Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil

Detalhes bibliográficos
Autor(a) principal: Cardoso, Felipe Daniel
Data de Publicação: 2019
Outros Autores: Rezende, Izabela Mauricio de, Barros, Emanuela Lima Teixeira, Sacchetto, Lívia, Garcês, Tereza Cristina de Carvalho Souza, Silva, Natalia Ingrid Oliveira, Alves, Pedro Augusto, Soares, Jefferson Oliveira, Kroon, Erna Geessien, Pereira, Anna Carolina Toledo da Cunha, Drumond, Betânia Paiva, Ferreira, Gustavo Portela
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista do Instituto de Medicina Tropical de São Paulo
DOI: 10.1590/S1678-9946201961057
Texto Completo: https://www.revistas.usp.br/rimtsp/article/view/163058
Resumo: Chikungunya virus (CHIKV) is an arbovirus that emerged in the Americas in 2013. Infection with CHIKV is symptomatic in most of the cases and patients can develop chronic arthralgia that lasts from months to years in over 40% of the cases. The East-Central-South Africa (ECSA) genotype was introduced in Brazil in 2014, in Bahia State. Here we report the circulation of the CHIKV ECSA genotype in Piaui State, Northeast Brazil, during the years 2016-2017. The phylogenetic analysis revealed a single introduction of this lineage probably in 2015 and its maintenance at least until 2017. This analysis has also demonstrated the proximity of this genotype with isolates from neighboring States, and its partial nucleotide sequence of the viral E1 gene revealed a synapomorphy synonyms. This finding highlights the spread of the ECSA genotype in Brazil and supports its circulation in the Brazilian Northeast.
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spelling Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast BrazilChikungunya virusBrazilECSA genotypeArbovirusTogavirusAlphavirusMolecular surveillanceEpidemiologyE1 geneChikungunya virus (CHIKV) is an arbovirus that emerged in the Americas in 2013. Infection with CHIKV is symptomatic in most of the cases and patients can develop chronic arthralgia that lasts from months to years in over 40% of the cases. The East-Central-South Africa (ECSA) genotype was introduced in Brazil in 2014, in Bahia State. Here we report the circulation of the CHIKV ECSA genotype in Piaui State, Northeast Brazil, during the years 2016-2017. The phylogenetic analysis revealed a single introduction of this lineage probably in 2015 and its maintenance at least until 2017. This analysis has also demonstrated the proximity of this genotype with isolates from neighboring States, and its partial nucleotide sequence of the viral E1 gene revealed a synapomorphy synonyms. This finding highlights the spread of the ECSA genotype in Brazil and supports its circulation in the Brazilian Northeast.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2019-10-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfapplication/xmlhttps://www.revistas.usp.br/rimtsp/article/view/16305810.1590/S1678-9946201961057Revista do Instituto de Medicina Tropical de São Paulo; Vol. 61 (2019); e57Revista do Instituto de Medicina Tropical de São Paulo; Vol. 61 (2019); e57Revista do Instituto de Medicina Tropical de São Paulo; v. 61 (2019); e571678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/163058/156862https://www.revistas.usp.br/rimtsp/article/view/163058/156863Copyright (c) 2019 Revista do Instituto de Medicina Tropical de São Pauloinfo:eu-repo/semantics/openAccessCardoso, Felipe DanielRezende, Izabela Mauricio deBarros, Emanuela Lima TeixeiraSacchetto, LíviaGarcês, Tereza Cristina de Carvalho SouzaSilva, Natalia Ingrid OliveiraAlves, Pedro AugustoSoares, Jefferson OliveiraKroon, Erna GeessienPereira, Anna Carolina Toledo da CunhaDrumond, Betânia PaivaFerreira, Gustavo Portela2019-10-09T17:05:52Zoai:revistas.usp.br:article/163058Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:52:50.440725Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true
dc.title.none.fl_str_mv Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
title Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
spellingShingle Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
Cardoso, Felipe Daniel
Chikungunya virus
Brazil
ECSA genotype
Arbovirus
Togavirus
Alphavirus
Molecular surveillance
Epidemiology
E1 gene
Cardoso, Felipe Daniel
Chikungunya virus
Brazil
ECSA genotype
Arbovirus
Togavirus
Alphavirus
Molecular surveillance
Epidemiology
E1 gene
title_short Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
title_full Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
title_fullStr Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
title_full_unstemmed Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
title_sort Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil
author Cardoso, Felipe Daniel
author_facet Cardoso, Felipe Daniel
Cardoso, Felipe Daniel
Rezende, Izabela Mauricio de
Barros, Emanuela Lima Teixeira
Sacchetto, Lívia
Garcês, Tereza Cristina de Carvalho Souza
Silva, Natalia Ingrid Oliveira
Alves, Pedro Augusto
Soares, Jefferson Oliveira
Kroon, Erna Geessien
Pereira, Anna Carolina Toledo da Cunha
Drumond, Betânia Paiva
Ferreira, Gustavo Portela
Rezende, Izabela Mauricio de
Barros, Emanuela Lima Teixeira
Sacchetto, Lívia
Garcês, Tereza Cristina de Carvalho Souza
Silva, Natalia Ingrid Oliveira
Alves, Pedro Augusto
Soares, Jefferson Oliveira
Kroon, Erna Geessien
Pereira, Anna Carolina Toledo da Cunha
Drumond, Betânia Paiva
Ferreira, Gustavo Portela
author_role author
author2 Rezende, Izabela Mauricio de
Barros, Emanuela Lima Teixeira
Sacchetto, Lívia
Garcês, Tereza Cristina de Carvalho Souza
Silva, Natalia Ingrid Oliveira
Alves, Pedro Augusto
Soares, Jefferson Oliveira
Kroon, Erna Geessien
Pereira, Anna Carolina Toledo da Cunha
Drumond, Betânia Paiva
Ferreira, Gustavo Portela
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Cardoso, Felipe Daniel
Rezende, Izabela Mauricio de
Barros, Emanuela Lima Teixeira
Sacchetto, Lívia
Garcês, Tereza Cristina de Carvalho Souza
Silva, Natalia Ingrid Oliveira
Alves, Pedro Augusto
Soares, Jefferson Oliveira
Kroon, Erna Geessien
Pereira, Anna Carolina Toledo da Cunha
Drumond, Betânia Paiva
Ferreira, Gustavo Portela
dc.subject.por.fl_str_mv Chikungunya virus
Brazil
ECSA genotype
Arbovirus
Togavirus
Alphavirus
Molecular surveillance
Epidemiology
E1 gene
topic Chikungunya virus
Brazil
ECSA genotype
Arbovirus
Togavirus
Alphavirus
Molecular surveillance
Epidemiology
E1 gene
description Chikungunya virus (CHIKV) is an arbovirus that emerged in the Americas in 2013. Infection with CHIKV is symptomatic in most of the cases and patients can develop chronic arthralgia that lasts from months to years in over 40% of the cases. The East-Central-South Africa (ECSA) genotype was introduced in Brazil in 2014, in Bahia State. Here we report the circulation of the CHIKV ECSA genotype in Piaui State, Northeast Brazil, during the years 2016-2017. The phylogenetic analysis revealed a single introduction of this lineage probably in 2015 and its maintenance at least until 2017. This analysis has also demonstrated the proximity of this genotype with isolates from neighboring States, and its partial nucleotide sequence of the viral E1 gene revealed a synapomorphy synonyms. This finding highlights the spread of the ECSA genotype in Brazil and supports its circulation in the Brazilian Northeast.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-09
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/163058
10.1590/S1678-9946201961057
url https://www.revistas.usp.br/rimtsp/article/view/163058
identifier_str_mv 10.1590/S1678-9946201961057
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/163058/156862
https://www.revistas.usp.br/rimtsp/article/view/163058/156863
dc.rights.driver.fl_str_mv Copyright (c) 2019 Revista do Instituto de Medicina Tropical de São Paulo
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2019 Revista do Instituto de Medicina Tropical de São Paulo
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/xml
dc.publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
dc.source.none.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo; Vol. 61 (2019); e57
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 61 (2019); e57
Revista do Instituto de Medicina Tropical de São Paulo; v. 61 (2019); e57
1678-9946
0036-4665
reponame:Revista do Instituto de Medicina Tropical de São Paulo
instname:Instituto de Medicina Tropical (IMT)
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instname_str Instituto de Medicina Tropical (IMT)
instacron_str IMT
institution IMT
reponame_str Revista do Instituto de Medicina Tropical de São Paulo
collection Revista do Instituto de Medicina Tropical de São Paulo
repository.name.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)
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dc.identifier.doi.none.fl_str_mv 10.1590/S1678-9946201961057