Additional value of a combined genetic risk score to standard cardiovascular stratification

Detalhes bibliográficos
Autor(a) principal: Pereira, Andreia
Data de Publicação: 2018
Outros Autores: Mendonca, Maria Isabel, Borges, Sofia, Sousa, Ana Célia, Freitas, Sónia, Henriques, Eva, Rodrigues, Mariana, Freitas, Ana Isabel, Guerra, Graça, Freitas, Carolina, Pereira, Décio, Brehm, António, Palma dos Reis, Roberto
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.26/27896
Resumo: The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.
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spelling Additional value of a combined genetic risk score to standard cardiovascular stratificationCoronary artery diseasegenetic risk scoreFramingham scorerisk predictionrisk factorsPortugalMadeira IslandThe utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.Sociedade Brasileira de GenéticaRepositório ComumPereira, AndreiaMendonca, Maria IsabelBorges, SofiaSousa, Ana CéliaFreitas, SóniaHenriques, EvaRodrigues, MarianaFreitas, Ana IsabelGuerra, GraçaFreitas, CarolinaPereira, DécioBrehm, AntónioPalma dos Reis, Roberto2019-02-21T11:23:28Z20182018-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.26/27896engPereira, A., Mendonca, M. I., Borges, S., Sousa, A. C., Freitas, S., Henriques, E., ... & Pereira, D. (2018). Additional value of a combined genetic risk score to standard cardiovascular stratification. Genetics and molecular biology, 41(4), 766-774.10.1590/1678-4685-GMB-2017-0173info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-10T02:16:07Zoai:comum.rcaap.pt:10400.26/27896Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T22:34:18.882890Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Additional value of a combined genetic risk score to standard cardiovascular stratification
title Additional value of a combined genetic risk score to standard cardiovascular stratification
spellingShingle Additional value of a combined genetic risk score to standard cardiovascular stratification
Pereira, Andreia
Coronary artery disease
genetic risk score
Framingham score
risk prediction
risk factors
Portugal
Madeira Island
title_short Additional value of a combined genetic risk score to standard cardiovascular stratification
title_full Additional value of a combined genetic risk score to standard cardiovascular stratification
title_fullStr Additional value of a combined genetic risk score to standard cardiovascular stratification
title_full_unstemmed Additional value of a combined genetic risk score to standard cardiovascular stratification
title_sort Additional value of a combined genetic risk score to standard cardiovascular stratification
author Pereira, Andreia
author_facet Pereira, Andreia
Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Palma dos Reis, Roberto
author_role author
author2 Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Palma dos Reis, Roberto
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Comum
dc.contributor.author.fl_str_mv Pereira, Andreia
Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Palma dos Reis, Roberto
dc.subject.por.fl_str_mv Coronary artery disease
genetic risk score
Framingham score
risk prediction
risk factors
Portugal
Madeira Island
topic Coronary artery disease
genetic risk score
Framingham score
risk prediction
risk factors
Portugal
Madeira Island
description The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.
publishDate 2018
dc.date.none.fl_str_mv 2018
2018-01-01T00:00:00Z
2019-02-21T11:23:28Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.26/27896
url http://hdl.handle.net/10400.26/27896
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Pereira, A., Mendonca, M. I., Borges, S., Sousa, A. C., Freitas, S., Henriques, E., ... & Pereira, D. (2018). Additional value of a combined genetic risk score to standard cardiovascular stratification. Genetics and molecular biology, 41(4), 766-774.
10.1590/1678-4685-GMB-2017-0173
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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