Additional value of a combined genetic risk score to standard cardiovascular stratification

Detalhes bibliográficos
Autor(a) principal: Pereira,Andreia
Data de Publicação: 2018
Outros Autores: Mendonca,Maria Isabel, Borges,Sofia, Sousa,Ana Célia, Freitas,Sónia, Henriques,Eva, Rodrigues,Mariana, Freitas,Ana Isabel, Guerra,Graça, Freitas,Carolina, Pereira,Décio, Brehm,António, Reis,Roberto Palma Dos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572018000500766
Resumo: Abstract The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.
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spelling Additional value of a combined genetic risk score to standard cardiovascular stratificationCoronary artery diseasegenetic risk scoreFramingham scorerisk predictionrisk factorsAbstract The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.Sociedade Brasileira de Genética2018-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572018000500766Genetics and Molecular Biology v.41 n.4 2018reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2017-0173info:eu-repo/semantics/openAccessPereira,AndreiaMendonca,Maria IsabelBorges,SofiaSousa,Ana CéliaFreitas,SóniaHenriques,EvaRodrigues,MarianaFreitas,Ana IsabelGuerra,GraçaFreitas,CarolinaPereira,DécioBrehm,AntónioReis,Roberto Palma Doseng2019-01-14T00:00:00Zoai:scielo:S1415-47572018000500766Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2019-01-14T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Additional value of a combined genetic risk score to standard cardiovascular stratification
title Additional value of a combined genetic risk score to standard cardiovascular stratification
spellingShingle Additional value of a combined genetic risk score to standard cardiovascular stratification
Pereira,Andreia
Coronary artery disease
genetic risk score
Framingham score
risk prediction
risk factors
title_short Additional value of a combined genetic risk score to standard cardiovascular stratification
title_full Additional value of a combined genetic risk score to standard cardiovascular stratification
title_fullStr Additional value of a combined genetic risk score to standard cardiovascular stratification
title_full_unstemmed Additional value of a combined genetic risk score to standard cardiovascular stratification
title_sort Additional value of a combined genetic risk score to standard cardiovascular stratification
author Pereira,Andreia
author_facet Pereira,Andreia
Mendonca,Maria Isabel
Borges,Sofia
Sousa,Ana Célia
Freitas,Sónia
Henriques,Eva
Rodrigues,Mariana
Freitas,Ana Isabel
Guerra,Graça
Freitas,Carolina
Pereira,Décio
Brehm,António
Reis,Roberto Palma Dos
author_role author
author2 Mendonca,Maria Isabel
Borges,Sofia
Sousa,Ana Célia
Freitas,Sónia
Henriques,Eva
Rodrigues,Mariana
Freitas,Ana Isabel
Guerra,Graça
Freitas,Carolina
Pereira,Décio
Brehm,António
Reis,Roberto Palma Dos
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Pereira,Andreia
Mendonca,Maria Isabel
Borges,Sofia
Sousa,Ana Célia
Freitas,Sónia
Henriques,Eva
Rodrigues,Mariana
Freitas,Ana Isabel
Guerra,Graça
Freitas,Carolina
Pereira,Décio
Brehm,António
Reis,Roberto Palma Dos
dc.subject.por.fl_str_mv Coronary artery disease
genetic risk score
Framingham score
risk prediction
risk factors
topic Coronary artery disease
genetic risk score
Framingham score
risk prediction
risk factors
description Abstract The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572018000500766
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572018000500766
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-gmb-2017-0173
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.41 n.4 2018
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
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instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
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