groppo Blumer, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética; Elizabeth Ann Veasey, Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Departamento de Genética. |
dc.contributor.author.fl_str_mv |
MEZETTE, T. F. BLUMER, C. G. VEASEY, E. A. |
dc.subject.por.fl_str_mv |
Diversidade genética Microssatélite Morphological traits Genetic diversity Microsatellites Germoplasma Manihot Esculenta Germplasm Genetic variation |
topic |
Diversidade genética Microssatélite Morphological traits Genetic diversity Microsatellites Germoplasma Manihot Esculenta Germplasm Genetic variation |
description |
The objective of this work was to characterize morphologically and molecularly the genetic diversity of cassava accessions, collected from different regions in Brazil. A descriptive analysis was made for 12 morphological traits in 419 accessions. Data was transformed into binary data for cluster analysis and analysis of molecular variance. A higher proportion of white or cream (71%) root cortex color was found, while flesh colors were predominantly white (49%) and cream (42%). Four accession groups were classified by the cluster analysis, but they were not grouped according to their origin, which indicates that diversity is not structured in space. The variation was greater within regions (95.6%). Sixty genotypes were also evaluated using 14 polymorphic microsatellite markers. Molecular results corroborated the morphological ones, showing the same random distribution of genotypes, with no grouping according to origin. Diversity indices were high for each region, and a greater diversity was found within regions, with: a mean number of alleles per locus of 3.530; observed and expected heterozygosity of 0.499 and 0.642, respectively; and Shannon index of 1.03. The absence of spatial structure among cassava genotypes according to their origins shows the anthropic influence in the distribution and movement of germplasm, both within and among regions. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-08-13T11:11:11Z 2013-08-13T11:11:11Z 2013-08-13 2013 2017-06-16T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Pesquisa Agropecuária Brasileira, Brasília, DF, v. 48, n. 5, p. 510-518, maio 2013. http://www.alice.cnptia.embrapa.br/alice/handle/doc/963983 |
identifier_str_mv |
Pesquisa Agropecuária Brasileira, Brasília, DF, v. 48, n. 5, p. 510-518, maio 2013. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/963983 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503380981252096 |