A user-friendly software to easily count Anopheles egg batches

Detalhes bibliográficos
Autor(a) principal: Mollahosseini, Ali
Data de Publicação: 2012
Outros Autores: Rossignol, Marie, Pennetier, Cédric, Cohuet, Anna, Anjos, António dos, Chandre, Fabrice, Shahbazkia, Hamid Reza
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/1865
Resumo: Studies on malaria vector ecology and development/evaluation of vector control strategies often require measures of mosquito life history traits. Assessing the fecundity of malaria vectors can be carried out by counting eggs laid by Anopheles females. However, manually counting the eggs is time consuming, tedious, and error prone. Methods In this paper we present a newly developed software for high precision automatic egg counting. The software written in the Java programming language proposes a user-friendly interface and a complete online manual. It allows the inspection of results by the operator and includes proper tools for manual corrections. The user can in fact correct any details on the acquired results by a mouse click. Time saving is significant and errors due to loss of concentration are avoided. Results The software was tested over 16 randomly chosen images from 2 different experiments. The results show that the proposed automatic method produces results that are close to the ground truth. Conclusions The proposed approaches demonstrated a very high level of robustness. The adoption of the proposed software package will save many hours of labor to the bench scientist. The software needs no particular configuration and is freely available for download on: http://w3.ualg.pt/∼hshah/eggcounter/.
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spelling A user-friendly software to easily count Anopheles egg batchesStudies on malaria vector ecology and development/evaluation of vector control strategies often require measures of mosquito life history traits. Assessing the fecundity of malaria vectors can be carried out by counting eggs laid by Anopheles females. However, manually counting the eggs is time consuming, tedious, and error prone. Methods In this paper we present a newly developed software for high precision automatic egg counting. The software written in the Java programming language proposes a user-friendly interface and a complete online manual. It allows the inspection of results by the operator and includes proper tools for manual corrections. The user can in fact correct any details on the acquired results by a mouse click. Time saving is significant and errors due to loss of concentration are avoided. Results The software was tested over 16 randomly chosen images from 2 different experiments. The results show that the proposed automatic method produces results that are close to the ground truth. Conclusions The proposed approaches demonstrated a very high level of robustness. The adoption of the proposed software package will save many hours of labor to the bench scientist. The software needs no particular configuration and is freely available for download on: http://w3.ualg.pt/∼hshah/eggcounter/.BiomedCentralSapientiaMollahosseini, AliRossignol, MariePennetier, CédricCohuet, AnnaAnjos, António dosChandre, FabriceShahbazkia, Hamid Reza2012-11-22T22:51:33Z2012-06-192012-10-17T06:14:05Z2012-06-19T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articletext/xmlapplication/pdfhttp://hdl.handle.net/10400.1/1865engParasites & Vectors. 2012 Jun 19;5(1):12210.1186/1756-3305-5-122info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:12:55Zoai:sapientia.ualg.pt:10400.1/1865Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:55:53.311803Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A user-friendly software to easily count Anopheles egg batches
title A user-friendly software to easily count Anopheles egg batches
spellingShingle A user-friendly software to easily count Anopheles egg batches
Mollahosseini, Ali
title_short A user-friendly software to easily count Anopheles egg batches
title_full A user-friendly software to easily count Anopheles egg batches
title_fullStr A user-friendly software to easily count Anopheles egg batches
title_full_unstemmed A user-friendly software to easily count Anopheles egg batches
title_sort A user-friendly software to easily count Anopheles egg batches
author Mollahosseini, Ali
author_facet Mollahosseini, Ali
Rossignol, Marie
Pennetier, Cédric
Cohuet, Anna
Anjos, António dos
Chandre, Fabrice
Shahbazkia, Hamid Reza
author_role author
author2 Rossignol, Marie
Pennetier, Cédric
Cohuet, Anna
Anjos, António dos
Chandre, Fabrice
Shahbazkia, Hamid Reza
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Mollahosseini, Ali
Rossignol, Marie
Pennetier, Cédric
Cohuet, Anna
Anjos, António dos
Chandre, Fabrice
Shahbazkia, Hamid Reza
description Studies on malaria vector ecology and development/evaluation of vector control strategies often require measures of mosquito life history traits. Assessing the fecundity of malaria vectors can be carried out by counting eggs laid by Anopheles females. However, manually counting the eggs is time consuming, tedious, and error prone. Methods In this paper we present a newly developed software for high precision automatic egg counting. The software written in the Java programming language proposes a user-friendly interface and a complete online manual. It allows the inspection of results by the operator and includes proper tools for manual corrections. The user can in fact correct any details on the acquired results by a mouse click. Time saving is significant and errors due to loss of concentration are avoided. Results The software was tested over 16 randomly chosen images from 2 different experiments. The results show that the proposed automatic method produces results that are close to the ground truth. Conclusions The proposed approaches demonstrated a very high level of robustness. The adoption of the proposed software package will save many hours of labor to the bench scientist. The software needs no particular configuration and is freely available for download on: http://w3.ualg.pt/∼hshah/eggcounter/.
publishDate 2012
dc.date.none.fl_str_mv 2012-11-22T22:51:33Z
2012-06-19
2012-10-17T06:14:05Z
2012-06-19T00:00:00Z
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/1865
url http://hdl.handle.net/10400.1/1865
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Parasites & Vectors. 2012 Jun 19;5(1):122
10.1186/1756-3305-5-122
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dc.publisher.none.fl_str_mv BiomedCentral
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