DNA barcoding of fish fauna from low order streams of Tapajós River basin
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional do INPA |
Texto Completo: | https://repositorio.inpa.gov.br/handle/1/14654 |
Resumo: | The Amazon basin harbors a megadiverse fish fauna spread in an intricate network of big rivers and small streams. The Amazonian streams are home of many small sized fishes that remains poorly documented. In order to accelerate the scientific knowledge on these important aquatic systems we adopted a modern integrative approach joining morphology and molecular tools to investigate the ichthyofauna assemblages from low order streams situated on the lower Tapajós River Basin. Cytochrome c Oxidase I (COI) DNA barcodes from 252 specimens collected from 10 stream sites were obtained. The combined analysis revealed 29 species, 21 genera and 11 families. Cryptic diversity was evidenced in Knodus sp.1, Aequidens epae and Copella callolepis, in which deep genetic divergence were detected (intraspecific distances: 20.48%, 7.99% and 3.77%, respectively). The putative new species showed closer relationships with their counterparts occurring in the Tapajós-Xingu water drainages. © 2018 Guimarães et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
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Guimarães, Karen Larissa AuzierSousa, Marcos Paulo Alho deRibeiro, Frank Raynner VasconcelosPorto, Jorge Ivan RebeloRodrigues, Luís Reginaldo Ribeiro2020-04-24T16:59:57Z2020-04-24T16:59:57Z2018https://repositorio.inpa.gov.br/handle/1/1465410.1371/journal.pone.0209430The Amazon basin harbors a megadiverse fish fauna spread in an intricate network of big rivers and small streams. The Amazonian streams are home of many small sized fishes that remains poorly documented. In order to accelerate the scientific knowledge on these important aquatic systems we adopted a modern integrative approach joining morphology and molecular tools to investigate the ichthyofauna assemblages from low order streams situated on the lower Tapajós River Basin. Cytochrome c Oxidase I (COI) DNA barcodes from 252 specimens collected from 10 stream sites were obtained. The combined analysis revealed 29 species, 21 genera and 11 families. Cryptic diversity was evidenced in Knodus sp.1, Aequidens epae and Copella callolepis, in which deep genetic divergence were detected (intraspecific distances: 20.48%, 7.99% and 3.77%, respectively). The putative new species showed closer relationships with their counterparts occurring in the Tapajós-Xingu water drainages. © 2018 Guimarães et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Volume 13, Número 12Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAequidens EpaeChordataCoi GeneControlled StudyCopella CallolepisDna BarcodingFaunaGeneGene SequenceGenetic DistanceGenetic VariabilityIntraspecific DistanceKnodusNonhumanRiver BasinStream (river)Water SupplyAnimalsBiodiversityBrasilEnvironmental ProtectionFishGeneticsPhylogenyRiverCytochrome C OxidaseFish ProteinAnimalssBiodiversityBrasilConservation Of Natural ResourcesDna Barcoding, TaxonomicElectron Transport Complex IvFish ProteinsFishesPhylogenyRiversDNA barcoding of fish fauna from low order streams of Tapajós River basininfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePLoS ONEengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf3912483https://repositorio.inpa.gov.br/bitstream/1/14654/1/artigo-inpa.pdfbb2b10af225aec9900919132bd297127MD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/14654/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/146542020-07-14 09:19:01.279oai:repositorio:1/14654Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T13:19:01Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false |
dc.title.en.fl_str_mv |
DNA barcoding of fish fauna from low order streams of Tapajós River basin |
title |
DNA barcoding of fish fauna from low order streams of Tapajós River basin |
spellingShingle |
DNA barcoding of fish fauna from low order streams of Tapajós River basin Guimarães, Karen Larissa Auzier Aequidens Epae Chordata Coi Gene Controlled Study Copella Callolepis Dna Barcoding Fauna Gene Gene Sequence Genetic Distance Genetic Variability Intraspecific Distance Knodus Nonhuman River Basin Stream (river) Water Supply Animals Biodiversity Brasil Environmental Protection Fish Genetics Phylogeny River Cytochrome C Oxidase Fish Protein Animalss Biodiversity Brasil Conservation Of Natural Resources Dna Barcoding, Taxonomic Electron Transport Complex Iv Fish Proteins Fishes Phylogeny Rivers |
title_short |
DNA barcoding of fish fauna from low order streams of Tapajós River basin |
title_full |
DNA barcoding of fish fauna from low order streams of Tapajós River basin |
title_fullStr |
DNA barcoding of fish fauna from low order streams of Tapajós River basin |
title_full_unstemmed |
DNA barcoding of fish fauna from low order streams of Tapajós River basin |
title_sort |
DNA barcoding of fish fauna from low order streams of Tapajós River basin |
author |
Guimarães, Karen Larissa Auzier |
author_facet |
Guimarães, Karen Larissa Auzier Sousa, Marcos Paulo Alho de Ribeiro, Frank Raynner Vasconcelos Porto, Jorge Ivan Rebelo Rodrigues, Luís Reginaldo Ribeiro |
author_role |
author |
author2 |
Sousa, Marcos Paulo Alho de Ribeiro, Frank Raynner Vasconcelos Porto, Jorge Ivan Rebelo Rodrigues, Luís Reginaldo Ribeiro |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Guimarães, Karen Larissa Auzier Sousa, Marcos Paulo Alho de Ribeiro, Frank Raynner Vasconcelos Porto, Jorge Ivan Rebelo Rodrigues, Luís Reginaldo Ribeiro |
dc.subject.eng.fl_str_mv |
Aequidens Epae Chordata Coi Gene Controlled Study Copella Callolepis Dna Barcoding Fauna Gene Gene Sequence Genetic Distance Genetic Variability Intraspecific Distance Knodus Nonhuman River Basin Stream (river) Water Supply Animals Biodiversity Brasil Environmental Protection Fish Genetics Phylogeny River Cytochrome C Oxidase Fish Protein Animalss Biodiversity Brasil Conservation Of Natural Resources Dna Barcoding, Taxonomic Electron Transport Complex Iv Fish Proteins Fishes Phylogeny Rivers |
topic |
Aequidens Epae Chordata Coi Gene Controlled Study Copella Callolepis Dna Barcoding Fauna Gene Gene Sequence Genetic Distance Genetic Variability Intraspecific Distance Knodus Nonhuman River Basin Stream (river) Water Supply Animals Biodiversity Brasil Environmental Protection Fish Genetics Phylogeny River Cytochrome C Oxidase Fish Protein Animalss Biodiversity Brasil Conservation Of Natural Resources Dna Barcoding, Taxonomic Electron Transport Complex Iv Fish Proteins Fishes Phylogeny Rivers |
description |
The Amazon basin harbors a megadiverse fish fauna spread in an intricate network of big rivers and small streams. The Amazonian streams are home of many small sized fishes that remains poorly documented. In order to accelerate the scientific knowledge on these important aquatic systems we adopted a modern integrative approach joining morphology and molecular tools to investigate the ichthyofauna assemblages from low order streams situated on the lower Tapajós River Basin. Cytochrome c Oxidase I (COI) DNA barcodes from 252 specimens collected from 10 stream sites were obtained. The combined analysis revealed 29 species, 21 genera and 11 families. Cryptic diversity was evidenced in Knodus sp.1, Aequidens epae and Copella callolepis, in which deep genetic divergence were detected (intraspecific distances: 20.48%, 7.99% and 3.77%, respectively). The putative new species showed closer relationships with their counterparts occurring in the Tapajós-Xingu water drainages. © 2018 Guimarães et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
publishDate |
2018 |
dc.date.issued.fl_str_mv |
2018 |
dc.date.accessioned.fl_str_mv |
2020-04-24T16:59:57Z |
dc.date.available.fl_str_mv |
2020-04-24T16:59:57Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
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info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://repositorio.inpa.gov.br/handle/1/14654 |
dc.identifier.doi.none.fl_str_mv |
10.1371/journal.pone.0209430 |
url |
https://repositorio.inpa.gov.br/handle/1/14654 |
identifier_str_mv |
10.1371/journal.pone.0209430 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
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Volume 13, Número 12 |
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Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ info:eu-repo/semantics/openAccess |
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Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ |
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openAccess |
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PLoS ONE |
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PLoS ONE |
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