Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Revista do Instituto de Medicina Tropical de São Paulo |
DOI: | 10.1590/S1678-9946201961057 |
Texto Completo: | https://www.revistas.usp.br/rimtsp/article/view/163058 |
Resumo: | Chikungunya virus (CHIKV) is an arbovirus that emerged in the Americas in 2013. Infection with CHIKV is symptomatic in most of the cases and patients can develop chronic arthralgia that lasts from months to years in over 40% of the cases. The East-Central-South Africa (ECSA) genotype was introduced in Brazil in 2014, in Bahia State. Here we report the circulation of the CHIKV ECSA genotype in Piaui State, Northeast Brazil, during the years 2016-2017. The phylogenetic analysis revealed a single introduction of this lineage probably in 2015 and its maintenance at least until 2017. This analysis has also demonstrated the proximity of this genotype with isolates from neighboring States, and its partial nucleotide sequence of the viral E1 gene revealed a synapomorphy synonyms. This finding highlights the spread of the ECSA genotype in Brazil and supports its circulation in the Brazilian Northeast. |
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Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast BrazilChikungunya virusBrazilECSA genotypeArbovirusTogavirusAlphavirusMolecular surveillanceEpidemiologyE1 geneChikungunya virus (CHIKV) is an arbovirus that emerged in the Americas in 2013. Infection with CHIKV is symptomatic in most of the cases and patients can develop chronic arthralgia that lasts from months to years in over 40% of the cases. The East-Central-South Africa (ECSA) genotype was introduced in Brazil in 2014, in Bahia State. Here we report the circulation of the CHIKV ECSA genotype in Piaui State, Northeast Brazil, during the years 2016-2017. The phylogenetic analysis revealed a single introduction of this lineage probably in 2015 and its maintenance at least until 2017. This analysis has also demonstrated the proximity of this genotype with isolates from neighboring States, and its partial nucleotide sequence of the viral E1 gene revealed a synapomorphy synonyms. This finding highlights the spread of the ECSA genotype in Brazil and supports its circulation in the Brazilian Northeast.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2019-10-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfapplication/xmlhttps://www.revistas.usp.br/rimtsp/article/view/16305810.1590/S1678-9946201961057Revista do Instituto de Medicina Tropical de São Paulo; Vol. 61 (2019); e57Revista do Instituto de Medicina Tropical de São Paulo; Vol. 61 (2019); e57Revista do Instituto de Medicina Tropical de São Paulo; v. 61 (2019); e571678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/163058/156862https://www.revistas.usp.br/rimtsp/article/view/163058/156863Copyright (c) 2019 Revista do Instituto de Medicina Tropical de São Pauloinfo:eu-repo/semantics/openAccessCardoso, Felipe DanielRezende, Izabela Mauricio deBarros, Emanuela Lima TeixeiraSacchetto, LíviaGarcês, Tereza Cristina de Carvalho SouzaSilva, Natalia Ingrid OliveiraAlves, Pedro AugustoSoares, Jefferson OliveiraKroon, Erna GeessienPereira, Anna Carolina Toledo da CunhaDrumond, Betânia PaivaFerreira, Gustavo Portela2019-10-09T17:05:52Zoai:revistas.usp.br:article/163058Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:52:50.440725Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true |
dc.title.none.fl_str_mv |
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil |
title |
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil |
spellingShingle |
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil Cardoso, Felipe Daniel Chikungunya virus Brazil ECSA genotype Arbovirus Togavirus Alphavirus Molecular surveillance Epidemiology E1 gene Cardoso, Felipe Daniel Chikungunya virus Brazil ECSA genotype Arbovirus Togavirus Alphavirus Molecular surveillance Epidemiology E1 gene |
title_short |
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil |
title_full |
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil |
title_fullStr |
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil |
title_full_unstemmed |
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil |
title_sort |
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil |
author |
Cardoso, Felipe Daniel |
author_facet |
Cardoso, Felipe Daniel Cardoso, Felipe Daniel Rezende, Izabela Mauricio de Barros, Emanuela Lima Teixeira Sacchetto, Lívia Garcês, Tereza Cristina de Carvalho Souza Silva, Natalia Ingrid Oliveira Alves, Pedro Augusto Soares, Jefferson Oliveira Kroon, Erna Geessien Pereira, Anna Carolina Toledo da Cunha Drumond, Betânia Paiva Ferreira, Gustavo Portela Rezende, Izabela Mauricio de Barros, Emanuela Lima Teixeira Sacchetto, Lívia Garcês, Tereza Cristina de Carvalho Souza Silva, Natalia Ingrid Oliveira Alves, Pedro Augusto Soares, Jefferson Oliveira Kroon, Erna Geessien Pereira, Anna Carolina Toledo da Cunha Drumond, Betânia Paiva Ferreira, Gustavo Portela |
author_role |
author |
author2 |
Rezende, Izabela Mauricio de Barros, Emanuela Lima Teixeira Sacchetto, Lívia Garcês, Tereza Cristina de Carvalho Souza Silva, Natalia Ingrid Oliveira Alves, Pedro Augusto Soares, Jefferson Oliveira Kroon, Erna Geessien Pereira, Anna Carolina Toledo da Cunha Drumond, Betânia Paiva Ferreira, Gustavo Portela |
author2_role |
author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Cardoso, Felipe Daniel Rezende, Izabela Mauricio de Barros, Emanuela Lima Teixeira Sacchetto, Lívia Garcês, Tereza Cristina de Carvalho Souza Silva, Natalia Ingrid Oliveira Alves, Pedro Augusto Soares, Jefferson Oliveira Kroon, Erna Geessien Pereira, Anna Carolina Toledo da Cunha Drumond, Betânia Paiva Ferreira, Gustavo Portela |
dc.subject.por.fl_str_mv |
Chikungunya virus Brazil ECSA genotype Arbovirus Togavirus Alphavirus Molecular surveillance Epidemiology E1 gene |
topic |
Chikungunya virus Brazil ECSA genotype Arbovirus Togavirus Alphavirus Molecular surveillance Epidemiology E1 gene |
description |
Chikungunya virus (CHIKV) is an arbovirus that emerged in the Americas in 2013. Infection with CHIKV is symptomatic in most of the cases and patients can develop chronic arthralgia that lasts from months to years in over 40% of the cases. The East-Central-South Africa (ECSA) genotype was introduced in Brazil in 2014, in Bahia State. Here we report the circulation of the CHIKV ECSA genotype in Piaui State, Northeast Brazil, during the years 2016-2017. The phylogenetic analysis revealed a single introduction of this lineage probably in 2015 and its maintenance at least until 2017. This analysis has also demonstrated the proximity of this genotype with isolates from neighboring States, and its partial nucleotide sequence of the viral E1 gene revealed a synapomorphy synonyms. This finding highlights the spread of the ECSA genotype in Brazil and supports its circulation in the Brazilian Northeast. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-09 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/163058 10.1590/S1678-9946201961057 |
url |
https://www.revistas.usp.br/rimtsp/article/view/163058 |
identifier_str_mv |
10.1590/S1678-9946201961057 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/163058/156862 https://www.revistas.usp.br/rimtsp/article/view/163058/156863 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2019 Revista do Instituto de Medicina Tropical de São Paulo info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2019 Revista do Instituto de Medicina Tropical de São Paulo |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf application/xml |
dc.publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
dc.source.none.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 61 (2019); e57 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 61 (2019); e57 Revista do Instituto de Medicina Tropical de São Paulo; v. 61 (2019); e57 1678-9946 0036-4665 reponame:Revista do Instituto de Medicina Tropical de São Paulo instname:Instituto de Medicina Tropical (IMT) instacron:IMT |
instname_str |
Instituto de Medicina Tropical (IMT) |
instacron_str |
IMT |
institution |
IMT |
reponame_str |
Revista do Instituto de Medicina Tropical de São Paulo |
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Revista do Instituto de Medicina Tropical de São Paulo |
repository.name.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT) |
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1822181091420667904 |
dc.identifier.doi.none.fl_str_mv |
10.1590/S1678-9946201961057 |