Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms

Detalhes bibliográficos
Autor(a) principal: Freitas, Ana Isabel
Data de Publicação: 2014
Outros Autores: Vasconcelos, Carlos, Vilanova, Manuel, Cerca, Nuno
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/32219
Resumo: Biofilm formation is recognized as the main virulence factor in a variety of chronic infections. In vitro evaluation of biofilm formation is often achieved by quantification of viable or total cells. However, these methods depend on biofilm disruption, which is often achieved by vortexing or sonication. In this study, we investigated the effects of sonication on the elimination of Staphylococcus epidermidis cell clusters from biofilms grown over time, and quantification was performed by three distinct analytical techniques. Even when a higher number of sonication cycles was used, some stable cell clusters remained in the samples obtained from 48- and 72-h-old biofilms, interfering with the quantification of sessile bacteria by plate counting. On the other hand, the fluorescence microscopy automatic counting system allowed proper quantification of biofilm samples that had undergone any of the described sonication cycles, suggesting that this is a more accurate method for assessing the cell concentration in S. epidermidis biofilms, especially in mature biofilms.
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spelling Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilmsBiofilmStaphylococcus epidermidisCell clustersSonicationAutomatic cell countingScience & TechnologyBiofilm formation is recognized as the main virulence factor in a variety of chronic infections. In vitro evaluation of biofilm formation is often achieved by quantification of viable or total cells. However, these methods depend on biofilm disruption, which is often achieved by vortexing or sonication. In this study, we investigated the effects of sonication on the elimination of Staphylococcus epidermidis cell clusters from biofilms grown over time, and quantification was performed by three distinct analytical techniques. Even when a higher number of sonication cycles was used, some stable cell clusters remained in the samples obtained from 48- and 72-h-old biofilms, interfering with the quantification of sessile bacteria by plate counting. On the other hand, the fluorescence microscopy automatic counting system allowed proper quantification of biofilm samples that had undergone any of the described sonication cycles, suggesting that this is a more accurate method for assessing the cell concentration in S. epidermidis biofilms, especially in mature biofilms.This work was funded by the Fundacao para a Ciencia e a Tecnologia (FCT) and the COMPETE grants PTDC/BIA-MIC/113450/2009 and FCOMP-01-0124-FEDER-014309.John Wiley and SonsUniversidade do MinhoFreitas, Ana IsabelVasconcelos, CarlosVilanova, ManuelCerca, Nuno20142014-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/32219engFreitas, Ana Isabel; Vasconcelos, Carlos; Vilanova, Manuel; Cerca, Nuno, Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms. Journal of Basic Microbiology, 54(7), 750-757, 20140233-111X1521-402810.1002/jobm.20120060323686681info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:47:53Zoai:repositorium.sdum.uminho.pt:1822/32219Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:46:01.326922Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms
title Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms
spellingShingle Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms
Freitas, Ana Isabel
Biofilm
Staphylococcus epidermidis
Cell clusters
Sonication
Automatic cell counting
Science & Technology
title_short Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms
title_full Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms
title_fullStr Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms
title_full_unstemmed Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms
title_sort Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms
author Freitas, Ana Isabel
author_facet Freitas, Ana Isabel
Vasconcelos, Carlos
Vilanova, Manuel
Cerca, Nuno
author_role author
author2 Vasconcelos, Carlos
Vilanova, Manuel
Cerca, Nuno
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Freitas, Ana Isabel
Vasconcelos, Carlos
Vilanova, Manuel
Cerca, Nuno
dc.subject.por.fl_str_mv Biofilm
Staphylococcus epidermidis
Cell clusters
Sonication
Automatic cell counting
Science & Technology
topic Biofilm
Staphylococcus epidermidis
Cell clusters
Sonication
Automatic cell counting
Science & Technology
description Biofilm formation is recognized as the main virulence factor in a variety of chronic infections. In vitro evaluation of biofilm formation is often achieved by quantification of viable or total cells. However, these methods depend on biofilm disruption, which is often achieved by vortexing or sonication. In this study, we investigated the effects of sonication on the elimination of Staphylococcus epidermidis cell clusters from biofilms grown over time, and quantification was performed by three distinct analytical techniques. Even when a higher number of sonication cycles was used, some stable cell clusters remained in the samples obtained from 48- and 72-h-old biofilms, interfering with the quantification of sessile bacteria by plate counting. On the other hand, the fluorescence microscopy automatic counting system allowed proper quantification of biofilm samples that had undergone any of the described sonication cycles, suggesting that this is a more accurate method for assessing the cell concentration in S. epidermidis biofilms, especially in mature biofilms.
publishDate 2014
dc.date.none.fl_str_mv 2014
2014-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/32219
url http://hdl.handle.net/1822/32219
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Freitas, Ana Isabel; Vasconcelos, Carlos; Vilanova, Manuel; Cerca, Nuno, Optimization of an automatic counting system for the quantification of Staphylococcus epidermidis cells in biofilms. Journal of Basic Microbiology, 54(7), 750-757, 2014
0233-111X
1521-4028
10.1002/jobm.201200603
23686681
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv John Wiley and Sons
publisher.none.fl_str_mv John Wiley and Sons
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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