Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression

Detalhes bibliográficos
Autor(a) principal: Cruz, Tiago
Data de Publicação: 2014
Outros Autores: Carvalho, Raquel, Richardson, Dale, Duque, Paula
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/335
Resumo: Serine/arginine-rich (SR) proteins are major modulators of alternative splicing, a key generator of proteomic diversity and flexible means of regulating gene expression likely to be crucial in plant environmental responses. Indeed, mounting evidence implicates splicing factors in signal transduction of the abscisic acid (ABA) phytohormone, which plays pivotal roles in the response to various abiotic stresses. Using real-time RT-qPCR, we analyzed total steady-state transcript levels of the 18 SR and two SR-like genes from Arabidopsis thaliana in seedlings treated with ABA and in genetic backgrounds with altered expression of the ABA-biosynthesis ABA2 and the ABA-signaling ABI1 and ABI4 genes. We also searched for ABA-responsive cis elements in the upstream regions of the 20 genes. We found that members of the plant-specific SC35-Like (SCL) Arabidopsis SR protein subfamily are distinctively responsive to exogenous ABA, while the expression of seven SR and SR-related genes is affected by alterations in key components of the ABA pathway. Finally, despite pervasiveness of established ABA-responsive promoter elements in Arabidopsis SR and SR-like genes, their expression is likely governed by additional, yet unidentified cis-acting elements. Overall, this study pinpoints SR34, SR34b, SCL30a, SCL28, SCL33, RS40, SR45 and SR45a as promising candidates for involvement in ABA-mediated stress responses.
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spelling Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expressionabscisic acid (ABA)ABA-responsive cis elementsalternative splicing (AS)Arabidopsis thalianagene expressionSR proteinsSerine/arginine-rich (SR) proteins are major modulators of alternative splicing, a key generator of proteomic diversity and flexible means of regulating gene expression likely to be crucial in plant environmental responses. Indeed, mounting evidence implicates splicing factors in signal transduction of the abscisic acid (ABA) phytohormone, which plays pivotal roles in the response to various abiotic stresses. Using real-time RT-qPCR, we analyzed total steady-state transcript levels of the 18 SR and two SR-like genes from Arabidopsis thaliana in seedlings treated with ABA and in genetic backgrounds with altered expression of the ABA-biosynthesis ABA2 and the ABA-signaling ABI1 and ABI4 genes. We also searched for ABA-responsive cis elements in the upstream regions of the 20 genes. We found that members of the plant-specific SC35-Like (SCL) Arabidopsis SR protein subfamily are distinctively responsive to exogenous ABA, while the expression of seven SR and SR-related genes is affected by alterations in key components of the ABA pathway. Finally, despite pervasiveness of established ABA-responsive promoter elements in Arabidopsis SR and SR-like genes, their expression is likely governed by additional, yet unidentified cis-acting elements. Overall, this study pinpoints SR34, SR34b, SCL30a, SCL28, SCL33, RS40, SR45 and SR45a as promising candidates for involvement in ABA-mediated stress responses.FCT PostDoctoral Fellowships: SFRH/BPD/80073/2011, SFRH/BPD/81830/2011.MDPIARCACruz, TiagoCarvalho, RaquelRichardson, DaleDuque, Paula2015-10-01T15:23:27Z2014-09-292014-09-29T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/335engCruz, T.M.D.; Carvalho, R.F.; Richardson, D.N.; Duque, P. Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression. Int. J. Mol. Sci. 2014, 15, 17541-17564.10.3390/ijms151017541info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:34:44Zoai:arca.igc.gulbenkian.pt:10400.7/335Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:38.915344Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression
title Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression
spellingShingle Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression
Cruz, Tiago
abscisic acid (ABA)
ABA-responsive cis elements
alternative splicing (AS)
Arabidopsis thaliana
gene expression
SR proteins
title_short Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression
title_full Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression
title_fullStr Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression
title_full_unstemmed Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression
title_sort Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression
author Cruz, Tiago
author_facet Cruz, Tiago
Carvalho, Raquel
Richardson, Dale
Duque, Paula
author_role author
author2 Carvalho, Raquel
Richardson, Dale
Duque, Paula
author2_role author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Cruz, Tiago
Carvalho, Raquel
Richardson, Dale
Duque, Paula
dc.subject.por.fl_str_mv abscisic acid (ABA)
ABA-responsive cis elements
alternative splicing (AS)
Arabidopsis thaliana
gene expression
SR proteins
topic abscisic acid (ABA)
ABA-responsive cis elements
alternative splicing (AS)
Arabidopsis thaliana
gene expression
SR proteins
description Serine/arginine-rich (SR) proteins are major modulators of alternative splicing, a key generator of proteomic diversity and flexible means of regulating gene expression likely to be crucial in plant environmental responses. Indeed, mounting evidence implicates splicing factors in signal transduction of the abscisic acid (ABA) phytohormone, which plays pivotal roles in the response to various abiotic stresses. Using real-time RT-qPCR, we analyzed total steady-state transcript levels of the 18 SR and two SR-like genes from Arabidopsis thaliana in seedlings treated with ABA and in genetic backgrounds with altered expression of the ABA-biosynthesis ABA2 and the ABA-signaling ABI1 and ABI4 genes. We also searched for ABA-responsive cis elements in the upstream regions of the 20 genes. We found that members of the plant-specific SC35-Like (SCL) Arabidopsis SR protein subfamily are distinctively responsive to exogenous ABA, while the expression of seven SR and SR-related genes is affected by alterations in key components of the ABA pathway. Finally, despite pervasiveness of established ABA-responsive promoter elements in Arabidopsis SR and SR-like genes, their expression is likely governed by additional, yet unidentified cis-acting elements. Overall, this study pinpoints SR34, SR34b, SCL30a, SCL28, SCL33, RS40, SR45 and SR45a as promising candidates for involvement in ABA-mediated stress responses.
publishDate 2014
dc.date.none.fl_str_mv 2014-09-29
2014-09-29T00:00:00Z
2015-10-01T15:23:27Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/335
url http://hdl.handle.net/10400.7/335
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Cruz, T.M.D.; Carvalho, R.F.; Richardson, D.N.; Duque, P. Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression. Int. J. Mol. Sci. 2014, 15, 17541-17564.
10.3390/ijms151017541
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
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