Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.

Detalhes bibliográficos
Autor(a) principal: PEREIRA, V. M.
Data de Publicação: 2012
Outros Autores: BORGES, C. V., BRANDÃO, L. P., OLIVEIRA, L. S., SOUZA, C. P. F., GONÇALVES, Z. S., SILVA, S. de O. e, SEREJO, J. A. dos S., FERREIRA, C. F., AMORIM, E. P., LEDO, C. A. da S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/944568
Resumo: The objective of this work was to estimate the genetic diversity of improved banana diploids using data from quantitative analysis and from simple sequence repeats (SSR) marker, simultaneously. The experiment was carried out with 33 diploids, in an augmented block design with 30 regular treatments and three common ones. Eighteen agronomic characteristics and 20 SSR primers were used. The agronomic characteristics and the SSR were analyzed simultaneously by the Ward-MLM, cluster, and IML procedures. The Ward clustering method considered the combined matrix obtained by the Gower algorithm. The Ward-MLM procedure identified three ideal groups (G1, G2, and G3) based on pseudo-F and pseudo-t2 statistics. The dendrogram showed relative similarity between the G1 genotypes, justified by genealogy. In G2, 'Calcutta 4' appears in 62% of the genealogies. Similar behavior was observed in G3, in which the 028003-01 diploid is the male parent of the 086079-10 and 042079-06 genotypes. The method with canonical variables had greater discriminatory power than Ward-MLM. Although reduced, the genetic variability available is sufficient to be used in the development of new hybrids.
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spelling Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.Genetic diversityThe objective of this work was to estimate the genetic diversity of improved banana diploids using data from quantitative analysis and from simple sequence repeats (SSR) marker, simultaneously. The experiment was carried out with 33 diploids, in an augmented block design with 30 regular treatments and three common ones. Eighteen agronomic characteristics and 20 SSR primers were used. The agronomic characteristics and the SSR were analyzed simultaneously by the Ward-MLM, cluster, and IML procedures. The Ward clustering method considered the combined matrix obtained by the Gower algorithm. The Ward-MLM procedure identified three ideal groups (G1, G2, and G3) based on pseudo-F and pseudo-t2 statistics. The dendrogram showed relative similarity between the G1 genotypes, justified by genealogy. In G2, 'Calcutta 4' appears in 62% of the genealogies. Similar behavior was observed in G3, in which the 028003-01 diploid is the male parent of the 086079-10 and 042079-06 genotypes. The method with canonical variables had greater discriminatory power than Ward-MLM. Although reduced, the genetic variability available is sufficient to be used in the development of new hybrids.VALQUÍRIA MARTINS PEREIRA, UFLA; CRISTINE VANZ BORGES, UFRB; LÍVIA PINTO BRANDÃO, UFRB; LARISSA SANTOS OLIVEIRA, UFLA; CINTIA PAULA FEITOSA SOUZA, UFRB; ZALMAR SANTANA GONÇALVES, UFRB; SEBASTIÃO DE OLIVEIRA E SILVA, UFRB; JANAY ALMEIDA DOS SANTOS SEREJO, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF; EDSON PERITO AMORIM, CNPMF; CARLOS ALBERTO DA SILVA LEDO, CNPMF.PEREIRA, V. M.BORGES, C. V.BRANDÃO, L. P.OLIVEIRA, L. S.SOUZA, C. P. F.GONÇALVES, Z. S.SILVA, S. de O. eSEREJO, J. A. dos S.FERREIRA, C. F.AMORIM, E. P.LEDO, C. A. da S.2013-01-09T11:11:11Z2013-01-09T11:11:11Z2013-01-0920122013-02-01T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePesquisa Agropecuária Brasileira, Brasília, v. 47, n. 10, p. 1480-1488, out. 2012.0100-204Xhttp://www.alice.cnptia.embrapa.br/alice/handle/doc/944568enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T01:57:28Zoai:www.alice.cnptia.embrapa.br:doc/944568Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T01:57:28Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
spellingShingle Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
PEREIRA, V. M.
Genetic diversity
title_short Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_full Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_fullStr Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_full_unstemmed Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_sort Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
author PEREIRA, V. M.
author_facet PEREIRA, V. M.
BORGES, C. V.
BRANDÃO, L. P.
OLIVEIRA, L. S.
SOUZA, C. P. F.
GONÇALVES, Z. S.
SILVA, S. de O. e
SEREJO, J. A. dos S.
FERREIRA, C. F.
AMORIM, E. P.
LEDO, C. A. da S.
author_role author
author2 BORGES, C. V.
BRANDÃO, L. P.
OLIVEIRA, L. S.
SOUZA, C. P. F.
GONÇALVES, Z. S.
SILVA, S. de O. e
SEREJO, J. A. dos S.
FERREIRA, C. F.
AMORIM, E. P.
LEDO, C. A. da S.
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv VALQUÍRIA MARTINS PEREIRA, UFLA; CRISTINE VANZ BORGES, UFRB; LÍVIA PINTO BRANDÃO, UFRB; LARISSA SANTOS OLIVEIRA, UFLA; CINTIA PAULA FEITOSA SOUZA, UFRB; ZALMAR SANTANA GONÇALVES, UFRB; SEBASTIÃO DE OLIVEIRA E SILVA, UFRB; JANAY ALMEIDA DOS SANTOS SEREJO, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF; EDSON PERITO AMORIM, CNPMF; CARLOS ALBERTO DA SILVA LEDO, CNPMF.
dc.contributor.author.fl_str_mv PEREIRA, V. M.
BORGES, C. V.
BRANDÃO, L. P.
OLIVEIRA, L. S.
SOUZA, C. P. F.
GONÇALVES, Z. S.
SILVA, S. de O. e
SEREJO, J. A. dos S.
FERREIRA, C. F.
AMORIM, E. P.
LEDO, C. A. da S.
dc.subject.por.fl_str_mv Genetic diversity
topic Genetic diversity
description The objective of this work was to estimate the genetic diversity of improved banana diploids using data from quantitative analysis and from simple sequence repeats (SSR) marker, simultaneously. The experiment was carried out with 33 diploids, in an augmented block design with 30 regular treatments and three common ones. Eighteen agronomic characteristics and 20 SSR primers were used. The agronomic characteristics and the SSR were analyzed simultaneously by the Ward-MLM, cluster, and IML procedures. The Ward clustering method considered the combined matrix obtained by the Gower algorithm. The Ward-MLM procedure identified three ideal groups (G1, G2, and G3) based on pseudo-F and pseudo-t2 statistics. The dendrogram showed relative similarity between the G1 genotypes, justified by genealogy. In G2, 'Calcutta 4' appears in 62% of the genealogies. Similar behavior was observed in G3, in which the 028003-01 diploid is the male parent of the 086079-10 and 042079-06 genotypes. The method with canonical variables had greater discriminatory power than Ward-MLM. Although reduced, the genetic variability available is sufficient to be used in the development of new hybrids.
publishDate 2012
dc.date.none.fl_str_mv 2012
2013-01-09T11:11:11Z
2013-01-09T11:11:11Z
2013-01-09
2013-02-01T11:11:11Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Pesquisa Agropecuária Brasileira, Brasília, v. 47, n. 10, p. 1480-1488, out. 2012.
0100-204X
http://www.alice.cnptia.embrapa.br/alice/handle/doc/944568
identifier_str_mv Pesquisa Agropecuária Brasileira, Brasília, v. 47, n. 10, p. 1480-1488, out. 2012.
0100-204X
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/944568
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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