Rational design of diagnostic and vaccination strategies for tuberculosis

Detalhes bibliográficos
Autor(a) principal: Borsuk, Sibele
Data de Publicação: 2012
Outros Autores: Seixas, Fabiana Kömmling, Soares, Daniela Fernandes Ramos, Mendum, Tom, McFadden, Johnjoe, Dellagostin, Odir Antonio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da FURG (RI FURG)
Texto Completo: http://repositorio.furg.br/handle/1/7402
http://dx.doi.org/10.1590/S1413-86702012000100012
Resumo: The development of diagnostic tests which can readily differentiate between vaccinated and tuberculosis-infected individuals is crucial for the wider utilization of bacillus Calmette-Guérin (BCG) as vaccine in humans and animals. BCG_0092 is an antigen that elicits specific delayed type hypersensitivity reactions similar in size and morphological aspects to that elicited by purified protein derivative, in both animals and humans infected with the tubercle bacilli. We carried out bioinformatics analyses of the BCG_0092 and designed a diagnostic test by using the predicted MHC class I epitopes. In addition, we performed a knockout of this gene by homologous recombination in the BCG vaccine strain to allow differentiation of vaccinated from infected individuals. For that, the flanking sequences of the target gene (BCG_0092)were cloned into a suicide vector. Spontaneous double crossovers, which result in wild type revertants or knockouts were selected using SacB. BCG_0092 is present only in members of the Mycobacterium tuberculosis complex. Eight predicted MHC class I epitopes with potential for immunological diagnosis were defined, allowing the design of a specific diagnostic test. The strategy used to delete the (BCG_0092) gene from BCG was successful. The knockout genotype was confirmed by PCR and by Southern blot. The mutant BCG strain has the potential of inducing protection against tuberculosis without interfering with the diagnostic test based on the use of selected epitopes from BCG_0092.
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spelling Borsuk, SibeleSeixas, Fabiana KömmlingSoares, Daniela Fernandes RamosMendum, TomMcFadden, JohnjoeDellagostin, Odir Antonio2017-07-19T18:22:51Z2017-07-19T18:22:51Z2012BORSUK, Sibele et al. Rational design of diagnostic and vaccination strategies for tuberculosis. The Brazilian Journal of Infectious Diseases, v. 16, n. 1, p. 68-73, 2012. Disponível em:< http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702012000100012&lng=en&nrm=iso&tlng=en>. Acesso em: 09 abr. 2017.1413-8670http://repositorio.furg.br/handle/1/7402http://dx.doi.org/10.1590/S1413-86702012000100012The development of diagnostic tests which can readily differentiate between vaccinated and tuberculosis-infected individuals is crucial for the wider utilization of bacillus Calmette-Guérin (BCG) as vaccine in humans and animals. BCG_0092 is an antigen that elicits specific delayed type hypersensitivity reactions similar in size and morphological aspects to that elicited by purified protein derivative, in both animals and humans infected with the tubercle bacilli. We carried out bioinformatics analyses of the BCG_0092 and designed a diagnostic test by using the predicted MHC class I epitopes. In addition, we performed a knockout of this gene by homologous recombination in the BCG vaccine strain to allow differentiation of vaccinated from infected individuals. For that, the flanking sequences of the target gene (BCG_0092)were cloned into a suicide vector. Spontaneous double crossovers, which result in wild type revertants or knockouts were selected using SacB. BCG_0092 is present only in members of the Mycobacterium tuberculosis complex. Eight predicted MHC class I epitopes with potential for immunological diagnosis were defined, allowing the design of a specific diagnostic test. The strategy used to delete the (BCG_0092) gene from BCG was successful. The knockout genotype was confirmed by PCR and by Southern blot. The mutant BCG strain has the potential of inducing protection against tuberculosis without interfering with the diagnostic test based on the use of selected epitopes from BCG_0092.engGene knockout techniquesClinical diagnosisBCG vaccineRational design of diagnostic and vaccination strategies for tuberculosisinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FURG (RI FURG)instname:Universidade Federal do Rio Grande (FURG)instacron:FURGORIGINALv16n1a12.pdfv16n1a12.pdfapplication/pdf877855https://repositorio.furg.br/bitstream/1/7402/1/v16n1a12.pdffffb03892a04e98cd7983cb816c63e96MD51open accessLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.furg.br/bitstream/1/7402/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52open access1/74022022-10-21 16:42:39.29open accessoai:repositorio.furg.br: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Repositório InstitucionalPUBhttps://repositorio.furg.br/oai/request || http://200.19.254.174/oai/requestopendoar:2022-10-21T19:42:39Repositório Institucional da FURG (RI FURG) - Universidade Federal do Rio Grande (FURG)false
dc.title.pt_BR.fl_str_mv Rational design of diagnostic and vaccination strategies for tuberculosis
title Rational design of diagnostic and vaccination strategies for tuberculosis
spellingShingle Rational design of diagnostic and vaccination strategies for tuberculosis
Borsuk, Sibele
Gene knockout techniques
Clinical diagnosis
BCG vaccine
title_short Rational design of diagnostic and vaccination strategies for tuberculosis
title_full Rational design of diagnostic and vaccination strategies for tuberculosis
title_fullStr Rational design of diagnostic and vaccination strategies for tuberculosis
title_full_unstemmed Rational design of diagnostic and vaccination strategies for tuberculosis
title_sort Rational design of diagnostic and vaccination strategies for tuberculosis
author Borsuk, Sibele
author_facet Borsuk, Sibele
Seixas, Fabiana Kömmling
Soares, Daniela Fernandes Ramos
Mendum, Tom
McFadden, Johnjoe
Dellagostin, Odir Antonio
author_role author
author2 Seixas, Fabiana Kömmling
Soares, Daniela Fernandes Ramos
Mendum, Tom
McFadden, Johnjoe
Dellagostin, Odir Antonio
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Borsuk, Sibele
Seixas, Fabiana Kömmling
Soares, Daniela Fernandes Ramos
Mendum, Tom
McFadden, Johnjoe
Dellagostin, Odir Antonio
dc.subject.por.fl_str_mv Gene knockout techniques
Clinical diagnosis
BCG vaccine
topic Gene knockout techniques
Clinical diagnosis
BCG vaccine
description The development of diagnostic tests which can readily differentiate between vaccinated and tuberculosis-infected individuals is crucial for the wider utilization of bacillus Calmette-Guérin (BCG) as vaccine in humans and animals. BCG_0092 is an antigen that elicits specific delayed type hypersensitivity reactions similar in size and morphological aspects to that elicited by purified protein derivative, in both animals and humans infected with the tubercle bacilli. We carried out bioinformatics analyses of the BCG_0092 and designed a diagnostic test by using the predicted MHC class I epitopes. In addition, we performed a knockout of this gene by homologous recombination in the BCG vaccine strain to allow differentiation of vaccinated from infected individuals. For that, the flanking sequences of the target gene (BCG_0092)were cloned into a suicide vector. Spontaneous double crossovers, which result in wild type revertants or knockouts were selected using SacB. BCG_0092 is present only in members of the Mycobacterium tuberculosis complex. Eight predicted MHC class I epitopes with potential for immunological diagnosis were defined, allowing the design of a specific diagnostic test. The strategy used to delete the (BCG_0092) gene from BCG was successful. The knockout genotype was confirmed by PCR and by Southern blot. The mutant BCG strain has the potential of inducing protection against tuberculosis without interfering with the diagnostic test based on the use of selected epitopes from BCG_0092.
publishDate 2012
dc.date.issued.fl_str_mv 2012
dc.date.accessioned.fl_str_mv 2017-07-19T18:22:51Z
dc.date.available.fl_str_mv 2017-07-19T18:22:51Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.citation.fl_str_mv BORSUK, Sibele et al. Rational design of diagnostic and vaccination strategies for tuberculosis. The Brazilian Journal of Infectious Diseases, v. 16, n. 1, p. 68-73, 2012. Disponível em:< http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702012000100012&lng=en&nrm=iso&tlng=en>. Acesso em: 09 abr. 2017.
dc.identifier.uri.fl_str_mv http://repositorio.furg.br/handle/1/7402
dc.identifier.issn.none.fl_str_mv 1413-8670
dc.identifier.doi.pt_BR.fl_str_mv http://dx.doi.org/10.1590/S1413-86702012000100012
identifier_str_mv BORSUK, Sibele et al. Rational design of diagnostic and vaccination strategies for tuberculosis. The Brazilian Journal of Infectious Diseases, v. 16, n. 1, p. 68-73, 2012. Disponível em:< http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702012000100012&lng=en&nrm=iso&tlng=en>. Acesso em: 09 abr. 2017.
1413-8670
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http://dx.doi.org/10.1590/S1413-86702012000100012
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