DNA barcoding of fish fauna from low order streams of Tapajós River basin

Detalhes bibliográficos
Autor(a) principal: Guimarães, Karen Larissa Auzier
Data de Publicação: 2018
Outros Autores: Sousa, Marcos Paulo Alho de, Ribeiro, Frank Raynner Vasconcelos, Porto, Jorge Ivan Rebelo, Rodrigues, Luís Reginaldo Ribeiro
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/14654
Resumo: The Amazon basin harbors a megadiverse fish fauna spread in an intricate network of big rivers and small streams. The Amazonian streams are home of many small sized fishes that remains poorly documented. In order to accelerate the scientific knowledge on these important aquatic systems we adopted a modern integrative approach joining morphology and molecular tools to investigate the ichthyofauna assemblages from low order streams situated on the lower Tapajós River Basin. Cytochrome c Oxidase I (COI) DNA barcodes from 252 specimens collected from 10 stream sites were obtained. The combined analysis revealed 29 species, 21 genera and 11 families. Cryptic diversity was evidenced in Knodus sp.1, Aequidens epae and Copella callolepis, in which deep genetic divergence were detected (intraspecific distances: 20.48%, 7.99% and 3.77%, respectively). The putative new species showed closer relationships with their counterparts occurring in the Tapajós-Xingu water drainages. © 2018 Guimarães et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
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spelling Guimarães, Karen Larissa AuzierSousa, Marcos Paulo Alho deRibeiro, Frank Raynner VasconcelosPorto, Jorge Ivan RebeloRodrigues, Luís Reginaldo Ribeiro2020-04-24T16:59:57Z2020-04-24T16:59:57Z2018https://repositorio.inpa.gov.br/handle/1/1465410.1371/journal.pone.0209430The Amazon basin harbors a megadiverse fish fauna spread in an intricate network of big rivers and small streams. The Amazonian streams are home of many small sized fishes that remains poorly documented. In order to accelerate the scientific knowledge on these important aquatic systems we adopted a modern integrative approach joining morphology and molecular tools to investigate the ichthyofauna assemblages from low order streams situated on the lower Tapajós River Basin. Cytochrome c Oxidase I (COI) DNA barcodes from 252 specimens collected from 10 stream sites were obtained. The combined analysis revealed 29 species, 21 genera and 11 families. Cryptic diversity was evidenced in Knodus sp.1, Aequidens epae and Copella callolepis, in which deep genetic divergence were detected (intraspecific distances: 20.48%, 7.99% and 3.77%, respectively). The putative new species showed closer relationships with their counterparts occurring in the Tapajós-Xingu water drainages. © 2018 Guimarães et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Volume 13, Número 12Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAequidens EpaeChordataCoi GeneControlled StudyCopella CallolepisDna BarcodingFaunaGeneGene SequenceGenetic DistanceGenetic VariabilityIntraspecific DistanceKnodusNonhumanRiver BasinStream (river)Water SupplyAnimalsBiodiversityBrasilEnvironmental ProtectionFishGeneticsPhylogenyRiverCytochrome C OxidaseFish ProteinAnimalssBiodiversityBrasilConservation Of Natural ResourcesDna Barcoding, TaxonomicElectron Transport Complex IvFish ProteinsFishesPhylogenyRiversDNA barcoding of fish fauna from low order streams of Tapajós River basininfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePLoS ONEengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf3912483https://repositorio.inpa.gov.br/bitstream/1/14654/1/artigo-inpa.pdfbb2b10af225aec9900919132bd297127MD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/14654/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/146542020-07-14 09:19:01.279oai:repositorio:1/14654Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T13:19:01Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv DNA barcoding of fish fauna from low order streams of Tapajós River basin
title DNA barcoding of fish fauna from low order streams of Tapajós River basin
spellingShingle DNA barcoding of fish fauna from low order streams of Tapajós River basin
Guimarães, Karen Larissa Auzier
Aequidens Epae
Chordata
Coi Gene
Controlled Study
Copella Callolepis
Dna Barcoding
Fauna
Gene
Gene Sequence
Genetic Distance
Genetic Variability
Intraspecific Distance
Knodus
Nonhuman
River Basin
Stream (river)
Water Supply
Animals
Biodiversity
Brasil
Environmental Protection
Fish
Genetics
Phylogeny
River
Cytochrome C Oxidase
Fish Protein
Animalss
Biodiversity
Brasil
Conservation Of Natural Resources
Dna Barcoding, Taxonomic
Electron Transport Complex Iv
Fish Proteins
Fishes
Phylogeny
Rivers
title_short DNA barcoding of fish fauna from low order streams of Tapajós River basin
title_full DNA barcoding of fish fauna from low order streams of Tapajós River basin
title_fullStr DNA barcoding of fish fauna from low order streams of Tapajós River basin
title_full_unstemmed DNA barcoding of fish fauna from low order streams of Tapajós River basin
title_sort DNA barcoding of fish fauna from low order streams of Tapajós River basin
author Guimarães, Karen Larissa Auzier
author_facet Guimarães, Karen Larissa Auzier
Sousa, Marcos Paulo Alho de
Ribeiro, Frank Raynner Vasconcelos
Porto, Jorge Ivan Rebelo
Rodrigues, Luís Reginaldo Ribeiro
author_role author
author2 Sousa, Marcos Paulo Alho de
Ribeiro, Frank Raynner Vasconcelos
Porto, Jorge Ivan Rebelo
Rodrigues, Luís Reginaldo Ribeiro
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Guimarães, Karen Larissa Auzier
Sousa, Marcos Paulo Alho de
Ribeiro, Frank Raynner Vasconcelos
Porto, Jorge Ivan Rebelo
Rodrigues, Luís Reginaldo Ribeiro
dc.subject.eng.fl_str_mv Aequidens Epae
Chordata
Coi Gene
Controlled Study
Copella Callolepis
Dna Barcoding
Fauna
Gene
Gene Sequence
Genetic Distance
Genetic Variability
Intraspecific Distance
Knodus
Nonhuman
River Basin
Stream (river)
Water Supply
Animals
Biodiversity
Brasil
Environmental Protection
Fish
Genetics
Phylogeny
River
Cytochrome C Oxidase
Fish Protein
Animalss
Biodiversity
Brasil
Conservation Of Natural Resources
Dna Barcoding, Taxonomic
Electron Transport Complex Iv
Fish Proteins
Fishes
Phylogeny
Rivers
topic Aequidens Epae
Chordata
Coi Gene
Controlled Study
Copella Callolepis
Dna Barcoding
Fauna
Gene
Gene Sequence
Genetic Distance
Genetic Variability
Intraspecific Distance
Knodus
Nonhuman
River Basin
Stream (river)
Water Supply
Animals
Biodiversity
Brasil
Environmental Protection
Fish
Genetics
Phylogeny
River
Cytochrome C Oxidase
Fish Protein
Animalss
Biodiversity
Brasil
Conservation Of Natural Resources
Dna Barcoding, Taxonomic
Electron Transport Complex Iv
Fish Proteins
Fishes
Phylogeny
Rivers
description The Amazon basin harbors a megadiverse fish fauna spread in an intricate network of big rivers and small streams. The Amazonian streams are home of many small sized fishes that remains poorly documented. In order to accelerate the scientific knowledge on these important aquatic systems we adopted a modern integrative approach joining morphology and molecular tools to investigate the ichthyofauna assemblages from low order streams situated on the lower Tapajós River Basin. Cytochrome c Oxidase I (COI) DNA barcodes from 252 specimens collected from 10 stream sites were obtained. The combined analysis revealed 29 species, 21 genera and 11 families. Cryptic diversity was evidenced in Knodus sp.1, Aequidens epae and Copella callolepis, in which deep genetic divergence were detected (intraspecific distances: 20.48%, 7.99% and 3.77%, respectively). The putative new species showed closer relationships with their counterparts occurring in the Tapajós-Xingu water drainages. © 2018 Guimarães et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
publishDate 2018
dc.date.issued.fl_str_mv 2018
dc.date.accessioned.fl_str_mv 2020-04-24T16:59:57Z
dc.date.available.fl_str_mv 2020-04-24T16:59:57Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/14654
dc.identifier.doi.none.fl_str_mv 10.1371/journal.pone.0209430
url https://repositorio.inpa.gov.br/handle/1/14654
identifier_str_mv 10.1371/journal.pone.0209430
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 13, Número 12
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv PLoS ONE
publisher.none.fl_str_mv PLoS ONE
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
instname:Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron:INPA
instname_str Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron_str INPA
institution INPA
reponame_str Repositório Institucional do INPA
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