Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX

Detalhes bibliográficos
Autor(a) principal: Meirinho, Sofia G.
Data de Publicação: 2017
Outros Autores: Dias, L.G., Peres, António M., Rodrigues, Lígia R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10198/20641
Resumo: A DNA aptamer with affinity and specificity for human osteopontin (OPN), a potential breast cancer biomarker, was selected using the SELEX process, considering its homology rate and the stability of its secondary structures. This aptamer exhibited a satisfactory affinity towards OPN, showing dissociation constants lower than 2.5 nM. It was further used to develop a simple, label-free electrochemical aptasensor against OPN. The aptasensor showed good sensitivity towards OPN in standard solutions, being the square wave voltammetry (SWV), compared to the cyclic voltammetry, the most sensitive technique with detection and quantification limits of 1.4 ± 0.4 nM and 4.2 ± 1.1 nM, respectively. It showed good reproducibility and acceptable selectivity, exhibiting low signal interferences from other proteins, as thrombin, with 2.6-10 times lower current signals-off than for OPN. The aptasensor also successfully detected OPN in spiked synthetic human plasma. Using SWV, detection and quantification limits (1.3 ± 0.1 and 3.9 ± 0.4 nM) within the OPN plasma levels reported for patients with breast cancer (0.4-4.5 nM) or with metastatic or recurrent breast cancer (0.9-8.4 nM) were found. Moreover, preliminary assays, using a sample of human plasma, showed that the aptasensor and the standard ELISA method quantified similar OPN levels (2.2 ± 0.7 and 1.7 ± 0.1 nM, respectively). Thus, our aptasensor coupled with SWV represents a promising alternative for the detection of relevant breast cancer biomarkers.
id RCAP_b140c85a5defc9ac27233b5d00cd9238
oai_identifier_str oai:bibliotecadigital.ipb.pt:10198/20641
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEXBreast neoplasmsGoldHumansOsteopontinReproducibility of resultsAptamersBiosensing techniquesElectrochemical techniquesA DNA aptamer with affinity and specificity for human osteopontin (OPN), a potential breast cancer biomarker, was selected using the SELEX process, considering its homology rate and the stability of its secondary structures. This aptamer exhibited a satisfactory affinity towards OPN, showing dissociation constants lower than 2.5 nM. It was further used to develop a simple, label-free electrochemical aptasensor against OPN. The aptasensor showed good sensitivity towards OPN in standard solutions, being the square wave voltammetry (SWV), compared to the cyclic voltammetry, the most sensitive technique with detection and quantification limits of 1.4 ± 0.4 nM and 4.2 ± 1.1 nM, respectively. It showed good reproducibility and acceptable selectivity, exhibiting low signal interferences from other proteins, as thrombin, with 2.6-10 times lower current signals-off than for OPN. The aptasensor also successfully detected OPN in spiked synthetic human plasma. Using SWV, detection and quantification limits (1.3 ± 0.1 and 3.9 ± 0.4 nM) within the OPN plasma levels reported for patients with breast cancer (0.4-4.5 nM) or with metastatic or recurrent breast cancer (0.9-8.4 nM) were found. Moreover, preliminary assays, using a sample of human plasma, showed that the aptasensor and the standard ELISA method quantified similar OPN levels (2.2 ± 0.7 and 1.7 ± 0.1 nM, respectively). Thus, our aptasensor coupled with SWV represents a promising alternative for the detection of relevant breast cancer biomarkers.The authors acknowledge the financial support from the Strategic funding of UID/BIO/04469/2013 unit and COMPETE 2020 (POCI-01-0145-FEDER-006684), and from project BioTecNorte (project number NORTE-01-0145-FEDER-000004). This work was also financially supported by Project POCI-01e0145-FEDER-006984 e Associate Laboratory LSRE-LCM and by Project UID/QUI/00616/ 2013 e CQ-VR both funded by FEDER - Fundo Europeu de Desenvolvimento Regional through COMPETE2020 - Programa Operacional Competitividade e Internacionalização (POCI) e and by national funds through FCT - Fundaç~ao para a Ciência e a Tecnologia, Portugal. S. Meirinho also acknowledges the research grant provided by Project UID/EQU/50020/2013.Biblioteca Digital do IPBMeirinho, Sofia G.Dias, L.G.Peres, António M.Rodrigues, Lígia R.2020-02-21T15:49:13Z20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10198/20641engMeirinho, Sofia G.; Dias, L.G.; Peres, António M.; Rodrigues, Lígia R. (2017). Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX. Analytica Chimica Acta. ISSN 0003-2670. 987, p. 25-370003-267010.1016/j.aca.2017.07.071info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-21T10:46:51Zoai:bibliotecadigital.ipb.pt:10198/20641Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:11:32.820168Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
spellingShingle Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
Meirinho, Sofia G.
Breast neoplasms
Gold
Humans
Osteopontin
Reproducibility of results
Aptamers
Biosensing techniques
Electrochemical techniques
title_short Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title_full Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title_fullStr Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title_full_unstemmed Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title_sort Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
author Meirinho, Sofia G.
author_facet Meirinho, Sofia G.
Dias, L.G.
Peres, António M.
Rodrigues, Lígia R.
author_role author
author2 Dias, L.G.
Peres, António M.
Rodrigues, Lígia R.
author2_role author
author
author
dc.contributor.none.fl_str_mv Biblioteca Digital do IPB
dc.contributor.author.fl_str_mv Meirinho, Sofia G.
Dias, L.G.
Peres, António M.
Rodrigues, Lígia R.
dc.subject.por.fl_str_mv Breast neoplasms
Gold
Humans
Osteopontin
Reproducibility of results
Aptamers
Biosensing techniques
Electrochemical techniques
topic Breast neoplasms
Gold
Humans
Osteopontin
Reproducibility of results
Aptamers
Biosensing techniques
Electrochemical techniques
description A DNA aptamer with affinity and specificity for human osteopontin (OPN), a potential breast cancer biomarker, was selected using the SELEX process, considering its homology rate and the stability of its secondary structures. This aptamer exhibited a satisfactory affinity towards OPN, showing dissociation constants lower than 2.5 nM. It was further used to develop a simple, label-free electrochemical aptasensor against OPN. The aptasensor showed good sensitivity towards OPN in standard solutions, being the square wave voltammetry (SWV), compared to the cyclic voltammetry, the most sensitive technique with detection and quantification limits of 1.4 ± 0.4 nM and 4.2 ± 1.1 nM, respectively. It showed good reproducibility and acceptable selectivity, exhibiting low signal interferences from other proteins, as thrombin, with 2.6-10 times lower current signals-off than for OPN. The aptasensor also successfully detected OPN in spiked synthetic human plasma. Using SWV, detection and quantification limits (1.3 ± 0.1 and 3.9 ± 0.4 nM) within the OPN plasma levels reported for patients with breast cancer (0.4-4.5 nM) or with metastatic or recurrent breast cancer (0.9-8.4 nM) were found. Moreover, preliminary assays, using a sample of human plasma, showed that the aptasensor and the standard ELISA method quantified similar OPN levels (2.2 ± 0.7 and 1.7 ± 0.1 nM, respectively). Thus, our aptasensor coupled with SWV represents a promising alternative for the detection of relevant breast cancer biomarkers.
publishDate 2017
dc.date.none.fl_str_mv 2017
2017-01-01T00:00:00Z
2020-02-21T15:49:13Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10198/20641
url http://hdl.handle.net/10198/20641
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Meirinho, Sofia G.; Dias, L.G.; Peres, António M.; Rodrigues, Lígia R. (2017). Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX. Analytica Chimica Acta. ISSN 0003-2670. 987, p. 25-37
0003-2670
10.1016/j.aca.2017.07.071
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799135383625138176