Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations

Detalhes bibliográficos
Autor(a) principal: Meneghello, Brígida Helena da Silva
Data de Publicação: 2021
Outros Autores: Soares, Márcia Maria Costa Nunes, Silva, Vanessa Cristina Martins, Lemos, Marcilio Figueiredo, Cervato, Murilo Castro, Caetano Filho, João, Sitnik, Roberta, Estécio, Tânia Cristina Higino, Compri, Adriana Parise, Pinho , João Renato Rebello, Moreira, Regina Célia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista do Instituto de Medicina Tropical de São Paulo
Texto Completo: https://www.revistas.usp.br/rimtsp/article/view/192455
Resumo: In Brazil, few studies on the molecular aspects of hepatitis B virus (HBV) infection have been conducted in the interior regions of Sao Paulo State. This study aimed to identify HBV genotypes and evaluate strains with resistance mutations for nucleoside analogues in the Administrative Region (AR) of the municipality of Sao Jose do Rio Preto. We performed nested PCRs of 127 samples from the Health Care Services of the AR to amplify, sequence and analyze fragments of the HBV DNA, in order to identify genotypes and resistance mutations. The HBV S/Pol regions of 126 samples were successfully amplified and sequenced. Five different genotypes were found, and the main ones were A, D and F; a greater number of samples contained the subgenotypes A1 (n = 51; 40.5%), D3 (n = 36; 28.6%), A2 (n = 14; 11.1%) and F2a (n = 9; 7.1%). Resistance mutations (rtM204V/I/S) associated or not with compensatory mutations (rtL180M, rtV173L) were identified in 13.9% (5/36) of patients undergoing viral treatment and 1.1% (1/90) of naïve patients. The diversity of genotypes/subgenotypes found is probably due to the intense migration occurring in the region. These data can complement epidemiological and clinical surveillance, and can be used for a more effective management of chronic HBV patients.
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spelling Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutationsHepatitis B virusHBV genotypesResistant mutationsBrazilIn Brazil, few studies on the molecular aspects of hepatitis B virus (HBV) infection have been conducted in the interior regions of Sao Paulo State. This study aimed to identify HBV genotypes and evaluate strains with resistance mutations for nucleoside analogues in the Administrative Region (AR) of the municipality of Sao Jose do Rio Preto. We performed nested PCRs of 127 samples from the Health Care Services of the AR to amplify, sequence and analyze fragments of the HBV DNA, in order to identify genotypes and resistance mutations. The HBV S/Pol regions of 126 samples were successfully amplified and sequenced. Five different genotypes were found, and the main ones were A, D and F; a greater number of samples contained the subgenotypes A1 (n = 51; 40.5%), D3 (n = 36; 28.6%), A2 (n = 14; 11.1%) and F2a (n = 9; 7.1%). Resistance mutations (rtM204V/I/S) associated or not with compensatory mutations (rtL180M, rtV173L) were identified in 13.9% (5/36) of patients undergoing viral treatment and 1.1% (1/90) of naïve patients. The diversity of genotypes/subgenotypes found is probably due to the intense migration occurring in the region. These data can complement epidemiological and clinical surveillance, and can be used for a more effective management of chronic HBV patients.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2021-11-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/19245510.1590/S1678-9946202163078Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e78Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e78Revista do Instituto de Medicina Tropical de São Paulo; v. 63 (2021); e781678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/192455/177415Copyright (c) 2021 Brígida Helena da Silva Meneghello, Márcia Maria Costa Nunes Soares, Vanessa Cristina Martins Silva, Marcilio Figueiredo Lemos, Murilo Castro Cervato, João Caetano Filho, Roberta Sitnik, Tânia Cristina Higino Estécio, Adriana Parise Compri, João Renato Rebello Pinho , Regina Célia Moreirahttps://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessMeneghello, Brígida Helena da Silva Soares, Márcia Maria Costa Nunes Silva, Vanessa Cristina Martins Lemos, Marcilio Figueiredo Cervato, Murilo Castro Caetano Filho, João Sitnik, Roberta Estécio, Tânia Cristina Higino Compri, Adriana Parise Pinho , João Renato RebelloMoreira, Regina Célia 2022-05-16T13:44:35Zoai:revistas.usp.br:article/192455Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:53:00.280274Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true
dc.title.none.fl_str_mv Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
title Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
spellingShingle Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
Meneghello, Brígida Helena da Silva
Hepatitis B virus
HBV genotypes
Resistant mutations
Brazil
title_short Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
title_full Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
title_fullStr Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
title_full_unstemmed Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
title_sort Hepatitis B in the Northwestern region of Sao Paulo State: genotypes and resistance mutations
author Meneghello, Brígida Helena da Silva
author_facet Meneghello, Brígida Helena da Silva
Soares, Márcia Maria Costa Nunes
Silva, Vanessa Cristina Martins
Lemos, Marcilio Figueiredo
Cervato, Murilo Castro
Caetano Filho, João
Sitnik, Roberta
Estécio, Tânia Cristina Higino
Compri, Adriana Parise
Pinho , João Renato Rebello
Moreira, Regina Célia
author_role author
author2 Soares, Márcia Maria Costa Nunes
Silva, Vanessa Cristina Martins
Lemos, Marcilio Figueiredo
Cervato, Murilo Castro
Caetano Filho, João
Sitnik, Roberta
Estécio, Tânia Cristina Higino
Compri, Adriana Parise
Pinho , João Renato Rebello
Moreira, Regina Célia
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Meneghello, Brígida Helena da Silva
Soares, Márcia Maria Costa Nunes
Silva, Vanessa Cristina Martins
Lemos, Marcilio Figueiredo
Cervato, Murilo Castro
Caetano Filho, João
Sitnik, Roberta
Estécio, Tânia Cristina Higino
Compri, Adriana Parise
Pinho , João Renato Rebello
Moreira, Regina Célia
dc.subject.por.fl_str_mv Hepatitis B virus
HBV genotypes
Resistant mutations
Brazil
topic Hepatitis B virus
HBV genotypes
Resistant mutations
Brazil
description In Brazil, few studies on the molecular aspects of hepatitis B virus (HBV) infection have been conducted in the interior regions of Sao Paulo State. This study aimed to identify HBV genotypes and evaluate strains with resistance mutations for nucleoside analogues in the Administrative Region (AR) of the municipality of Sao Jose do Rio Preto. We performed nested PCRs of 127 samples from the Health Care Services of the AR to amplify, sequence and analyze fragments of the HBV DNA, in order to identify genotypes and resistance mutations. The HBV S/Pol regions of 126 samples were successfully amplified and sequenced. Five different genotypes were found, and the main ones were A, D and F; a greater number of samples contained the subgenotypes A1 (n = 51; 40.5%), D3 (n = 36; 28.6%), A2 (n = 14; 11.1%) and F2a (n = 9; 7.1%). Resistance mutations (rtM204V/I/S) associated or not with compensatory mutations (rtL180M, rtV173L) were identified in 13.9% (5/36) of patients undergoing viral treatment and 1.1% (1/90) of naïve patients. The diversity of genotypes/subgenotypes found is probably due to the intense migration occurring in the region. These data can complement epidemiological and clinical surveillance, and can be used for a more effective management of chronic HBV patients.
publishDate 2021
dc.date.none.fl_str_mv 2021-11-12
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/192455
10.1590/S1678-9946202163078
url https://www.revistas.usp.br/rimtsp/article/view/192455
identifier_str_mv 10.1590/S1678-9946202163078
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/192455/177415
dc.rights.driver.fl_str_mv https://creativecommons.org/licenses/by-nc/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
dc.source.none.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e78
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e78
Revista do Instituto de Medicina Tropical de São Paulo; v. 63 (2021); e78
1678-9946
0036-4665
reponame:Revista do Instituto de Medicina Tropical de São Paulo
instname:Instituto de Medicina Tropical (IMT)
instacron:IMT
instname_str Instituto de Medicina Tropical (IMT)
instacron_str IMT
institution IMT
reponame_str Revista do Instituto de Medicina Tropical de São Paulo
collection Revista do Instituto de Medicina Tropical de São Paulo
repository.name.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)
repository.mail.fl_str_mv ||revimtsp@usp.br
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