Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/1822/60437 |
Resumo: | Growing antimicrobial resistance and biofilm infection resilience have led researchers to study the potential laying in antimicrobial combinations, including those encompassing enzymes with biofilm disrupting abilities. Therefore, this work set out to evaluate the undergone journey of antimicrobial enzyme combination research and gain insights into its current status and most promising leads. Expert curators annotated and analysed all published experimental data on enzyme-encompassing combinations for two major biofilm-forming pathogens, Pseudomonas aeruginosa and Staphylococcus aureus. This entailed the construction of the first publically accessible online database on antimicrobial enzyme combinations, the Antimicrobial Enzyme Combinations Database (www.ceb.uminho.pt/aecd). Gathered data was also reconstructed as knowledge-networks to help analyse and visualize annotated entities (e.g. enzymes, methods, strains, combination outputs). The database currently holds 122 and 206 annotated combinations for P. aeruginosa and S. aureus, respectively, and their analysis allowed a systematic review of the available evidence on enzyme combinations, reliably illustrating the studies being performed. The most tested enzymes (e.g. lysozyme, DNAse, lysostaphin) were scrutinised and the rationale behind each combination explained. This research area is still growing even though current research gaps/opportunities were identified, such as lack of biofilm testing and of studies on polymicrobial scenarios. Hopefully, this work will shed light on the synergetic potential resting in enzyme combinations and alleviate some of the time and resource-consuming tasks related to enzyme combination research by helping the selection and design of new enzyme related therapeutic options for P. aeruginosa and S. aureus infections. |
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Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureusAntimicrobial combinationsEnzymesPseudomonas aeruginosaStaphylococcus aureusDatabaseScience & TechnologyGrowing antimicrobial resistance and biofilm infection resilience have led researchers to study the potential laying in antimicrobial combinations, including those encompassing enzymes with biofilm disrupting abilities. Therefore, this work set out to evaluate the undergone journey of antimicrobial enzyme combination research and gain insights into its current status and most promising leads. Expert curators annotated and analysed all published experimental data on enzyme-encompassing combinations for two major biofilm-forming pathogens, Pseudomonas aeruginosa and Staphylococcus aureus. This entailed the construction of the first publically accessible online database on antimicrobial enzyme combinations, the Antimicrobial Enzyme Combinations Database (www.ceb.uminho.pt/aecd). Gathered data was also reconstructed as knowledge-networks to help analyse and visualize annotated entities (e.g. enzymes, methods, strains, combination outputs). The database currently holds 122 and 206 annotated combinations for P. aeruginosa and S. aureus, respectively, and their analysis allowed a systematic review of the available evidence on enzyme combinations, reliably illustrating the studies being performed. The most tested enzymes (e.g. lysozyme, DNAse, lysostaphin) were scrutinised and the rationale behind each combination explained. This research area is still growing even though current research gaps/opportunities were identified, such as lack of biofilm testing and of studies on polymicrobial scenarios. Hopefully, this work will shed light on the synergetic potential resting in enzyme combinations and alleviate some of the time and resource-consuming tasks related to enzyme combination research by helping the selection and design of new enzyme related therapeutic options for P. aeruginosa and S. aureus infections.This work was supported by the Portuguese Foundation for Science and Technology (FCT) under the scope of the strategic funding of UID/BIO/04469 unit and COMPETE 2020 [POCI-01-0145-FEDER-006684] and BioTecNorte operation [NORTE-01-0145-FEDER-000004], funded by the European Regional Development Fund under the scope of Norte2020 - Programa Operacional Regional do Norte. The authors also recognise COMPETE2020 and FCT for the project POCI-01-0145-FEDER-029841.info:eu-repo/semantics/publishedVersionElsevierUniversidade do MinhoJorge, Paula Alexandra SilvaAlves, DianaPereira, Maria Olívia2019-052019-05-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/60437engJorge, Paula; Alves, Diana; Pereira, Maria Olívia, Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus. International Journal of Antimicrobial Agents, 53(5), 598-605, 20190924-85791872-791310.1016/j.ijantimicag.2019.01.00130639529info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:53:43Zoai:repositorium.sdum.uminho.pt:1822/60437Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:53:07.988684Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus |
title |
Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus |
spellingShingle |
Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus Jorge, Paula Alexandra Silva Antimicrobial combinations Enzymes Pseudomonas aeruginosa Staphylococcus aureus Database Science & Technology |
title_short |
Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus |
title_full |
Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus |
title_fullStr |
Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus |
title_full_unstemmed |
Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus |
title_sort |
Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus |
author |
Jorge, Paula Alexandra Silva |
author_facet |
Jorge, Paula Alexandra Silva Alves, Diana Pereira, Maria Olívia |
author_role |
author |
author2 |
Alves, Diana Pereira, Maria Olívia |
author2_role |
author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Jorge, Paula Alexandra Silva Alves, Diana Pereira, Maria Olívia |
dc.subject.por.fl_str_mv |
Antimicrobial combinations Enzymes Pseudomonas aeruginosa Staphylococcus aureus Database Science & Technology |
topic |
Antimicrobial combinations Enzymes Pseudomonas aeruginosa Staphylococcus aureus Database Science & Technology |
description |
Growing antimicrobial resistance and biofilm infection resilience have led researchers to study the potential laying in antimicrobial combinations, including those encompassing enzymes with biofilm disrupting abilities. Therefore, this work set out to evaluate the undergone journey of antimicrobial enzyme combination research and gain insights into its current status and most promising leads. Expert curators annotated and analysed all published experimental data on enzyme-encompassing combinations for two major biofilm-forming pathogens, Pseudomonas aeruginosa and Staphylococcus aureus. This entailed the construction of the first publically accessible online database on antimicrobial enzyme combinations, the Antimicrobial Enzyme Combinations Database (www.ceb.uminho.pt/aecd). Gathered data was also reconstructed as knowledge-networks to help analyse and visualize annotated entities (e.g. enzymes, methods, strains, combination outputs). The database currently holds 122 and 206 annotated combinations for P. aeruginosa and S. aureus, respectively, and their analysis allowed a systematic review of the available evidence on enzyme combinations, reliably illustrating the studies being performed. The most tested enzymes (e.g. lysozyme, DNAse, lysostaphin) were scrutinised and the rationale behind each combination explained. This research area is still growing even though current research gaps/opportunities were identified, such as lack of biofilm testing and of studies on polymicrobial scenarios. Hopefully, this work will shed light on the synergetic potential resting in enzyme combinations and alleviate some of the time and resource-consuming tasks related to enzyme combination research by helping the selection and design of new enzyme related therapeutic options for P. aeruginosa and S. aureus infections. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-05 2019-05-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/60437 |
url |
http://hdl.handle.net/1822/60437 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Jorge, Paula; Alves, Diana; Pereira, Maria Olívia, Catalysing the way towards antimicrobial effectiveness: A systematic analysis and a new online resource for antimicrobialenzyme combinations against Pseudomonas aeruginosa and Staphylococcus aureus. International Journal of Antimicrobial Agents, 53(5), 598-605, 2019 0924-8579 1872-7913 10.1016/j.ijantimicag.2019.01.001 30639529 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier |
publisher.none.fl_str_mv |
Elsevier |
dc.source.none.fl_str_mv |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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