Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction

Detalhes bibliográficos
Autor(a) principal: Neukirchen, Sinje
Data de Publicação: 2023
Outros Autores: Pereira, Inês A.C., Sousa, Filipa L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/158525
Resumo: Funding Information: FLS and SN acknowledge support from the Wiener Wissenschafts, Forschungs- und Technologiefonds (Austria) through the grant VRG15-007. FLS gratefully acknowledges funding from the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation program (grant agreement 803768). IACP acknowledges support from Fundação para a Ciência e Tecnologia (Portugal) through grants PTDC/BIA-MIC/6512/2014 and PTDC/BIA-BQM/29118/2017, R&D unit MOSTMICRO-ITQB (UIDB/04612/2020 and UIDP/04612/2020), and LS4FUTURE Associated Laboratory (LA/P/0087/2020). The computational results of this work have been achieved using the Life Science Compute Cluster (LiSC) of the University of Vienna. Funding Information: FLS and SN acknowledge support from the Wiener Wissenschafts, Forschungs- und Technologiefonds (Austria) through the grant VRG15-007. FLS gratefully acknowledges funding from the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation program (grant agreement 803768). IACP acknowledges support from Fundação para a Ciência e Tecnologia (Portugal) through grants PTDC/BIA-MIC/6512/2014 and PTDC/BIA-BQM/29118/2017, R&D unit MOSTMICRO-ITQB (UIDB/04612/2020 and UIDP/04612/2020), and LS4FUTURE Associated Laboratory (LA/P/0087/2020). The computational results of this work have been achieved using the Life Science Compute Cluster (LiSC) of the University of Vienna. Publisher Copyright: © 2023, The Author(s).
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spelling Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reductionMicrobiologyEcology, Evolution, Behavior and SystematicsFunding Information: FLS and SN acknowledge support from the Wiener Wissenschafts, Forschungs- und Technologiefonds (Austria) through the grant VRG15-007. FLS gratefully acknowledges funding from the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation program (grant agreement 803768). IACP acknowledges support from Fundação para a Ciência e Tecnologia (Portugal) through grants PTDC/BIA-MIC/6512/2014 and PTDC/BIA-BQM/29118/2017, R&D unit MOSTMICRO-ITQB (UIDB/04612/2020 and UIDP/04612/2020), and LS4FUTURE Associated Laboratory (LA/P/0087/2020). The computational results of this work have been achieved using the Life Science Compute Cluster (LiSC) of the University of Vienna. Funding Information: FLS and SN acknowledge support from the Wiener Wissenschafts, Forschungs- und Technologiefonds (Austria) through the grant VRG15-007. FLS gratefully acknowledges funding from the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation program (grant agreement 803768). IACP acknowledges support from Fundação para a Ciência e Tecnologia (Portugal) through grants PTDC/BIA-MIC/6512/2014 and PTDC/BIA-BQM/29118/2017, R&D unit MOSTMICRO-ITQB (UIDB/04612/2020 and UIDP/04612/2020), and LS4FUTURE Associated Laboratory (LA/P/0087/2020). The computational results of this work have been achieved using the Life Science Compute Cluster (LiSC) of the University of Vienna. Publisher Copyright: © 2023, The Author(s).Microbial dissimilatory sulfur metabolism utilizing dissimilatory sulfite reductases (Dsr) influenced the biochemical sulfur cycle during Earth’s history and the Dsr pathway is thought to be an ancient metabolic process. Here we performed comparative genomics, phylogenetic, and synteny analyses of several Dsr proteins involved in or associated with the Dsr pathway across over 195,000 prokaryotic metagenomes. The results point to an archaeal origin of the minimal DsrABCMK(N) protein set, having as primordial function sulfite reduction. The acquisition of additional Dsr proteins (DsrJOPT) increased the Dsr pathway complexity. Archaeoglobus would originally possess the archaeal-type Dsr pathway and the archaeal DsrAB proteins were replaced with the bacterial reductive-type version, possibly at the same time as the acquisition of the QmoABC and DsrD proteins. Further inventions of two Qmo complex types, which are more spread than previously thought, allowed microorganisms to use sulfate as electron acceptor. The ability to use the Dsr pathway for sulfur oxidation evolved at least twice, with Chlorobi and Proteobacteria being extant descendants of these two independent adaptations.Instituto de Tecnologia Química e Biológica António Xavier (ITQB)RUNNeukirchen, SinjePereira, Inês A.C.Sousa, Filipa L.2023-09-30T22:18:53Z20232023-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10362/158525eng1751-7362PURE: 72373268https://doi.org/10.1038/s41396-023-01477-yinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T05:41:00Zoai:run.unl.pt:10362/158525Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:57:11.300214Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
title Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
spellingShingle Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
Neukirchen, Sinje
Microbiology
Ecology, Evolution, Behavior and Systematics
title_short Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
title_full Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
title_fullStr Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
title_full_unstemmed Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
title_sort Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
author Neukirchen, Sinje
author_facet Neukirchen, Sinje
Pereira, Inês A.C.
Sousa, Filipa L.
author_role author
author2 Pereira, Inês A.C.
Sousa, Filipa L.
author2_role author
author
dc.contributor.none.fl_str_mv Instituto de Tecnologia Química e Biológica António Xavier (ITQB)
RUN
dc.contributor.author.fl_str_mv Neukirchen, Sinje
Pereira, Inês A.C.
Sousa, Filipa L.
dc.subject.por.fl_str_mv Microbiology
Ecology, Evolution, Behavior and Systematics
topic Microbiology
Ecology, Evolution, Behavior and Systematics
description Funding Information: FLS and SN acknowledge support from the Wiener Wissenschafts, Forschungs- und Technologiefonds (Austria) through the grant VRG15-007. FLS gratefully acknowledges funding from the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation program (grant agreement 803768). IACP acknowledges support from Fundação para a Ciência e Tecnologia (Portugal) through grants PTDC/BIA-MIC/6512/2014 and PTDC/BIA-BQM/29118/2017, R&D unit MOSTMICRO-ITQB (UIDB/04612/2020 and UIDP/04612/2020), and LS4FUTURE Associated Laboratory (LA/P/0087/2020). The computational results of this work have been achieved using the Life Science Compute Cluster (LiSC) of the University of Vienna. Funding Information: FLS and SN acknowledge support from the Wiener Wissenschafts, Forschungs- und Technologiefonds (Austria) through the grant VRG15-007. FLS gratefully acknowledges funding from the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation program (grant agreement 803768). IACP acknowledges support from Fundação para a Ciência e Tecnologia (Portugal) through grants PTDC/BIA-MIC/6512/2014 and PTDC/BIA-BQM/29118/2017, R&D unit MOSTMICRO-ITQB (UIDB/04612/2020 and UIDP/04612/2020), and LS4FUTURE Associated Laboratory (LA/P/0087/2020). The computational results of this work have been achieved using the Life Science Compute Cluster (LiSC) of the University of Vienna. Publisher Copyright: © 2023, The Author(s).
publishDate 2023
dc.date.none.fl_str_mv 2023-09-30T22:18:53Z
2023
2023-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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url http://hdl.handle.net/10362/158525
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1751-7362
PURE: 72373268
https://doi.org/10.1038/s41396-023-01477-y
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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