A systematic review of asthma phenotypes derived by data-driven methods

Detalhes bibliográficos
Autor(a) principal: Cunha, Francisco
Data de Publicação: 2021
Outros Autores: Amaral, Rita, Jacinto, Tiago, Sousa-Pinto, Bernardo, Fonseca, João A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.22/18090
Resumo: Classification of asthma phenotypes has a potentially relevant impact on the clinical management of the disease. Methods for statistical classification without a priori assumptions (data-driven approaches) may contribute to developing a better comprehension of trait heterogeneity in disease phenotyping. This study aimed to summarize and characterize asthma phenotypes derived by data-driven methods. We performed a systematic review using three scientific databases, following Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) criteria. We included studies reporting adult asthma phenotypes derived by data-driven methods using easily accessible variables in clinical practice. Two independent reviewers assessed studies. The methodological quality of included primary studies was assessed using the ROBINS-I tool. We retrieved 7446 results and included 68 studies of which 65% (n = 44) used data from specialized centers and 53% (n = 36) evaluated the consistency of phenotypes. The most frequent data-driven method was hierarchical cluster analysis (n = 19). Three major asthma-related domains of easily measurable clinical variables used for phenotyping were identified: personal (n = 49), functional (n = 48) and clinical (n = 47). The identified asthma phenotypes varied according to the sample's characteristics, variables included in the model, and data availability. Overall, the most frequent phenotypes were related to atopy, gender, and severe disease. This review shows a large variability of asthma phenotypes derived from data-driven methods. Further research should include more population-based samples and assess longitudinal consistency of data-driven phenotypes.
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spelling A systematic review of asthma phenotypes derived by data-driven methodsAsthmaPhenotypesSystematic reviewsUnsupervised analysisClassification of asthma phenotypes has a potentially relevant impact on the clinical management of the disease. Methods for statistical classification without a priori assumptions (data-driven approaches) may contribute to developing a better comprehension of trait heterogeneity in disease phenotyping. This study aimed to summarize and characterize asthma phenotypes derived by data-driven methods. We performed a systematic review using three scientific databases, following Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) criteria. We included studies reporting adult asthma phenotypes derived by data-driven methods using easily accessible variables in clinical practice. Two independent reviewers assessed studies. The methodological quality of included primary studies was assessed using the ROBINS-I tool. We retrieved 7446 results and included 68 studies of which 65% (n = 44) used data from specialized centers and 53% (n = 36) evaluated the consistency of phenotypes. The most frequent data-driven method was hierarchical cluster analysis (n = 19). Three major asthma-related domains of easily measurable clinical variables used for phenotyping were identified: personal (n = 49), functional (n = 48) and clinical (n = 47). The identified asthma phenotypes varied according to the sample's characteristics, variables included in the model, and data availability. Overall, the most frequent phenotypes were related to atopy, gender, and severe disease. This review shows a large variability of asthma phenotypes derived from data-driven methods. Further research should include more population-based samples and assess longitudinal consistency of data-driven phenotypes.MDPIRepositório Científico do Instituto Politécnico do PortoCunha, FranciscoAmaral, RitaJacinto, TiagoSousa-Pinto, BernardoFonseca, João A.2021-07-06T13:53:05Z2021-04-022021-04-02T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.22/18090engCunha, F., Amaral, R., Jacinto, T., Sousa-Pinto, B., & Fonseca, J. A. (2021). A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods. Diagnostics, 11(4). https://doi.org/10.3390/diagnostics110406442075-441810.3390/diagnostics11040644info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-03-13T13:09:20Zoai:recipp.ipp.pt:10400.22/18090Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T17:37:41.249026Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A systematic review of asthma phenotypes derived by data-driven methods
title A systematic review of asthma phenotypes derived by data-driven methods
spellingShingle A systematic review of asthma phenotypes derived by data-driven methods
Cunha, Francisco
Asthma
Phenotypes
Systematic reviews
Unsupervised analysis
title_short A systematic review of asthma phenotypes derived by data-driven methods
title_full A systematic review of asthma phenotypes derived by data-driven methods
title_fullStr A systematic review of asthma phenotypes derived by data-driven methods
title_full_unstemmed A systematic review of asthma phenotypes derived by data-driven methods
title_sort A systematic review of asthma phenotypes derived by data-driven methods
author Cunha, Francisco
author_facet Cunha, Francisco
Amaral, Rita
Jacinto, Tiago
Sousa-Pinto, Bernardo
Fonseca, João A.
author_role author
author2 Amaral, Rita
Jacinto, Tiago
Sousa-Pinto, Bernardo
Fonseca, João A.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Politécnico do Porto
dc.contributor.author.fl_str_mv Cunha, Francisco
Amaral, Rita
Jacinto, Tiago
Sousa-Pinto, Bernardo
Fonseca, João A.
dc.subject.por.fl_str_mv Asthma
Phenotypes
Systematic reviews
Unsupervised analysis
topic Asthma
Phenotypes
Systematic reviews
Unsupervised analysis
description Classification of asthma phenotypes has a potentially relevant impact on the clinical management of the disease. Methods for statistical classification without a priori assumptions (data-driven approaches) may contribute to developing a better comprehension of trait heterogeneity in disease phenotyping. This study aimed to summarize and characterize asthma phenotypes derived by data-driven methods. We performed a systematic review using three scientific databases, following Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) criteria. We included studies reporting adult asthma phenotypes derived by data-driven methods using easily accessible variables in clinical practice. Two independent reviewers assessed studies. The methodological quality of included primary studies was assessed using the ROBINS-I tool. We retrieved 7446 results and included 68 studies of which 65% (n = 44) used data from specialized centers and 53% (n = 36) evaluated the consistency of phenotypes. The most frequent data-driven method was hierarchical cluster analysis (n = 19). Three major asthma-related domains of easily measurable clinical variables used for phenotyping were identified: personal (n = 49), functional (n = 48) and clinical (n = 47). The identified asthma phenotypes varied according to the sample's characteristics, variables included in the model, and data availability. Overall, the most frequent phenotypes were related to atopy, gender, and severe disease. This review shows a large variability of asthma phenotypes derived from data-driven methods. Further research should include more population-based samples and assess longitudinal consistency of data-driven phenotypes.
publishDate 2021
dc.date.none.fl_str_mv 2021-07-06T13:53:05Z
2021-04-02
2021-04-02T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.22/18090
url http://hdl.handle.net/10400.22/18090
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Cunha, F., Amaral, R., Jacinto, T., Sousa-Pinto, B., & Fonseca, J. A. (2021). A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods. Diagnostics, 11(4). https://doi.org/10.3390/diagnostics11040644
2075-4418
10.3390/diagnostics11040644
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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