Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil
Autor(a) principal: | |
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Data de Publicação: | 2007 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3257 |
Resumo: | Worldwide human astroviruses (HAstV) have increasingly been recognized as causative agents of viral gastroenteritis, mainly in infants and young children. The aim of this study was to assess the epidemiology and genotype diversity of HAstVs detected in children who participated in a trial in Belem, Brazil with the rhesus human reassortant rotavirus vaccine tetravalent (RRV-TV). From April/1990 to August/1992, 624 diarrheic stool samples were tested by enzyme immunoassay (EIA) for HAstV, with a positive rate of 4.0 per cent. Reverse transcription-polymerase chain reaction (RT-PCR) was done in 129 samples (25 positive and 104 with twice the optical density (OD) value of negative control by EIA) being 33 positive. The overall positivity yielded by both methods was 5.4 per cent (34/624). Genotyping of the 33 positive samples was done by type-specific RT-PCR and confirmed by sequence analysis. Phylogenetic analysis was performed using a 348-bp fragment of the ORF2 region of the capsid gene. HAstV-1 was the most prevalent, accounting for 45.5 per cent of the isolates, followed by HAstV-2 (27.3 per cent), HAstV-3 (12.1 per cent), HAstV-4 (12.1 per cent), and HAstV-6 (3.0 per cent). The monthly distribution showed that HAstV-1 was predominant in the first year of study (May/1990 to May/1991) with highest prevalence in January/1991. HAstV-2 was predominant from July to November/1991 and HAstV-4 from September to October/1990. At 24 months of age, 30.6 per cent of children had been infected by HAstV. The clinical symptoms registered during HAstV associated-diarrhea were usually mild. These data highlight the circulation of the different HAstV genotypes in Belem during the study period. |
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Gabbay, Yvone BenchimolLinhares, Alexandre da CostaPepino, Elielma Lira CavalcanteNakamura, Liliany SatikoOliveira, Darleise de SouzaSilva, Luciana Damascena daMascarenhas, Joana D'Arc PereiraOliveira, Consuelo Silva deMonteiro, Talita Antônia FurtadoLeite, José Paulo Gagliardi2018-07-18T13:15:22Z2018-07-18T13:15:22Z2007GABBAY, Yvone Benchimol et al. Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil. Journal of Medical Virology, v. 79, n. 5, p. 530-538, 2007.0146-6615https://patua.iec.gov.br/handle/iec/325710.1002/jmv.20813Worldwide human astroviruses (HAstV) have increasingly been recognized as causative agents of viral gastroenteritis, mainly in infants and young children. The aim of this study was to assess the epidemiology and genotype diversity of HAstVs detected in children who participated in a trial in Belem, Brazil with the rhesus human reassortant rotavirus vaccine tetravalent (RRV-TV). From April/1990 to August/1992, 624 diarrheic stool samples were tested by enzyme immunoassay (EIA) for HAstV, with a positive rate of 4.0 per cent. Reverse transcription-polymerase chain reaction (RT-PCR) was done in 129 samples (25 positive and 104 with twice the optical density (OD) value of negative control by EIA) being 33 positive. The overall positivity yielded by both methods was 5.4 per cent (34/624). Genotyping of the 33 positive samples was done by type-specific RT-PCR and confirmed by sequence analysis. Phylogenetic analysis was performed using a 348-bp fragment of the ORF2 region of the capsid gene. HAstV-1 was the most prevalent, accounting for 45.5 per cent of the isolates, followed by HAstV-2 (27.3 per cent), HAstV-3 (12.1 per cent), HAstV-4 (12.1 per cent), and HAstV-6 (3.0 per cent). The monthly distribution showed that HAstV-1 was predominant in the first year of study (May/1990 to May/1991) with highest prevalence in January/1991. HAstV-2 was predominant from July to November/1991 and HAstV-4 from September to October/1990. At 24 months of age, 30.6 per cent of children had been infected by HAstV. The clinical symptoms registered during HAstV associated-diarrhea were usually mild. These data highlight the circulation of the different HAstV genotypes in Belem during the study period.This study received financial support from SECTAM/FUNTEC/PA, IEC/ SVS/MS, IOC/FIOCRUZ, and CNPqMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Department of Virology. Rio de Janeiro, RJ, Brazil.engWileyPrevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleInfecções por Astroviridae / epidemiologiaMamastrovirusVacinas contra RotavirusVariação GenéticaReação em Cadeia da PolimeraseDiarreia / virologiaGastroenteriteinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALPrevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil.pdfPrevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil.pdfapplication/pdf251034https://patua.iec.gov.br/bitstreams/a4e77a8b-629a-4344-a95f-bdc4937f7cd7/download26708612b5b121cab6e9fdb167490130MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-871https://patua.iec.gov.br/bitstreams/c4ac7654-76f2-47f4-bd7b-dd8c37845dc1/download52f1732ea66fbd1123abe39f5373b797MD52TEXTPrevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil.pdf.txtPrevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil.pdf.txtExtracted texttext/plain40884https://patua.iec.gov.br/bitstreams/bb5d972e-3876-40a5-bb54-ad6bd8b2c75d/downloadcf5a12126476e72b348d19e2479d73c9MD55THUMBNAILPrevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil.pdf.jpgPrevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil.pdf.jpgGenerated Thumbnailimage/jpeg6316https://patua.iec.gov.br/bitstreams/c92aa51b-d9cb-4bf8-89e9-31e9e6719c24/download01a8db534eb9720c977545942be6e068MD56iec/32572022-10-20 21:19:47.706oai:patua.iec.gov.br:iec/3257https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T21:19:47Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)falseVG9kb3Mgb3MgZG9jdW1lbnRvcyBkZXNzYSBjb2xlw6fDo28gc2VndWVtIGEgTGljZW7Dp2EgQ3JlYXRpdmUgY29tbW9ucy4= |
dc.title.pt_BR.fl_str_mv |
Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil |
title |
Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil |
spellingShingle |
Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil Gabbay, Yvone Benchimol Infecções por Astroviridae / epidemiologia Mamastrovirus Vacinas contra Rotavirus Variação Genética Reação em Cadeia da Polimerase Diarreia / virologia Gastroenterite |
title_short |
Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil |
title_full |
Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil |
title_fullStr |
Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil |
title_full_unstemmed |
Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil |
title_sort |
Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil |
author |
Gabbay, Yvone Benchimol |
author_facet |
Gabbay, Yvone Benchimol Linhares, Alexandre da Costa Pepino, Elielma Lira Cavalcante Nakamura, Liliany Satiko Oliveira, Darleise de Souza Silva, Luciana Damascena da Mascarenhas, Joana D'Arc Pereira Oliveira, Consuelo Silva de Monteiro, Talita Antônia Furtado Leite, José Paulo Gagliardi |
author_role |
author |
author2 |
Linhares, Alexandre da Costa Pepino, Elielma Lira Cavalcante Nakamura, Liliany Satiko Oliveira, Darleise de Souza Silva, Luciana Damascena da Mascarenhas, Joana D'Arc Pereira Oliveira, Consuelo Silva de Monteiro, Talita Antônia Furtado Leite, José Paulo Gagliardi |
author2_role |
author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Gabbay, Yvone Benchimol Linhares, Alexandre da Costa Pepino, Elielma Lira Cavalcante Nakamura, Liliany Satiko Oliveira, Darleise de Souza Silva, Luciana Damascena da Mascarenhas, Joana D'Arc Pereira Oliveira, Consuelo Silva de Monteiro, Talita Antônia Furtado Leite, José Paulo Gagliardi |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Infecções por Astroviridae / epidemiologia Mamastrovirus Vacinas contra Rotavirus Variação Genética Reação em Cadeia da Polimerase Diarreia / virologia Gastroenterite |
topic |
Infecções por Astroviridae / epidemiologia Mamastrovirus Vacinas contra Rotavirus Variação Genética Reação em Cadeia da Polimerase Diarreia / virologia Gastroenterite |
description |
Worldwide human astroviruses (HAstV) have increasingly been recognized as causative agents of viral gastroenteritis, mainly in infants and young children. The aim of this study was to assess the epidemiology and genotype diversity of HAstVs detected in children who participated in a trial in Belem, Brazil with the rhesus human reassortant rotavirus vaccine tetravalent (RRV-TV). From April/1990 to August/1992, 624 diarrheic stool samples were tested by enzyme immunoassay (EIA) for HAstV, with a positive rate of 4.0 per cent. Reverse transcription-polymerase chain reaction (RT-PCR) was done in 129 samples (25 positive and 104 with twice the optical density (OD) value of negative control by EIA) being 33 positive. The overall positivity yielded by both methods was 5.4 per cent (34/624). Genotyping of the 33 positive samples was done by type-specific RT-PCR and confirmed by sequence analysis. Phylogenetic analysis was performed using a 348-bp fragment of the ORF2 region of the capsid gene. HAstV-1 was the most prevalent, accounting for 45.5 per cent of the isolates, followed by HAstV-2 (27.3 per cent), HAstV-3 (12.1 per cent), HAstV-4 (12.1 per cent), and HAstV-6 (3.0 per cent). The monthly distribution showed that HAstV-1 was predominant in the first year of study (May/1990 to May/1991) with highest prevalence in January/1991. HAstV-2 was predominant from July to November/1991 and HAstV-4 from September to October/1990. At 24 months of age, 30.6 per cent of children had been infected by HAstV. The clinical symptoms registered during HAstV associated-diarrhea were usually mild. These data highlight the circulation of the different HAstV genotypes in Belem during the study period. |
publishDate |
2007 |
dc.date.issued.fl_str_mv |
2007 |
dc.date.accessioned.fl_str_mv |
2018-07-18T13:15:22Z |
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2018-07-18T13:15:22Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
GABBAY, Yvone Benchimol et al. Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil. Journal of Medical Virology, v. 79, n. 5, p. 530-538, 2007. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3257 |
dc.identifier.issn.-.fl_str_mv |
0146-6615 |
dc.identifier.doi.-.fl_str_mv |
10.1002/jmv.20813 |
identifier_str_mv |
GABBAY, Yvone Benchimol et al. Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil. Journal of Medical Virology, v. 79, n. 5, p. 530-538, 2007. 0146-6615 10.1002/jmv.20813 |
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Wiley |
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Wiley |
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