Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea

Detalhes bibliográficos
Autor(a) principal: Oni, Oluwatobi
Data de Publicação: 2015
Outros Autores: Miyatake, Tetsuro, Kasten, Sabine, Richter-Heitmann, Tim, Fischer, David, Wagenknecht, Laura, Kulkarni, Ajinkya, Blumers, Mathias, Shylin, Sergii I., Ksenofontov, Vadim, Costa, Benilde F. O., Klingelhöfer, Göstar, Friedrich, Michael W.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/109151
https://doi.org/10.3389/fmicb.2015.00365
Resumo: Iron reduction in subseafloor sulfate-depleted and methane-rich marine sediments is currently a subject of interest in subsurface geomicrobiology. While iron reduction and microorganisms involved have been well studied in marine surface sediments, little is known about microorganisms responsible for iron reduction in deep methanic sediments. Here, we used quantitative PCR-based 16S rRNA gene copy numbers and pyrosequencing-based relative abundances of bacteria and archaea to investigate covariance between distinct microbial populations and specific geochemical profiles in the top 5 m of sediment cores from the Helgoland mud area, North Sea. We found that gene copy numbers of bacteria and archaea were specifically higher around the peak of dissolved iron in the methanic zone (250-350 cm). The higher copy numbers at these depths were also reflected by the relative sequence abundances of members of the candidate division JS1, methanogenic and Methanohalobium/ANME-3 related archaea. The distribution of these populations was strongly correlated to the profile of pore-water Fe(2+) while that of Desulfobacteraceae corresponded to the pore-water sulfate profile. Furthermore, specific JS1 populations also strongly co-varied with the distribution of Methanosaetaceae in the methanic zone. Our data suggest that the interplay among JS1 bacteria, methanogenic archaea and Methanohalobium/ANME-3-related archaea may be important for iron reduction and methane cycling in deep methanic sediments of the Helgoland mud area and perhaps in other methane-rich depositional environments.
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spelling Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Seacandidate division JS1iron reductionmethanogensANMEsubsurface sedimentsNorthSeaSMTanaerobic oxidation of methaneIron reduction in subseafloor sulfate-depleted and methane-rich marine sediments is currently a subject of interest in subsurface geomicrobiology. While iron reduction and microorganisms involved have been well studied in marine surface sediments, little is known about microorganisms responsible for iron reduction in deep methanic sediments. Here, we used quantitative PCR-based 16S rRNA gene copy numbers and pyrosequencing-based relative abundances of bacteria and archaea to investigate covariance between distinct microbial populations and specific geochemical profiles in the top 5 m of sediment cores from the Helgoland mud area, North Sea. We found that gene copy numbers of bacteria and archaea were specifically higher around the peak of dissolved iron in the methanic zone (250-350 cm). The higher copy numbers at these depths were also reflected by the relative sequence abundances of members of the candidate division JS1, methanogenic and Methanohalobium/ANME-3 related archaea. The distribution of these populations was strongly correlated to the profile of pore-water Fe(2+) while that of Desulfobacteraceae corresponded to the pore-water sulfate profile. Furthermore, specific JS1 populations also strongly co-varied with the distribution of Methanosaetaceae in the methanic zone. Our data suggest that the interplay among JS1 bacteria, methanogenic archaea and Methanohalobium/ANME-3-related archaea may be important for iron reduction and methane cycling in deep methanic sediments of the Helgoland mud area and perhaps in other methane-rich depositional environments.ThisstudywassupportedbytheResearchCenter/Clusterof Excellence‘TheOceanintheEarthSystem’(MARUM)funded bytheDeutscheForschungsgemeinschaft(DFG)andbythe UniversityofBremen.Theauthorsthankthecaptain,crew,and scientistsofR/VHEINCKEexpeditionsHE376,HE406,and HE421. WealsothankthecaptainandcrewofRVUTHÖRN fortheirhelpduringUT-2012sampling.Inaddition,wethank BenjaminLöfflerandRoiMartinezfortheirhelpwithon- boardgeochemicalmeasurementsandcreationofthemapof theHelgolandmudarea,respectively.Weacknowledgeaddi- tionalfundingbytheHelmholtzAssociation(AlfredWegener InstituteHelmholtzCentreforPolarandMarineResearch) in theframeworkoftheresearchprogramsPACESIand PACESII.BCgratefullyacknowledgestheFCT/COMPETEPEst- C/FIS/UI0036/2011project.Frontiers Media S.A.2015info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/109151http://hdl.handle.net/10316/109151https://doi.org/10.3389/fmicb.2015.00365eng1664-302X25983723Oni, OluwatobiMiyatake, TetsuroKasten, SabineRichter-Heitmann, TimFischer, DavidWagenknecht, LauraKulkarni, AjinkyaBlumers, MathiasShylin, Sergii I.Ksenofontov, VadimCosta, Benilde F. O.Klingelhöfer, GöstarFriedrich, Michael W.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-09-29T08:27:49Zoai:estudogeral.uc.pt:10316/109151Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:25:20.975010Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea
title Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea
spellingShingle Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea
Oni, Oluwatobi
candidate division JS1
iron reduction
methanogens
ANME
subsurface sediments
NorthSea
SMT
anaerobic oxidation of methane
title_short Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea
title_full Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea
title_fullStr Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea
title_full_unstemmed Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea
title_sort Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea
author Oni, Oluwatobi
author_facet Oni, Oluwatobi
Miyatake, Tetsuro
Kasten, Sabine
Richter-Heitmann, Tim
Fischer, David
Wagenknecht, Laura
Kulkarni, Ajinkya
Blumers, Mathias
Shylin, Sergii I.
Ksenofontov, Vadim
Costa, Benilde F. O.
Klingelhöfer, Göstar
Friedrich, Michael W.
author_role author
author2 Miyatake, Tetsuro
Kasten, Sabine
Richter-Heitmann, Tim
Fischer, David
Wagenknecht, Laura
Kulkarni, Ajinkya
Blumers, Mathias
Shylin, Sergii I.
Ksenofontov, Vadim
Costa, Benilde F. O.
Klingelhöfer, Göstar
Friedrich, Michael W.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Oni, Oluwatobi
Miyatake, Tetsuro
Kasten, Sabine
Richter-Heitmann, Tim
Fischer, David
Wagenknecht, Laura
Kulkarni, Ajinkya
Blumers, Mathias
Shylin, Sergii I.
Ksenofontov, Vadim
Costa, Benilde F. O.
Klingelhöfer, Göstar
Friedrich, Michael W.
dc.subject.por.fl_str_mv candidate division JS1
iron reduction
methanogens
ANME
subsurface sediments
NorthSea
SMT
anaerobic oxidation of methane
topic candidate division JS1
iron reduction
methanogens
ANME
subsurface sediments
NorthSea
SMT
anaerobic oxidation of methane
description Iron reduction in subseafloor sulfate-depleted and methane-rich marine sediments is currently a subject of interest in subsurface geomicrobiology. While iron reduction and microorganisms involved have been well studied in marine surface sediments, little is known about microorganisms responsible for iron reduction in deep methanic sediments. Here, we used quantitative PCR-based 16S rRNA gene copy numbers and pyrosequencing-based relative abundances of bacteria and archaea to investigate covariance between distinct microbial populations and specific geochemical profiles in the top 5 m of sediment cores from the Helgoland mud area, North Sea. We found that gene copy numbers of bacteria and archaea were specifically higher around the peak of dissolved iron in the methanic zone (250-350 cm). The higher copy numbers at these depths were also reflected by the relative sequence abundances of members of the candidate division JS1, methanogenic and Methanohalobium/ANME-3 related archaea. The distribution of these populations was strongly correlated to the profile of pore-water Fe(2+) while that of Desulfobacteraceae corresponded to the pore-water sulfate profile. Furthermore, specific JS1 populations also strongly co-varied with the distribution of Methanosaetaceae in the methanic zone. Our data suggest that the interplay among JS1 bacteria, methanogenic archaea and Methanohalobium/ANME-3-related archaea may be important for iron reduction and methane cycling in deep methanic sediments of the Helgoland mud area and perhaps in other methane-rich depositional environments.
publishDate 2015
dc.date.none.fl_str_mv 2015
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/109151
http://hdl.handle.net/10316/109151
https://doi.org/10.3389/fmicb.2015.00365
url http://hdl.handle.net/10316/109151
https://doi.org/10.3389/fmicb.2015.00365
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1664-302X
25983723
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Frontiers Media S.A.
publisher.none.fl_str_mv Frontiers Media S.A.
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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