Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/4230 |
Resumo: | Histidine-rich proteins 2 and 3 gene (pfhrp2 and pfhrp3) deletions affect the efficacy of rapid diagnostic tests (RDTs) based on the histidine-rich protein 2 (HRP2), compromising the correct identification of the Plasmodium falciparum species. Therefore, molecular surveillance is necessary for the investigation of the actual prevalence of this phenomenon and the extent of the disappearance of these genes in these areas and other South American countries, thus guiding national malaria control programs on the appropriate use of RDTs. This study aimed to evaluate the pfhrp2 and pfhrp3 gene deletion in P. falciparum in endemic areas of the Brazilian Amazon. Aliquots of DNA from the biorepository of the Laboratory of Basic Research in Malaria, Evandro Chagas Institute, with a positive diagnosis for P. falciparum infection as determined by microscopy and molecular assays, were included. Monoinfection was confirmed by nested-polymerase chain reaction assay, and DNA quality was assessed by amplification of the merozoite surface protein-2 gene (msp2). The pfhrp2 and pfhrp3 genes were amplified using primers for the region between exons 1 and 2 and for all extension of exon 2. Aliquots of DNA from 192 P. falciparum isolates were included in the study, with 68.7% (132/192) from the municipality of Cruzeiro do Sul (Acre) and 31.3% (60/192) from Manaus (Amazonas). Of this total, 82.8% (159/192) of the samples were considered of good quality. In the state of Acre, 71.7% (71/99) showed pfhrp2 gene deletion and 94.9% (94/99) showed pfhrp3 gene deletion, while in the state of Amazonas, 100.0% (60/60) of the samples showed pfhrp2 gene deletion and 98.3% (59/60) showed pfhrp3 gene deletion. Moreover, 79.8% (127/159) of isolates displayed gene deletion. Our findings confirm the presence of a parasite population with high frequencies of pfhrp2 and pfhrp3 gene deletions in the Brazilian Amazon region. This suggests reconsidering the use of HRP2-based RDTs in the Acre and Amazonas states and calls attention to the importance of molecular surveillance and mapping of pfhrp2/pfhrp3 deletions in this area and in other locations in the Amazon region to guarantee appropriate patient care, control and ultimately contribute to achieving P. falciparum malaria elimination |
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Góes, LeandroSiqueira, Nathália ChammaPeres, José MárioNascimento, José MariaValle, SuianeArcanjo, Ana RuthLacerda, Marcus Vinícius Guimarães deBlume, LianaPóvoa, Marinete MarinsViana, Giselle Maria Rachid2021-02-01T16:13:16Z2021-02-01T16:13:16Z2021GÓES, Leandro et al. Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon. International Journal of Environmental Research and Public Health, v. 18, n. 1, p. 1-9, 2021.1660-4601https://patua.iec.gov.br/handle/iec/423010.3390/ijerph18010123Histidine-rich proteins 2 and 3 gene (pfhrp2 and pfhrp3) deletions affect the efficacy of rapid diagnostic tests (RDTs) based on the histidine-rich protein 2 (HRP2), compromising the correct identification of the Plasmodium falciparum species. Therefore, molecular surveillance is necessary for the investigation of the actual prevalence of this phenomenon and the extent of the disappearance of these genes in these areas and other South American countries, thus guiding national malaria control programs on the appropriate use of RDTs. This study aimed to evaluate the pfhrp2 and pfhrp3 gene deletion in P. falciparum in endemic areas of the Brazilian Amazon. Aliquots of DNA from the biorepository of the Laboratory of Basic Research in Malaria, Evandro Chagas Institute, with a positive diagnosis for P. falciparum infection as determined by microscopy and molecular assays, were included. Monoinfection was confirmed by nested-polymerase chain reaction assay, and DNA quality was assessed by amplification of the merozoite surface protein-2 gene (msp2). The pfhrp2 and pfhrp3 genes were amplified using primers for the region between exons 1 and 2 and for all extension of exon 2. Aliquots of DNA from 192 P. falciparum isolates were included in the study, with 68.7% (132/192) from the municipality of Cruzeiro do Sul (Acre) and 31.3% (60/192) from Manaus (Amazonas). Of this total, 82.8% (159/192) of the samples were considered of good quality. In the state of Acre, 71.7% (71/99) showed pfhrp2 gene deletion and 94.9% (94/99) showed pfhrp3 gene deletion, while in the state of Amazonas, 100.0% (60/60) of the samples showed pfhrp2 gene deletion and 98.3% (59/60) showed pfhrp3 gene deletion. Moreover, 79.8% (127/159) of isolates displayed gene deletion. Our findings confirm the presence of a parasite population with high frequencies of pfhrp2 and pfhrp3 gene deletions in the Brazilian Amazon region. This suggests reconsidering the use of HRP2-based RDTs in the Acre and Amazonas states and calls attention to the importance of molecular surveillance and mapping of pfhrp2/pfhrp3 deletions in this area and in other locations in the Amazon region to guarantee appropriate patient care, control and ultimately contribute to achieving P. falciparum malaria eliminationThis study was supported by the National Council for Scientific and Technological Development—Brazil (CNPq)–Grant 302292/2017-9 as well as by the Evandro Chagas Institute’s own budget resourceMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós-Graduação em epidemiologia e Vigilância em Saúde. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.State Health Department of Acre. Hemonúcleo Cruzeiro do Sul. Cruzeiro do Sul, AC, Brazil.Central Public Health Laboratory of Amazonas. Manaus, AM, Brazil.Heitor Vieira Dourado Tropical Medicine Foundation. Manaus, AM, Brazil / Fundação Oswaldo cruz. Leônidas and Maria Deane Institute. Manaus, AM, Brazil.Ministry of Health. Health Surveillance Secretariat. Department of Immunization and Communicable Diseases. General Coordination for the Monitoring of Zoonoses and Malaria Vector Transmission Diseases. Malaria Technical Group. Brasília, DF, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil / National Council for Scientific and Technological Development. Brasília, DF, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.engMDPIEvaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazoninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleMalária falciparum / diagnósticoPlasmodium falciparum / patogenicidadePlasmodium falciparum / genéticaDeleção de GenesHistidina / análiseSensibilidade e EspecificidadeReação em Cadeia da Polimerase / métodosTestes ImediatosCruzeiro do Sul (Acre)Manaus (AM)info:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALEvaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon.pdfEvaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon.pdfapplication/pdf1392592https://patua.iec.gov.br/bitstreams/39f91219-fd83-4332-abf6-0ce6e7c077a4/downloada9d4f738edede1d86bb3fb35059a2feeMD51LICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv |
Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon |
title |
Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon |
spellingShingle |
Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon Góes, Leandro Malária falciparum / diagnóstico Plasmodium falciparum / patogenicidade Plasmodium falciparum / genética Deleção de Genes Histidina / análise Sensibilidade e Especificidade Reação em Cadeia da Polimerase / métodos Testes Imediatos Cruzeiro do Sul (Acre) Manaus (AM) |
title_short |
Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon |
title_full |
Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon |
title_fullStr |
Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon |
title_full_unstemmed |
Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon |
title_sort |
Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon |
author |
Góes, Leandro |
author_facet |
Góes, Leandro Siqueira, Nathália Chamma Peres, José Mário Nascimento, José Maria Valle, Suiane Arcanjo, Ana Ruth Lacerda, Marcus Vinícius Guimarães de Blume, Liana Póvoa, Marinete Marins Viana, Giselle Maria Rachid |
author_role |
author |
author2 |
Siqueira, Nathália Chamma Peres, José Mário Nascimento, José Maria Valle, Suiane Arcanjo, Ana Ruth Lacerda, Marcus Vinícius Guimarães de Blume, Liana Póvoa, Marinete Marins Viana, Giselle Maria Rachid |
author2_role |
author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Góes, Leandro Siqueira, Nathália Chamma Peres, José Mário Nascimento, José Maria Valle, Suiane Arcanjo, Ana Ruth Lacerda, Marcus Vinícius Guimarães de Blume, Liana Póvoa, Marinete Marins Viana, Giselle Maria Rachid |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Malária falciparum / diagnóstico Plasmodium falciparum / patogenicidade Plasmodium falciparum / genética Deleção de Genes Histidina / análise Sensibilidade e Especificidade Reação em Cadeia da Polimerase / métodos Testes Imediatos Cruzeiro do Sul (Acre) Manaus (AM) |
topic |
Malária falciparum / diagnóstico Plasmodium falciparum / patogenicidade Plasmodium falciparum / genética Deleção de Genes Histidina / análise Sensibilidade e Especificidade Reação em Cadeia da Polimerase / métodos Testes Imediatos Cruzeiro do Sul (Acre) Manaus (AM) |
description |
Histidine-rich proteins 2 and 3 gene (pfhrp2 and pfhrp3) deletions affect the efficacy of rapid diagnostic tests (RDTs) based on the histidine-rich protein 2 (HRP2), compromising the correct identification of the Plasmodium falciparum species. Therefore, molecular surveillance is necessary for the investigation of the actual prevalence of this phenomenon and the extent of the disappearance of these genes in these areas and other South American countries, thus guiding national malaria control programs on the appropriate use of RDTs. This study aimed to evaluate the pfhrp2 and pfhrp3 gene deletion in P. falciparum in endemic areas of the Brazilian Amazon. Aliquots of DNA from the biorepository of the Laboratory of Basic Research in Malaria, Evandro Chagas Institute, with a positive diagnosis for P. falciparum infection as determined by microscopy and molecular assays, were included. Monoinfection was confirmed by nested-polymerase chain reaction assay, and DNA quality was assessed by amplification of the merozoite surface protein-2 gene (msp2). The pfhrp2 and pfhrp3 genes were amplified using primers for the region between exons 1 and 2 and for all extension of exon 2. Aliquots of DNA from 192 P. falciparum isolates were included in the study, with 68.7% (132/192) from the municipality of Cruzeiro do Sul (Acre) and 31.3% (60/192) from Manaus (Amazonas). Of this total, 82.8% (159/192) of the samples were considered of good quality. In the state of Acre, 71.7% (71/99) showed pfhrp2 gene deletion and 94.9% (94/99) showed pfhrp3 gene deletion, while in the state of Amazonas, 100.0% (60/60) of the samples showed pfhrp2 gene deletion and 98.3% (59/60) showed pfhrp3 gene deletion. Moreover, 79.8% (127/159) of isolates displayed gene deletion. Our findings confirm the presence of a parasite population with high frequencies of pfhrp2 and pfhrp3 gene deletions in the Brazilian Amazon region. This suggests reconsidering the use of HRP2-based RDTs in the Acre and Amazonas states and calls attention to the importance of molecular surveillance and mapping of pfhrp2/pfhrp3 deletions in this area and in other locations in the Amazon region to guarantee appropriate patient care, control and ultimately contribute to achieving P. falciparum malaria elimination |
publishDate |
2021 |
dc.date.accessioned.fl_str_mv |
2021-02-01T16:13:16Z |
dc.date.available.fl_str_mv |
2021-02-01T16:13:16Z |
dc.date.issued.fl_str_mv |
2021 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
GÓES, Leandro et al. Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon. International Journal of Environmental Research and Public Health, v. 18, n. 1, p. 1-9, 2021. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/4230 |
dc.identifier.issn.-.fl_str_mv |
1660-4601 |
dc.identifier.doi.-.fl_str_mv |
10.3390/ijerph18010123 |
identifier_str_mv |
GÓES, Leandro et al. Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon. International Journal of Environmental Research and Public Health, v. 18, n. 1, p. 1-9, 2021. 1660-4601 10.3390/ijerph18010123 |
url |
https://patua.iec.gov.br/handle/iec/4230 |
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eng |
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eng |
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info:eu-repo/semantics/openAccess |
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openAccess |
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MDPI |
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MDPI |
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