Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm

Detalhes bibliográficos
Autor(a) principal: Pinto, Mauro F.
Data de Publicação: 2022
Outros Autores: Coelho, Tiago, Leal, Adriana, Lopes, Fábio, Dourado, António, Martins, Pedro, Teixeira, César A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/103491
https://doi.org/10.1038/s41598-022-08322-w
Resumo: Seizure prediction might be the solution to tackle the apparent unpredictability of seizures in patients with drug-resistant epilepsy, which comprise about a third of all patients with epilepsy. Designing seizure prediction models involves defining the pre-ictal period, a transition stage between interictal brain activity and the seizure discharge. This period is typically a fixed interval, with some recent studies reporting the evaluation of different patient-specific pre-ictal intervals. Recently, researchers have aimed to determine the pre-ictal period, a transition stage between regular brain activity and a seizure. Authors have been using deep learning models given the ability of such models to automatically perform pre-processing, feature extraction, classification, and handling temporal and spatial dependencies. As these approaches create black-box models, clinicians may not have sufficient trust to use them in high-stake decisions. By considering these problems, we developed an evolutionary seizure prediction model that identifies the best set of features while automatically searching for the pre-ictal period and accounting for patient comfort. This methodology provides patient-specific interpretable insights, which might contribute to a better understanding of seizure generation processes and explain the algorithm’s decisions. We tested our methodology on 238 seizures and 3687 h of continuous data, recorded on scalp recordings from 93 patients with several types of focal and generalised epilepsies. We compared the results with a seizure surrogate predictor and obtained a performance above chance for 32% patients. We also compared our results with a control method based on the standard machine learning pipeline (pre-processing, feature extraction, classifier training, and post-processing), where the control marginally outperformed our approach by validating 35% of the patients. In total, 54 patients performed above chance for at least one method: our methodology or the control one. Of these 54 patients, 21 ( 38%) were solely validated by our methodology, while 24 ( 44%) were only validated by the control method. These findings may evidence the need for different methodologies concerning different patients.
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spelling Interpretable EEG seizure prediction using a multiobjective evolutionary algorithmSeizure prediction might be the solution to tackle the apparent unpredictability of seizures in patients with drug-resistant epilepsy, which comprise about a third of all patients with epilepsy. Designing seizure prediction models involves defining the pre-ictal period, a transition stage between interictal brain activity and the seizure discharge. This period is typically a fixed interval, with some recent studies reporting the evaluation of different patient-specific pre-ictal intervals. Recently, researchers have aimed to determine the pre-ictal period, a transition stage between regular brain activity and a seizure. Authors have been using deep learning models given the ability of such models to automatically perform pre-processing, feature extraction, classification, and handling temporal and spatial dependencies. As these approaches create black-box models, clinicians may not have sufficient trust to use them in high-stake decisions. By considering these problems, we developed an evolutionary seizure prediction model that identifies the best set of features while automatically searching for the pre-ictal period and accounting for patient comfort. This methodology provides patient-specific interpretable insights, which might contribute to a better understanding of seizure generation processes and explain the algorithm’s decisions. We tested our methodology on 238 seizures and 3687 h of continuous data, recorded on scalp recordings from 93 patients with several types of focal and generalised epilepsies. We compared the results with a seizure surrogate predictor and obtained a performance above chance for 32% patients. We also compared our results with a control method based on the standard machine learning pipeline (pre-processing, feature extraction, classifier training, and post-processing), where the control marginally outperformed our approach by validating 35% of the patients. In total, 54 patients performed above chance for at least one method: our methodology or the control one. Of these 54 patients, 21 ( 38%) were solely validated by our methodology, while 24 ( 44%) were only validated by the control method. These findings may evidence the need for different methodologies concerning different patients.Nature Research2022info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/103491http://hdl.handle.net/10316/103491https://doi.org/10.1038/s41598-022-08322-weng2045-2322Pinto, Mauro F.Coelho, TiagoLeal, AdrianaLopes, FábioDourado, AntónioMartins, PedroTeixeira, César A.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-16T21:35:47Zoai:estudogeral.uc.pt:10316/103491Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:20:19.105198Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
spellingShingle Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
Pinto, Mauro F.
title_short Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_full Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_fullStr Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_full_unstemmed Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_sort Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
author Pinto, Mauro F.
author_facet Pinto, Mauro F.
Coelho, Tiago
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
author_role author
author2 Coelho, Tiago
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Pinto, Mauro F.
Coelho, Tiago
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
description Seizure prediction might be the solution to tackle the apparent unpredictability of seizures in patients with drug-resistant epilepsy, which comprise about a third of all patients with epilepsy. Designing seizure prediction models involves defining the pre-ictal period, a transition stage between interictal brain activity and the seizure discharge. This period is typically a fixed interval, with some recent studies reporting the evaluation of different patient-specific pre-ictal intervals. Recently, researchers have aimed to determine the pre-ictal period, a transition stage between regular brain activity and a seizure. Authors have been using deep learning models given the ability of such models to automatically perform pre-processing, feature extraction, classification, and handling temporal and spatial dependencies. As these approaches create black-box models, clinicians may not have sufficient trust to use them in high-stake decisions. By considering these problems, we developed an evolutionary seizure prediction model that identifies the best set of features while automatically searching for the pre-ictal period and accounting for patient comfort. This methodology provides patient-specific interpretable insights, which might contribute to a better understanding of seizure generation processes and explain the algorithm’s decisions. We tested our methodology on 238 seizures and 3687 h of continuous data, recorded on scalp recordings from 93 patients with several types of focal and generalised epilepsies. We compared the results with a seizure surrogate predictor and obtained a performance above chance for 32% patients. We also compared our results with a control method based on the standard machine learning pipeline (pre-processing, feature extraction, classifier training, and post-processing), where the control marginally outperformed our approach by validating 35% of the patients. In total, 54 patients performed above chance for at least one method: our methodology or the control one. Of these 54 patients, 21 ( 38%) were solely validated by our methodology, while 24 ( 44%) were only validated by the control method. These findings may evidence the need for different methodologies concerning different patients.
publishDate 2022
dc.date.none.fl_str_mv 2022
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/103491
http://hdl.handle.net/10316/103491
https://doi.org/10.1038/s41598-022-08322-w
url http://hdl.handle.net/10316/103491
https://doi.org/10.1038/s41598-022-08322-w
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