Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Revista do Instituto de Medicina Tropical de São Paulo |
Texto Completo: | https://www.revistas.usp.br/rimtsp/article/view/192455 |
Resumo: | In Brazil, few studies on the molecular aspects of hepatitis B virus (HBV) infection have been conducted in the interior regions of Sao Paulo State. This study aimed to identify HBV genotypes and evaluate strains with resistance mutations for nucleoside analogues in the Administrative Region (AR) of the municipality of Sao Jose do Rio Preto. We performed nested PCRs of 127 samples from the Health Care Services of the AR to amplify, sequence and analyze fragments of the HBV DNA, in order to identify genotypes and resistance mutations. The HBV S/Pol regions of 126 samples were successfully amplified and sequenced. Five different genotypes were found, and the main ones were A, D and F; a greater number of samples contained the subgenotypes A1 (n = 51; 40.5%), D3 (n = 36; 28.6%), A2 (n = 14; 11.1%) and F2a (n = 9; 7.1%). Resistance mutations (rtM204V/I/S) associated or not with compensatory mutations (rtL180M, rtV173L) were identified in 13.9% (5/36) of patients undergoing viral treatment and 1.1% (1/90) of naïve patients. The diversity of genotypes/subgenotypes found is probably due to the intense migration occurring in the region. These data can complement epidemiological and clinical surveillance, and can be used for a more effective management of chronic HBV patients. |
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Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutationsHepatitis B virusHBV genotypesResistant mutationsBrazilIn Brazil, few studies on the molecular aspects of hepatitis B virus (HBV) infection have been conducted in the interior regions of Sao Paulo State. This study aimed to identify HBV genotypes and evaluate strains with resistance mutations for nucleoside analogues in the Administrative Region (AR) of the municipality of Sao Jose do Rio Preto. We performed nested PCRs of 127 samples from the Health Care Services of the AR to amplify, sequence and analyze fragments of the HBV DNA, in order to identify genotypes and resistance mutations. The HBV S/Pol regions of 126 samples were successfully amplified and sequenced. Five different genotypes were found, and the main ones were A, D and F; a greater number of samples contained the subgenotypes A1 (n = 51; 40.5%), D3 (n = 36; 28.6%), A2 (n = 14; 11.1%) and F2a (n = 9; 7.1%). Resistance mutations (rtM204V/I/S) associated or not with compensatory mutations (rtL180M, rtV173L) were identified in 13.9% (5/36) of patients undergoing viral treatment and 1.1% (1/90) of naïve patients. The diversity of genotypes/subgenotypes found is probably due to the intense migration occurring in the region. These data can complement epidemiological and clinical surveillance, and can be used for a more effective management of chronic HBV patients.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2021-11-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/19245510.1590/S1678-9946202163078Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e78Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e78Revista do Instituto de Medicina Tropical de São Paulo; v. 63 (2021); e781678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/192455/177415Copyright (c) 2021 Brígida Helena da Silva Meneghello, Márcia Maria Costa Nunes Soares, Vanessa Cristina Martins Silva, Marcilio Figueiredo Lemos, Murilo Castro Cervato, João Caetano Filho, Roberta Sitnik, Tânia Cristina Higino Estécio, Adriana Parise Compri, João Renato Rebello Pinho , Regina Célia Moreirahttps://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessMeneghello, Brígida Helena da Silva Soares, Márcia Maria Costa Nunes Silva, Vanessa Cristina Martins Lemos, Marcilio Figueiredo Cervato, Murilo Castro Caetano Filho, João Sitnik, Roberta Estécio, Tânia Cristina Higino Compri, Adriana Parise Pinho , João Renato RebelloMoreira, Regina Célia 2022-05-16T13:44:35Zoai:revistas.usp.br:article/192455Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:53:00.280274Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true |
dc.title.none.fl_str_mv |
Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations |
title |
Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations |
spellingShingle |
Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations Meneghello, Brígida Helena da Silva Hepatitis B virus HBV genotypes Resistant mutations Brazil |
title_short |
Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations |
title_full |
Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations |
title_fullStr |
Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations |
title_full_unstemmed |
Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations |
title_sort |
Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations |
author |
Meneghello, Brígida Helena da Silva |
author_facet |
Meneghello, Brígida Helena da Silva Soares, Márcia Maria Costa Nunes Silva, Vanessa Cristina Martins Lemos, Marcilio Figueiredo Cervato, Murilo Castro Caetano Filho, João Sitnik, Roberta Estécio, Tânia Cristina Higino Compri, Adriana Parise Pinho , João Renato Rebello Moreira, Regina Célia |
author_role |
author |
author2 |
Soares, Márcia Maria Costa Nunes Silva, Vanessa Cristina Martins Lemos, Marcilio Figueiredo Cervato, Murilo Castro Caetano Filho, João Sitnik, Roberta Estécio, Tânia Cristina Higino Compri, Adriana Parise Pinho , João Renato Rebello Moreira, Regina Célia |
author2_role |
author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Meneghello, Brígida Helena da Silva Soares, Márcia Maria Costa Nunes Silva, Vanessa Cristina Martins Lemos, Marcilio Figueiredo Cervato, Murilo Castro Caetano Filho, João Sitnik, Roberta Estécio, Tânia Cristina Higino Compri, Adriana Parise Pinho , João Renato Rebello Moreira, Regina Célia |
dc.subject.por.fl_str_mv |
Hepatitis B virus HBV genotypes Resistant mutations Brazil |
topic |
Hepatitis B virus HBV genotypes Resistant mutations Brazil |
description |
In Brazil, few studies on the molecular aspects of hepatitis B virus (HBV) infection have been conducted in the interior regions of Sao Paulo State. This study aimed to identify HBV genotypes and evaluate strains with resistance mutations for nucleoside analogues in the Administrative Region (AR) of the municipality of Sao Jose do Rio Preto. We performed nested PCRs of 127 samples from the Health Care Services of the AR to amplify, sequence and analyze fragments of the HBV DNA, in order to identify genotypes and resistance mutations. The HBV S/Pol regions of 126 samples were successfully amplified and sequenced. Five different genotypes were found, and the main ones were A, D and F; a greater number of samples contained the subgenotypes A1 (n = 51; 40.5%), D3 (n = 36; 28.6%), A2 (n = 14; 11.1%) and F2a (n = 9; 7.1%). Resistance mutations (rtM204V/I/S) associated or not with compensatory mutations (rtL180M, rtV173L) were identified in 13.9% (5/36) of patients undergoing viral treatment and 1.1% (1/90) of naïve patients. The diversity of genotypes/subgenotypes found is probably due to the intense migration occurring in the region. These data can complement epidemiological and clinical surveillance, and can be used for a more effective management of chronic HBV patients. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-11-12 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/192455 10.1590/S1678-9946202163078 |
url |
https://www.revistas.usp.br/rimtsp/article/view/192455 |
identifier_str_mv |
10.1590/S1678-9946202163078 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/192455/177415 |
dc.rights.driver.fl_str_mv |
https://creativecommons.org/licenses/by-nc/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
dc.source.none.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e78 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e78 Revista do Instituto de Medicina Tropical de São Paulo; v. 63 (2021); e78 1678-9946 0036-4665 reponame:Revista do Instituto de Medicina Tropical de São Paulo instname:Instituto de Medicina Tropical (IMT) instacron:IMT |
instname_str |
Instituto de Medicina Tropical (IMT) |
instacron_str |
IMT |
institution |
IMT |
reponame_str |
Revista do Instituto de Medicina Tropical de São Paulo |
collection |
Revista do Instituto de Medicina Tropical de São Paulo |
repository.name.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT) |
repository.mail.fl_str_mv |
||revimtsp@usp.br |
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1798951653738545152 |