Additional value of a combined genetic risk score to standard cardiovascular stratification
Autor(a) principal: | |
---|---|
Data de Publicação: | 2018 |
Outros Autores: | , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.26/27896 |
Resumo: | The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk. |
id |
RCAP_e2bca310f62abf604e07e8127d79256c |
---|---|
oai_identifier_str |
oai:comum.rcaap.pt:10400.26/27896 |
network_acronym_str |
RCAP |
network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository_id_str |
7160 |
spelling |
Additional value of a combined genetic risk score to standard cardiovascular stratificationCoronary artery diseasegenetic risk scoreFramingham scorerisk predictionrisk factorsPortugalMadeira IslandThe utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.Sociedade Brasileira de GenéticaRepositório ComumPereira, AndreiaMendonca, Maria IsabelBorges, SofiaSousa, Ana CéliaFreitas, SóniaHenriques, EvaRodrigues, MarianaFreitas, Ana IsabelGuerra, GraçaFreitas, CarolinaPereira, DécioBrehm, AntónioPalma dos Reis, Roberto2019-02-21T11:23:28Z20182018-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.26/27896engPereira, A., Mendonca, M. I., Borges, S., Sousa, A. C., Freitas, S., Henriques, E., ... & Pereira, D. (2018). Additional value of a combined genetic risk score to standard cardiovascular stratification. Genetics and molecular biology, 41(4), 766-774.10.1590/1678-4685-GMB-2017-0173info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-10T02:16:07Zoai:comum.rcaap.pt:10400.26/27896Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T22:34:18.882890Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Additional value of a combined genetic risk score to standard cardiovascular stratification |
title |
Additional value of a combined genetic risk score to standard cardiovascular stratification |
spellingShingle |
Additional value of a combined genetic risk score to standard cardiovascular stratification Pereira, Andreia Coronary artery disease genetic risk score Framingham score risk prediction risk factors Portugal Madeira Island |
title_short |
Additional value of a combined genetic risk score to standard cardiovascular stratification |
title_full |
Additional value of a combined genetic risk score to standard cardiovascular stratification |
title_fullStr |
Additional value of a combined genetic risk score to standard cardiovascular stratification |
title_full_unstemmed |
Additional value of a combined genetic risk score to standard cardiovascular stratification |
title_sort |
Additional value of a combined genetic risk score to standard cardiovascular stratification |
author |
Pereira, Andreia |
author_facet |
Pereira, Andreia Mendonca, Maria Isabel Borges, Sofia Sousa, Ana Célia Freitas, Sónia Henriques, Eva Rodrigues, Mariana Freitas, Ana Isabel Guerra, Graça Freitas, Carolina Pereira, Décio Brehm, António Palma dos Reis, Roberto |
author_role |
author |
author2 |
Mendonca, Maria Isabel Borges, Sofia Sousa, Ana Célia Freitas, Sónia Henriques, Eva Rodrigues, Mariana Freitas, Ana Isabel Guerra, Graça Freitas, Carolina Pereira, Décio Brehm, António Palma dos Reis, Roberto |
author2_role |
author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório Comum |
dc.contributor.author.fl_str_mv |
Pereira, Andreia Mendonca, Maria Isabel Borges, Sofia Sousa, Ana Célia Freitas, Sónia Henriques, Eva Rodrigues, Mariana Freitas, Ana Isabel Guerra, Graça Freitas, Carolina Pereira, Décio Brehm, António Palma dos Reis, Roberto |
dc.subject.por.fl_str_mv |
Coronary artery disease genetic risk score Framingham score risk prediction risk factors Portugal Madeira Island |
topic |
Coronary artery disease genetic risk score Framingham score risk prediction risk factors Portugal Madeira Island |
description |
The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018 2018-01-01T00:00:00Z 2019-02-21T11:23:28Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.26/27896 |
url |
http://hdl.handle.net/10400.26/27896 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Pereira, A., Mendonca, M. I., Borges, S., Sousa, A. C., Freitas, S., Henriques, E., ... & Pereira, D. (2018). Additional value of a combined genetic risk score to standard cardiovascular stratification. Genetics and molecular biology, 41(4), 766-774. 10.1590/1678-4685-GMB-2017-0173 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
_version_ |
1799134905652740096 |