Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.

Detalhes bibliográficos
Autor(a) principal: BALDAUF, C.
Data de Publicação: 2011
Outros Autores: CIAMPI, M. B., VIGNA, B. B. Z., MORI, G. M., GUEDES, J. P. P., SOUZA, A. P. de, SANTOS, F. A. M. dos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/911321
https://doi.org/10.3732/ajb.1100135
Resumo: ? Premise of the study: We developed a new set of microsatellite markers for studying the genome of the janaguba tree, Himatanthus drasticus (Mart.) Plumel, which is used in folk medicine in northeastern Brazil. These novel markers are being used to evaluate the effect of harvesting on the genetic structure and diversity of natural populations of this species. ? Methods and Results: Microsatellite loci were isolated from an enriched H. drasticus genomic library. Nine primer pairs successfully amplified polymorphic microsatellite regions, with an average of 8.5 alleles per locus. The average values of observed and expected heterozygosity were 0.456 and 0.601, respectively. ? Conclusions: The microsatellite markers described here are valuable tools for population genetics studies of H. drasticus. The majority of the primers also amplified sequences in the genome of another species of the same genus. This new set of markers may be useful in designing a genetic conservation strategy and a sustainable management plan for the species.
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spelling Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.ConservationMolecular markersSustainable managementharvestingmedicinal plants? Premise of the study: We developed a new set of microsatellite markers for studying the genome of the janaguba tree, Himatanthus drasticus (Mart.) Plumel, which is used in folk medicine in northeastern Brazil. These novel markers are being used to evaluate the effect of harvesting on the genetic structure and diversity of natural populations of this species. ? Methods and Results: Microsatellite loci were isolated from an enriched H. drasticus genomic library. Nine primer pairs successfully amplified polymorphic microsatellite regions, with an average of 8.5 alleles per locus. The average values of observed and expected heterozygosity were 0.456 and 0.601, respectively. ? Conclusions: The microsatellite markers described here are valuable tools for population genetics studies of H. drasticus. The majority of the primers also amplified sequences in the genome of another species of the same genus. This new set of markers may be useful in designing a genetic conservation strategy and a sustainable management plan for the species.CRISTNA BALDAUF, UNICAMP/CAMPINAS; MAÍSA B. CIAMPI, ESALQ/PIRACICABA; BIANCA BACCILI ZANOTTO VIGNA, CPPSE; GUSTAVO M. MORI, UNICAMP/CAMPINAS; JULIAN P. P. GUEDES, PUC/CAMPINAS; ANETE P. DE SOUZA, UNICAMP/CAMPINAS; FALVIO A. M. DOS SANTOS, UNICAMP/CAMPINAS.BALDAUF, C.CIAMPI, M. B.VIGNA, B. B. Z.MORI, G. M.GUEDES, J. P. P.SOUZA, A. P. deSANTOS, F. A. M. dos2022-07-19T20:19:36Z2022-07-19T20:19:36Z2012-01-022011info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAmerican Journal of botany, v. 98, n. 9, p. 244-246, Sep. 2011.http://www.alice.cnptia.embrapa.br/alice/handle/doc/911321https://doi.org/10.3732/ajb.1100135enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-07-19T20:19:44Zoai:www.alice.cnptia.embrapa.br:doc/911321Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-07-19T20:19:44falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-07-19T20:19:44Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.
title Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.
spellingShingle Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.
BALDAUF, C.
Conservation
Molecular markers
Sustainable management
harvesting
medicinal plants
title_short Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.
title_full Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.
title_fullStr Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.
title_full_unstemmed Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.
title_sort Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna.
author BALDAUF, C.
author_facet BALDAUF, C.
CIAMPI, M. B.
VIGNA, B. B. Z.
MORI, G. M.
GUEDES, J. P. P.
SOUZA, A. P. de
SANTOS, F. A. M. dos
author_role author
author2 CIAMPI, M. B.
VIGNA, B. B. Z.
MORI, G. M.
GUEDES, J. P. P.
SOUZA, A. P. de
SANTOS, F. A. M. dos
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv CRISTNA BALDAUF, UNICAMP/CAMPINAS; MAÍSA B. CIAMPI, ESALQ/PIRACICABA; BIANCA BACCILI ZANOTTO VIGNA, CPPSE; GUSTAVO M. MORI, UNICAMP/CAMPINAS; JULIAN P. P. GUEDES, PUC/CAMPINAS; ANETE P. DE SOUZA, UNICAMP/CAMPINAS; FALVIO A. M. DOS SANTOS, UNICAMP/CAMPINAS.
dc.contributor.author.fl_str_mv BALDAUF, C.
CIAMPI, M. B.
VIGNA, B. B. Z.
MORI, G. M.
GUEDES, J. P. P.
SOUZA, A. P. de
SANTOS, F. A. M. dos
dc.subject.por.fl_str_mv Conservation
Molecular markers
Sustainable management
harvesting
medicinal plants
topic Conservation
Molecular markers
Sustainable management
harvesting
medicinal plants
description ? Premise of the study: We developed a new set of microsatellite markers for studying the genome of the janaguba tree, Himatanthus drasticus (Mart.) Plumel, which is used in folk medicine in northeastern Brazil. These novel markers are being used to evaluate the effect of harvesting on the genetic structure and diversity of natural populations of this species. ? Methods and Results: Microsatellite loci were isolated from an enriched H. drasticus genomic library. Nine primer pairs successfully amplified polymorphic microsatellite regions, with an average of 8.5 alleles per locus. The average values of observed and expected heterozygosity were 0.456 and 0.601, respectively. ? Conclusions: The microsatellite markers described here are valuable tools for population genetics studies of H. drasticus. The majority of the primers also amplified sequences in the genome of another species of the same genus. This new set of markers may be useful in designing a genetic conservation strategy and a sustainable management plan for the species.
publishDate 2011
dc.date.none.fl_str_mv 2011
2012-01-02
2022-07-19T20:19:36Z
2022-07-19T20:19:36Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv American Journal of botany, v. 98, n. 9, p. 244-246, Sep. 2011.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/911321
https://doi.org/10.3732/ajb.1100135
identifier_str_mv American Journal of botany, v. 98, n. 9, p. 244-246, Sep. 2011.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/911321
https://doi.org/10.3732/ajb.1100135
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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