Additional value of a combined genetic risk score to standard cardiovascular stratification

Detalhes bibliográficos
Autor(a) principal: Pereira, Andreia Micaela
Data de Publicação: 2018
Outros Autores: Mendonca, Maria Isabel, Borges, Sofia, Sousa, Ana Célia, Freitas, Sónia, Henriques, Eva, Rodrigues, Mariana, Freitas, Ana Isabel, Guerra, Graça, Freitas, Carolina, Pereira, Décio, Brehm, António, Dos Reis, Roberto Palma
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://doi.org/10.1590/1678-4685-gmb-2017-0173
Resumo: The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.
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spelling Additional value of a combined genetic risk score to standard cardiovascular stratificationCoronary artery diseaseFramingham scoreGenetic risk scoreRisk factorsRisk predictionMolecular BiologyGeneticsSDG 3 - Good Health and Well-beingThe utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.NOVA Medical School|Faculdade de Ciências Médicas (NMS|FCM)RUNPereira, Andreia MicaelaMendonca, Maria IsabelBorges, SofiaSousa, Ana CéliaFreitas, SóniaHenriques, EvaRodrigues, MarianaFreitas, Ana IsabelGuerra, GraçaFreitas, CarolinaPereira, DécioBrehm, AntónioDos Reis, Roberto Palma2019-01-03T14:45:36Z2018-10-012018-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article9application/pdfhttps://doi.org/10.1590/1678-4685-gmb-2017-0173eng1415-4757PURE: 11102505http://www.scopus.com/inward/record.url?scp=85058932229&partnerID=8YFLogxKhttps://doi.org/10.1590/1678-4685-gmb-2017-0173info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:27:08Zoai:run.unl.pt:10362/56379Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:32:53.926674Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Additional value of a combined genetic risk score to standard cardiovascular stratification
title Additional value of a combined genetic risk score to standard cardiovascular stratification
spellingShingle Additional value of a combined genetic risk score to standard cardiovascular stratification
Pereira, Andreia Micaela
Coronary artery disease
Framingham score
Genetic risk score
Risk factors
Risk prediction
Molecular Biology
Genetics
SDG 3 - Good Health and Well-being
title_short Additional value of a combined genetic risk score to standard cardiovascular stratification
title_full Additional value of a combined genetic risk score to standard cardiovascular stratification
title_fullStr Additional value of a combined genetic risk score to standard cardiovascular stratification
title_full_unstemmed Additional value of a combined genetic risk score to standard cardiovascular stratification
title_sort Additional value of a combined genetic risk score to standard cardiovascular stratification
author Pereira, Andreia Micaela
author_facet Pereira, Andreia Micaela
Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Dos Reis, Roberto Palma
author_role author
author2 Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Dos Reis, Roberto Palma
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv NOVA Medical School|Faculdade de Ciências Médicas (NMS|FCM)
RUN
dc.contributor.author.fl_str_mv Pereira, Andreia Micaela
Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Dos Reis, Roberto Palma
dc.subject.por.fl_str_mv Coronary artery disease
Framingham score
Genetic risk score
Risk factors
Risk prediction
Molecular Biology
Genetics
SDG 3 - Good Health and Well-being
topic Coronary artery disease
Framingham score
Genetic risk score
Risk factors
Risk prediction
Molecular Biology
Genetics
SDG 3 - Good Health and Well-being
description The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.
publishDate 2018
dc.date.none.fl_str_mv 2018-10-01
2018-10-01T00:00:00Z
2019-01-03T14:45:36Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv https://doi.org/10.1590/1678-4685-gmb-2017-0173
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1415-4757
PURE: 11102505
http://www.scopus.com/inward/record.url?scp=85058932229&partnerID=8YFLogxK
https://doi.org/10.1590/1678-4685-gmb-2017-0173
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 9
application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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