Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX

Detalhes bibliográficos
Autor(a) principal: Meirinho, S.
Data de Publicação: 2017
Outros Autores: Dias, Luís G., Peres, António M., Rodrigues, L. R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/46572
Resumo: A DNA aptamer with affinity and specificity for human osteopontin (OPN), a potential breast cancer biomarker, was selected using the SELEX process, considering its homology rate and the stability of its secondary structures. This aptamer exhibited a satisfactory affinity towards OPN, showing dissociation constants lower than 2.5 nM. It was further used to develop a simple, label-free electrochemical aptasensor against OPN. The aptasensor showed good sensitivity towards OPN in standard solutions, being the square wave voltammetry (SWV), compared to the cyclic voltammetry, the most sensitive technique with detection and quantification limits of 1.4 ± 0.4 nM and 4.2 ± 1.1 nM, respectively. It showed good reproducibility and acceptable selectivity, exhibiting low signal interferences from other proteins, as thrombin, with 2.610 times lower current signals-off than for OPN. The aptasensor also successfully detected OPN in spiked synthetic human plasma. Using SWV, detection and quantification limits (1.3 ± 0.1 and 3.9 ± 0.4 nM) within the OPN plasma levels reported for patients with breast cancer (0.44.5 nM) or with metastatic or recurrent breast cancer (0.98.4 nM) were found. Moreover, preliminary assays, using a sample of human plasma, showed that the aptasensor and the standard ELISA method quantified similar OPN levels (2.2 ± 0.7 and 1.7 ± 0.1 nM, respectively). Thus, our aptasensor coupled with SWV represents a promising alternative for the detection of relevant breast cancer biomarkers.
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spelling Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEXOsteopontinSELEXDNA aptamersScreen-printed gold electrodeElectrochemical aptasensorScience & TechnologyA DNA aptamer with affinity and specificity for human osteopontin (OPN), a potential breast cancer biomarker, was selected using the SELEX process, considering its homology rate and the stability of its secondary structures. This aptamer exhibited a satisfactory affinity towards OPN, showing dissociation constants lower than 2.5 nM. It was further used to develop a simple, label-free electrochemical aptasensor against OPN. The aptasensor showed good sensitivity towards OPN in standard solutions, being the square wave voltammetry (SWV), compared to the cyclic voltammetry, the most sensitive technique with detection and quantification limits of 1.4 ± 0.4 nM and 4.2 ± 1.1 nM, respectively. It showed good reproducibility and acceptable selectivity, exhibiting low signal interferences from other proteins, as thrombin, with 2.610 times lower current signals-off than for OPN. The aptasensor also successfully detected OPN in spiked synthetic human plasma. Using SWV, detection and quantification limits (1.3 ± 0.1 and 3.9 ± 0.4 nM) within the OPN plasma levels reported for patients with breast cancer (0.44.5 nM) or with metastatic or recurrent breast cancer (0.98.4 nM) were found. Moreover, preliminary assays, using a sample of human plasma, showed that the aptasensor and the standard ELISA method quantified similar OPN levels (2.2 ± 0.7 and 1.7 ± 0.1 nM, respectively). Thus, our aptasensor coupled with SWV represents a promising alternative for the detection of relevant breast cancer biomarkers.The authors acknowledge the financial support from the Strategic funding of UID/BIO/04469/2013 unit and COMPETE 2020 (POCI-01-0145-FEDER-006684), and from project BioTecNorte (project number NORTE-01-0145-FEDER-000004). This work was also financially supported by Project POCI-01–0145-FEDER-006984 – Associate Laboratory LSRE-LCM and by Project UID/QUI/00616/2013 – CQ-VR both funded by FEDER - Fundo Europeu de Desenvolvimento Regional through COMPETE2020 - Programa Operacional Competitividade e Internacionalização (POCI) – and by national funds through FCT - Fundação para a Ciência e a Tecnologia, Portugal. S. Meirinho also acknowledges the research grant provided by Project UID/EQU/50020/2013.info:eu-repo/semantics/publishedVersionElsevierUniversidade do MinhoMeirinho, S.Dias, Luís G.Peres, António M.Rodrigues, L. R.2017-09-222017-09-22T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/46572engMeirinho, S.; Dias, Luís G.; Peres, António M.; Rodrigues, Lígia R., Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX. Analytica Chimica Acta, 987, 25-37, 20170003-26701873-432410.1016/j.aca.2017.07.07128916037http://www.elsevier.com/locate/issn/00032670info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:19:50Zoai:repositorium.sdum.uminho.pt:1822/46572Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:12:51.609386Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
spellingShingle Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
Meirinho, S.
Osteopontin
SELEX
DNA aptamers
Screen-printed gold electrode
Electrochemical aptasensor
Science & Technology
title_short Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title_full Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title_fullStr Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title_full_unstemmed Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
title_sort Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX
author Meirinho, S.
author_facet Meirinho, S.
Dias, Luís G.
Peres, António M.
Rodrigues, L. R.
author_role author
author2 Dias, Luís G.
Peres, António M.
Rodrigues, L. R.
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Meirinho, S.
Dias, Luís G.
Peres, António M.
Rodrigues, L. R.
dc.subject.por.fl_str_mv Osteopontin
SELEX
DNA aptamers
Screen-printed gold electrode
Electrochemical aptasensor
Science & Technology
topic Osteopontin
SELEX
DNA aptamers
Screen-printed gold electrode
Electrochemical aptasensor
Science & Technology
description A DNA aptamer with affinity and specificity for human osteopontin (OPN), a potential breast cancer biomarker, was selected using the SELEX process, considering its homology rate and the stability of its secondary structures. This aptamer exhibited a satisfactory affinity towards OPN, showing dissociation constants lower than 2.5 nM. It was further used to develop a simple, label-free electrochemical aptasensor against OPN. The aptasensor showed good sensitivity towards OPN in standard solutions, being the square wave voltammetry (SWV), compared to the cyclic voltammetry, the most sensitive technique with detection and quantification limits of 1.4 ± 0.4 nM and 4.2 ± 1.1 nM, respectively. It showed good reproducibility and acceptable selectivity, exhibiting low signal interferences from other proteins, as thrombin, with 2.610 times lower current signals-off than for OPN. The aptasensor also successfully detected OPN in spiked synthetic human plasma. Using SWV, detection and quantification limits (1.3 ± 0.1 and 3.9 ± 0.4 nM) within the OPN plasma levels reported for patients with breast cancer (0.44.5 nM) or with metastatic or recurrent breast cancer (0.98.4 nM) were found. Moreover, preliminary assays, using a sample of human plasma, showed that the aptasensor and the standard ELISA method quantified similar OPN levels (2.2 ± 0.7 and 1.7 ± 0.1 nM, respectively). Thus, our aptasensor coupled with SWV represents a promising alternative for the detection of relevant breast cancer biomarkers.
publishDate 2017
dc.date.none.fl_str_mv 2017-09-22
2017-09-22T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/46572
url http://hdl.handle.net/1822/46572
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Meirinho, S.; Dias, Luís G.; Peres, António M.; Rodrigues, Lígia R., Electrochemical aptasensor for human osteopontin detection using a DNA aptamer selected by SELEX. Analytica Chimica Acta, 987, 25-37, 2017
0003-2670
1873-4324
10.1016/j.aca.2017.07.071
28916037
http://www.elsevier.com/locate/issn/00032670
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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