Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon

Detalhes bibliográficos
Autor(a) principal: Góes, Leandro
Data de Publicação: 2021
Outros Autores: Siqueira, Nathália Chamma, Peres, José Mário, Nascimento, José Maria, Valle, Suiane, Arcanjo, Ana Ruth, Lacerda, Marcus Vinícius Guimarães de, Blume, Liana, Póvoa, Marinete Marins, Viana, Giselle Maria Rachid
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
Texto Completo: https://patua.iec.gov.br/handle/iec/4230
Resumo: Histidine-rich proteins 2 and 3 gene (pfhrp2 and pfhrp3) deletions affect the efficacy of rapid diagnostic tests (RDTs) based on the histidine-rich protein 2 (HRP2), compromising the correct identification of the Plasmodium falciparum species. Therefore, molecular surveillance is necessary for the investigation of the actual prevalence of this phenomenon and the extent of the disappearance of these genes in these areas and other South American countries, thus guiding national malaria control programs on the appropriate use of RDTs. This study aimed to evaluate the pfhrp2 and pfhrp3 gene deletion in P. falciparum in endemic areas of the Brazilian Amazon. Aliquots of DNA from the biorepository of the Laboratory of Basic Research in Malaria, Evandro Chagas Institute, with a positive diagnosis for P. falciparum infection as determined by microscopy and molecular assays, were included. Monoinfection was confirmed by nested-polymerase chain reaction assay, and DNA quality was assessed by amplification of the merozoite surface protein-2 gene (msp2). The pfhrp2 and pfhrp3 genes were amplified using primers for the region between exons 1 and 2 and for all extension of exon 2. Aliquots of DNA from 192 P. falciparum isolates were included in the study, with 68.7% (132/192) from the municipality of Cruzeiro do Sul (Acre) and 31.3% (60/192) from Manaus (Amazonas). Of this total, 82.8% (159/192) of the samples were considered of good quality. In the state of Acre, 71.7% (71/99) showed pfhrp2 gene deletion and 94.9% (94/99) showed pfhrp3 gene deletion, while in the state of Amazonas, 100.0% (60/60) of the samples showed pfhrp2 gene deletion and 98.3% (59/60) showed pfhrp3 gene deletion. Moreover, 79.8% (127/159) of isolates displayed gene deletion. Our findings confirm the presence of a parasite population with high frequencies of pfhrp2 and pfhrp3 gene deletions in the Brazilian Amazon region. This suggests reconsidering the use of HRP2-based RDTs in the Acre and Amazonas states and calls attention to the importance of molecular surveillance and mapping of pfhrp2/pfhrp3 deletions in this area and in other locations in the Amazon region to guarantee appropriate patient care, control and ultimately contribute to achieving P. falciparum malaria elimination
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spelling Góes, LeandroSiqueira, Nathália ChammaPeres, José MárioNascimento, José MariaValle, SuianeArcanjo, Ana RuthLacerda, Marcus Vinícius Guimarães deBlume, LianaPóvoa, Marinete MarinsViana, Giselle Maria Rachid2021-02-01T16:13:16Z2021-02-01T16:13:16Z2021GÓES, Leandro et al. Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon. International Journal of Environmental Research and Public Health, v. 18, n. 1, p. 1-9, 2021.1660-4601https://patua.iec.gov.br/handle/iec/423010.3390/ijerph18010123Histidine-rich proteins 2 and 3 gene (pfhrp2 and pfhrp3) deletions affect the efficacy of rapid diagnostic tests (RDTs) based on the histidine-rich protein 2 (HRP2), compromising the correct identification of the Plasmodium falciparum species. Therefore, molecular surveillance is necessary for the investigation of the actual prevalence of this phenomenon and the extent of the disappearance of these genes in these areas and other South American countries, thus guiding national malaria control programs on the appropriate use of RDTs. This study aimed to evaluate the pfhrp2 and pfhrp3 gene deletion in P. falciparum in endemic areas of the Brazilian Amazon. Aliquots of DNA from the biorepository of the Laboratory of Basic Research in Malaria, Evandro Chagas Institute, with a positive diagnosis for P. falciparum infection as determined by microscopy and molecular assays, were included. Monoinfection was confirmed by nested-polymerase chain reaction assay, and DNA quality was assessed by amplification of the merozoite surface protein-2 gene (msp2). The pfhrp2 and pfhrp3 genes were amplified using primers for the region between exons 1 and 2 and for all extension of exon 2. Aliquots of DNA from 192 P. falciparum isolates were included in the study, with 68.7% (132/192) from the municipality of Cruzeiro do Sul (Acre) and 31.3% (60/192) from Manaus (Amazonas). Of this total, 82.8% (159/192) of the samples were considered of good quality. In the state of Acre, 71.7% (71/99) showed pfhrp2 gene deletion and 94.9% (94/99) showed pfhrp3 gene deletion, while in the state of Amazonas, 100.0% (60/60) of the samples showed pfhrp2 gene deletion and 98.3% (59/60) showed pfhrp3 gene deletion. Moreover, 79.8% (127/159) of isolates displayed gene deletion. Our findings confirm the presence of a parasite population with high frequencies of pfhrp2 and pfhrp3 gene deletions in the Brazilian Amazon region. This suggests reconsidering the use of HRP2-based RDTs in the Acre and Amazonas states and calls attention to the importance of molecular surveillance and mapping of pfhrp2/pfhrp3 deletions in this area and in other locations in the Amazon region to guarantee appropriate patient care, control and ultimately contribute to achieving P. falciparum malaria eliminationThis study was supported by the National Council for Scientific and Technological Development—Brazil (CNPq)–Grant 302292/2017-9 as well as by the Evandro Chagas Institute’s own budget resourceMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós-Graduação em epidemiologia e Vigilância em Saúde. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.State Health Department of Acre. Hemonúcleo Cruzeiro do Sul. Cruzeiro do Sul, AC, Brazil.Central Public Health Laboratory of Amazonas. Manaus, AM, Brazil.Heitor Vieira Dourado Tropical Medicine Foundation. Manaus, AM, Brazil / Fundação Oswaldo cruz. Leônidas and Maria Deane Institute. Manaus, AM, Brazil.Ministry of Health. Health Surveillance Secretariat. Department of Immunization and Communicable Diseases. General Coordination for the Monitoring of Zoonoses and Malaria Vector Transmission Diseases. Malaria Technical Group. Brasília, DF, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil / National Council for Scientific and Technological Development. Brasília, DF, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.engMDPIEvaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazoninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleMalária falciparum / diagnósticoPlasmodium falciparum / patogenicidadePlasmodium falciparum / genéticaDeleção de GenesHistidina / análiseSensibilidade e EspecificidadeReação em Cadeia da Polimerase / métodosTestes ImediatosCruzeiro do Sul (Acre)Manaus (AM)info:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALEvaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon.pdfEvaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon.pdfapplication/pdf1392592https://patua.iec.gov.br/bitstreams/39f91219-fd83-4332-abf6-0ce6e7c077a4/downloada9d4f738edede1d86bb3fb35059a2feeMD51LICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
title Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
spellingShingle Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
Góes, Leandro
Malária falciparum / diagnóstico
Plasmodium falciparum / patogenicidade
Plasmodium falciparum / genética
Deleção de Genes
Histidina / análise
Sensibilidade e Especificidade
Reação em Cadeia da Polimerase / métodos
Testes Imediatos
Cruzeiro do Sul (Acre)
Manaus (AM)
title_short Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
title_full Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
title_fullStr Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
title_full_unstemmed Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
title_sort Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
author Góes, Leandro
author_facet Góes, Leandro
Siqueira, Nathália Chamma
Peres, José Mário
Nascimento, José Maria
Valle, Suiane
Arcanjo, Ana Ruth
Lacerda, Marcus Vinícius Guimarães de
Blume, Liana
Póvoa, Marinete Marins
Viana, Giselle Maria Rachid
author_role author
author2 Siqueira, Nathália Chamma
Peres, José Mário
Nascimento, José Maria
Valle, Suiane
Arcanjo, Ana Ruth
Lacerda, Marcus Vinícius Guimarães de
Blume, Liana
Póvoa, Marinete Marins
Viana, Giselle Maria Rachid
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Góes, Leandro
Siqueira, Nathália Chamma
Peres, José Mário
Nascimento, José Maria
Valle, Suiane
Arcanjo, Ana Ruth
Lacerda, Marcus Vinícius Guimarães de
Blume, Liana
Póvoa, Marinete Marins
Viana, Giselle Maria Rachid
dc.subject.decsPrimary.pt_BR.fl_str_mv Malária falciparum / diagnóstico
Plasmodium falciparum / patogenicidade
Plasmodium falciparum / genética
Deleção de Genes
Histidina / análise
Sensibilidade e Especificidade
Reação em Cadeia da Polimerase / métodos
Testes Imediatos
Cruzeiro do Sul (Acre)
Manaus (AM)
topic Malária falciparum / diagnóstico
Plasmodium falciparum / patogenicidade
Plasmodium falciparum / genética
Deleção de Genes
Histidina / análise
Sensibilidade e Especificidade
Reação em Cadeia da Polimerase / métodos
Testes Imediatos
Cruzeiro do Sul (Acre)
Manaus (AM)
description Histidine-rich proteins 2 and 3 gene (pfhrp2 and pfhrp3) deletions affect the efficacy of rapid diagnostic tests (RDTs) based on the histidine-rich protein 2 (HRP2), compromising the correct identification of the Plasmodium falciparum species. Therefore, molecular surveillance is necessary for the investigation of the actual prevalence of this phenomenon and the extent of the disappearance of these genes in these areas and other South American countries, thus guiding national malaria control programs on the appropriate use of RDTs. This study aimed to evaluate the pfhrp2 and pfhrp3 gene deletion in P. falciparum in endemic areas of the Brazilian Amazon. Aliquots of DNA from the biorepository of the Laboratory of Basic Research in Malaria, Evandro Chagas Institute, with a positive diagnosis for P. falciparum infection as determined by microscopy and molecular assays, were included. Monoinfection was confirmed by nested-polymerase chain reaction assay, and DNA quality was assessed by amplification of the merozoite surface protein-2 gene (msp2). The pfhrp2 and pfhrp3 genes were amplified using primers for the region between exons 1 and 2 and for all extension of exon 2. Aliquots of DNA from 192 P. falciparum isolates were included in the study, with 68.7% (132/192) from the municipality of Cruzeiro do Sul (Acre) and 31.3% (60/192) from Manaus (Amazonas). Of this total, 82.8% (159/192) of the samples were considered of good quality. In the state of Acre, 71.7% (71/99) showed pfhrp2 gene deletion and 94.9% (94/99) showed pfhrp3 gene deletion, while in the state of Amazonas, 100.0% (60/60) of the samples showed pfhrp2 gene deletion and 98.3% (59/60) showed pfhrp3 gene deletion. Moreover, 79.8% (127/159) of isolates displayed gene deletion. Our findings confirm the presence of a parasite population with high frequencies of pfhrp2 and pfhrp3 gene deletions in the Brazilian Amazon region. This suggests reconsidering the use of HRP2-based RDTs in the Acre and Amazonas states and calls attention to the importance of molecular surveillance and mapping of pfhrp2/pfhrp3 deletions in this area and in other locations in the Amazon region to guarantee appropriate patient care, control and ultimately contribute to achieving P. falciparum malaria elimination
publishDate 2021
dc.date.accessioned.fl_str_mv 2021-02-01T16:13:16Z
dc.date.available.fl_str_mv 2021-02-01T16:13:16Z
dc.date.issued.fl_str_mv 2021
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.citation.fl_str_mv GÓES, Leandro et al. Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon. International Journal of Environmental Research and Public Health, v. 18, n. 1, p. 1-9, 2021.
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/4230
dc.identifier.issn.-.fl_str_mv 1660-4601
dc.identifier.doi.-.fl_str_mv 10.3390/ijerph18010123
identifier_str_mv GÓES, Leandro et al. Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon. International Journal of Environmental Research and Public Health, v. 18, n. 1, p. 1-9, 2021.
1660-4601
10.3390/ijerph18010123
url https://patua.iec.gov.br/handle/iec/4230
dc.language.iso.fl_str_mv eng
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